in src/aws-genomics-cdk/lib/workflows/job-definition-construct.ts [11:58]
constructor(scope: cdk.Construct, id: string, props: GenomicsJobDefinitionProps) {
super(scope, id);
const repositoryUri = `${props.env.account}.dkr.ecr.${props.env.region}.amazonaws.com/${props.repository}`;
const containerImage = ecs.ContainerImage.fromRegistry(repositoryUri);
const mountPoints = [
{
containerPath: "/opt/aws-cli",
readOnly: false,
sourceVolume: "awscli"
},
{
containerPath: "/data",
readOnly: false,
sourceVolume: "data"
}
];
const volumes = [
{
name: "awscli",
host: { sourcePath: "/opt/aws-cli" }
},
{
name: "data",
host: { sourcePath: "/data" }
}
];
const jobDefinitionContainerProps = {
image: containerImage,
jobRole: props.jobRole,
memoryLimitMiB: props.memoryLimit,
mountPoints: mountPoints,
volumes: volumes,
vcpus: props.vcpus ?? 1
};
const jobDefinitionProps = {
container: jobDefinitionContainerProps,
jobDefinitionName: id,
retryAttempts: props.retryAttempts ?? 1,
timeout: cdk.Duration.seconds(props.timeout ?? 3600)
};
this.jobDefinition = new batch.JobDefinition(this, id, jobDefinitionProps);
}