Path	Lines of Code
src/__init__.py	1
src/analysis/notebook_utils.py	135
src/analysis/parsers.py	383
src/analysis/residue_constants.py	678
src/analysis/utils.py	29
src/backend/main.py	320
src/backend/settings.py	3
src/backend/templates/index.html	16
src/components/__init__.py	9
src/components/aggregate_features.py	43
src/components/alphafold_utils.py	464
src/components/configure_run.py	64
src/components/data_pipeline.py	74
src/components/hhblits.py	40
src/components/hhsearch.py	54
src/components/hmmsearch.py	50
src/components/jackhmmer.py	38
src/components/model_predict.py	48
src/components/predict_relax.py	53
src/components/relax_protein.py	43
src/components/version.py	1
src/config.py	32
src/frontend/index.html	13
src/frontend/src/App.tsx	107
src/frontend/src/JobResults.tsx	227
src/frontend/src/NewJob.tsx	489
src/frontend/src/common/CommonFunctions.ts	117
src/frontend/src/common/StringSet.ts	44
src/frontend/src/components/GoogleSignInButton.tsx	81
src/frontend/src/components/ResponsiveAppBar.tsx	74
src/frontend/src/components/SimpleDialog.tsx	72
src/frontend/src/index.css	57
src/frontend/src/main.tsx	4
src/frontend/vite.config.ts	5
src/pipelines/__init__.py	1
src/pipelines/alphafold_inference_pipeline.py	108
src/pipelines/alphafold_inference_pipeline_sequential.py	85
src/pipelines/alphafold_optimized_monomer.py	173
src/setup.py	7
src/utils/__init__.py	1
src/utils/compile_utils.py	77
src/utils/fasta_utils.py	24
src/utils/run_utils.py	75