- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Test data path like ".*/testdata/.*" 34 files: pathology/dicom_proxy/testdata/mock_jpeg_dicom.json pathology/transformation_pipeline/testdata/expected_svs_metadata.json pathology/transformation_pipeline/testdata/example_schema_wsi.json pathology/transformation_pipeline/testdata/layer_config_valid.yaml pathology/transformation_pipeline/testdata/expected_test_person_metadata_column_values.json pathology/transformation_pipeline/testdata/layer_config_invalid_value.yaml pathology/transformation_pipeline/testdata/example_schema_slide_coordinates.json pathology/transformation_pipeline/testdata/start_local/mount_temp_test.json pathology/transformation_pipeline/testdata/start_local/log_environment_variables.txt pathology/transformation_pipeline/testdata/start_local/mount_fs_test.json pathology/transformation_pipeline/testdata/start_local/env_test.json pathology/transformation_pipeline/testdata/layer_config_invalid_string_value.json pathology/transformation_pipeline/testdata/layer_config_invalid_empty.yaml pathology/transformation_pipeline/testdata/openslide_dicom_json/metadata_free.json pathology/transformation_pipeline/testdata/openslide_dicom_json/full_metadata.json pathology/transformation_pipeline/testdata/openslide_dicom_json/create_missing_study_uid_and_init_series_from_metadata.json pathology/transformation_pipeline/testdata/expected_metadata_column_names.json pathology/transformation_pipeline/testdata/layer_config_invalid_json.txt pathology/transformation_pipeline/testdata/wsi_dicom_json/derived_anclillary.json pathology/transformation_pipeline/testdata/wsi_dicom_json/non_wsi_dicom_ingest.json pathology/transformation_pipeline/testdata/wsi_dicom_json/derived_volume_with_downsampled_instance.json pathology/transformation_pipeline/testdata/wsi_dicom_json/derived_volume.json pathology/transformation_pipeline/testdata/pubsub_msgs/invalid_inference_pubsub_config.json pathology/transformation_pipeline/testdata/pubsub_msgs/inference_pubsub_config.json pathology/transformation_pipeline/testdata/root_level_vl_wsi_tags_to_copy.json pathology/transformation_pipeline/testdata/example_schema_microscopic_image.json pathology/transformation_pipeline/testdata/layer_config_valid.json pathology/transformation_pipeline/testdata/layer_config_invalid_dashes.yaml pathology/transformation_pipeline/testdata/layer_config_invalid_key.yaml pathology/transformation_pipeline/testdata/expected_metadata_column_values.json pathology/transformation_pipeline/testdata/bucket/expected_vl_whole_slide_microscopy_image_storage.json pathology/transformation_pipeline/testdata/bucket/expected_vl_slide-coordinates_microscopic_image_storage.json ilm/testdata/config.json ilm/testdata/invalid_config.json - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Documentation path like ".*/docs/.*" 7 files: pathology/dicom_proxy/docs/dicom_proxy_configuration.md pathology/dicom_proxy/docs/dicom_proxy_api.md pathology/transformation_pipeline/docs/digital_pathology_transformation_pipeline_to_dicom.md pathology/transformation_pipeline/docs/joining_wsi_imaging_with_metadata.md pathology/transformation_pipeline/docs/digital_pathology_transformation_pipeline_to_dicom_spec.md pathology/transformation_pipeline/docs/wsi_pyramid_downsampling_configuration.md pathology/transformation_pipeline/docs/transform_pipeline_metadata_values_and_schema.md - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Too long lines (1000+ characters) 4 files: pathology/dicom_proxy/testdata/mock_annotation_dicom.json pathology/transformation_pipeline/ingestion_lib/dicom_util/spec/dicom_tables_part_3.json pathology/transformation_pipeline/ingestion_lib/dicom_util/spec/dicom_tables_part_1.json pathology/transformation_pipeline/testdata/start_local/expected_shellscript.sh - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Hidden files and folders path like ".*/[.][a-zA-Z0-9_]+.*" 3 files: .gitignore pathology/viewer/.editorconfig pathology/viewer/.dockerignore - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Sokrates conventions and configurations path like ".*/sokrates_.*?[.]json" 1 files: sokrates_conventions.json - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Too many lines (10000) 1 files: pathology/viewer/src/utils/dicom_tags_spec.ts - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Git history path like ".*/git[-]history[.]txt" 1 files: git-history.txt - 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