path	# lines of code	# active days	days since first update	days since last update	# commits	# contributors	first updated	last updated	first contributor	last contributor
env-setup/main.tf	26	7	664	47	7	5	2023-07-11	2025-03-19	ctimoteo@google.com	chmstimoteo@gmail.com
env-setup/terraform-sample.tfvars	26	5	664	454	5	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/versions.tf	53	1	68	68	1	1	2025-02-26	2025-02-26	chmstimoteo@gmail.com	chmstimoteo@gmail.com
env-setup/filestore.tf	21	3	664	640	4	2	2023-07-11	2023-08-04	ctimoteo@google.com	277946+leiterenato@users.noreply.github.com
env-setup/service_accounts.tf	38	5	664	454	5	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/vertex-training-template.yaml	17	2	651	649	2	1	2023-07-24	2023-07-26	ctimoteo@google.com	ctimoteo@google.com
env-setup/pipeline_images.tf	49	4	553	454	4	2	2023-10-30	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/network.tf	30	5	664	454	6	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/vertex-notebook.tf	23	5	664	454	6	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/variables.tf	121	5	664	454	5	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/outputs.tf	18	2	664	640	2	2	2023-07-11	2023-08-04	ctimoteo@google.com	277946+leiterenato@users.noreply.github.com
env-setup/local_provisioner.tf	34	5	664	454	6	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup/gcs_bucket.tf	11	5	664	454	6	4	2023-07-11	2024-02-06	ctimoteo@google.com	63188512+yudyhendry@users.noreply.github.com
1-alphafold-quick-start.ipynb	404	20	951	68	26	13	2022-09-27	2025-02-26	leiterenato@gmail.com	laurent.grangeau@gmail.com
src/analysis/residue_constants.py	678	1	168	168	1	1	2024-11-18	2024-11-18	trainormg@users.noreply.github.com	trainormg@users.noreply.github.com
src/analysis/utils.py	29	1	880	880	1	1	2022-12-07	2022-12-07	leiterenato@gmail.com	leiterenato@gmail.com
src/components/hhsearch.py	54	3	479	419	4	3	2024-01-12	2024-03-12	yudyhendry@google.com	yudyhendry@google.com
src/components/aggregate_features.py	43	6	961	419	7	5	2022-09-17	2024-03-12	jarokaz@no-reply.com	yudyhendry@google.com
src/components/hhblits.py	40	3	479	419	4	3	2024-01-12	2024-03-12	yudyhendry@google.com	yudyhendry@google.com
src/components/__init__.py	9	3	961	952	3	2	2022-09-17	2022-09-26	jarokaz@no-reply.com	277946+leiterenato@users.noreply.github.com
src/components/data_pipeline.py	74	5	872	419	6	5	2022-12-15	2024-03-12	leiterenato@gmail.com	yudyhendry@google.com
src/components/alphafold_utils.py	464	6	1057	867	6	4	2022-06-13	2022-12-20	jarek.r.kaz@gmail.com	277946+leiterenato@users.noreply.github.com
src/components/relax_protein.py	43	6	1064	419	7	6	2022-06-06	2024-03-12	leiterenato@gmail.com	yudyhendry@google.com
src/components/predict_relax.py	53	9	961	419	10	7	2022-09-17	2024-03-12	jarokaz@no-reply.com	yudyhendry@google.com
src/components/configure_run.py	64	4	1064	419	5	4	2022-06-06	2024-03-12	leiterenato@gmail.com	yudyhendry@google.com
src/components/hmmsearch.py	50	3	479	419	4	3	2024-01-12	2024-03-12	yudyhendry@google.com	yudyhendry@google.com
src/components/jackhmmer.py	38	3	479	419	4	3	2024-01-12	2024-03-12	yudyhendry@google.com	yudyhendry@google.com
src/components/model_predict.py	48	6	611	419	8	5	2023-09-02	2024-03-12	cpooley@google.com	yudyhendry@google.com
src/pipelines/alphafold_inference_pipeline.py	108	12	1057	419	16	8	2022-06-13	2024-03-12	277946+leiterenato@users.noreply.github.com	yudyhendry@google.com
src/pipelines/alphafold_inference_pipeline_sequential.py	85	11	961	419	12	8	2022-09-17	2024-03-12	jarokaz@no-reply.com	yudyhendry@google.com
src/pipelines/alphafold_optimized_monomer.py	173	8	1057	419	10	7	2022-06-13	2024-03-12	277946+leiterenato@users.noreply.github.com	yudyhendry@google.com
src/utils/compile_utils.py	77	2	951	950	2	2	2022-09-27	2022-09-28	leiterenato@gmail.com	jarek.r.kaz@gmail.com
src/utils/fasta_utils.py	24	4	951	454	4	4	2022-09-27	2024-02-06	leiterenato@gmail.com	63188512+yudyhendry@users.noreply.github.com
src/utils/__init__.py	1	1	419	419	2	2	2024-03-12	2024-03-12	chmstimoteo@gmail.com	yudyhendry@google.com
src/utils/run_utils.py	75	2	951	950	2	2	2022-09-27	2022-09-28	leiterenato@gmail.com	jarek.r.kaz@gmail.com
src/setup.py	7	1	419	419	2	2	2024-03-12	2024-03-12	chmstimoteo@gmail.com	yudyhendry@google.com
src/config.py	32	15	961	454	16	10	2022-09-17	2024-02-06	jarokaz@no-reply.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/index.html	13	2	479	454	2	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/index.css	57	3	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/components/SimpleDialog.tsx	72	3	461	454	3	2	2024-01-30	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/components/ResponsiveAppBar.tsx	74	3	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/components/GoogleSignInButton.tsx	81	2	479	454	2	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/App.tsx	107	2	479	454	2	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/common/StringSet.ts	44	2	479	454	2	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/frontend/src/common/CommonFunctions.ts	117	3	479	318	3	3	2024-01-12	2024-06-21	yudyhendry@google.com	chmstimoteo@gmail.com
src/frontend/src/main.tsx	4	2	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	yudyhendry@google.com
src/frontend/src/NewJob.tsx	489	5	479	318	5	3	2024-01-12	2024-06-21	yudyhendry@google.com	chmstimoteo@gmail.com
src/frontend/src/JobResults.tsx	227	3	479	454	4	2	2024-01-12	2024-02-06	yudyhendry@google.com	yudyhendry@google.com
src/frontend/vite.config.ts	5	2	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	yudyhendry@google.com
src/backend/settings.py	3	2	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	yudyhendry@google.com
src/backend/templates/index.html	16	3	479	454	3	2	2024-01-12	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
src/backend/main.py	320	6	479	318	9	3	2024-01-12	2024-06-21	yudyhendry@google.com	chmstimoteo@gmail.com
1.1-alphafold-quick-start-multimer.ipynb	401	6	649	168	7	7	2023-07-26	2024-11-18	ctimoteo@google.com	trainormg@users.noreply.github.com
env-setup-portal/main.tf	170	11	560	404	11	3	2023-10-23	2024-03-27	yudyhendry@google.com	chmstimoteo@gmail.com
env-setup-portal/terraform-sample.tfvars	29	2	459	454	2	2	2024-02-01	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup-portal/versions.tf	53	1	68	68	1	1	2025-02-26	2025-02-26	chmstimoteo@gmail.com	chmstimoteo@gmail.com
env-setup-portal/variables.tf	55	5	560	454	5	2	2023-10-23	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
env-setup-portal/output.tf	3	2	560	454	2	2	2023-10-23	2024-02-06	yudyhendry@google.com	63188512+yudyhendry@users.noreply.github.com
2-alphafold-metadata-exploration.ipynb	570	6	951	419	13	6	2022-09-27	2024-03-12	leiterenato@gmail.com	yudyhendry@google.com