def transform()

in src/dicomwrapper.py [0:0]

• 25 lines of code
• 6 McCabe index (conditional complexity)

    def transform(self, name, img):
        # Full list of keywords https://github.com/pydicom/pydicom/blob/master/pydicom/_dicom_dict.py
        log.debug(f'Flattening {name} to dataset')
        element = {}
        for elem in img:
            try:
                if elem.keyword and not elem.is_empty:
                    elem_val = self.eval_vr_value(elem)
                    element[elem.keyword] = elem_val
                    log.debug(f'Adding tag {elem.keyword}: "{elem_val}" VR: {elem.VR}')
                else:
                    log.info(f'Ignore Tag: {elem.tag} VR: {elem.VR}')
            except Exception as e:
                log.error(f'Unable to process {name}, invalid tag keyword')
                log.error(f'Dump Invalid Elem tag: "{elem.tag}" VR: "{elem.VR}" name: "{elem.name}" keyword: "{elem.keyword}" value: {elem.repval}')
                log.error(e)
                raise
        element['SOURCE_S3_BUCKET'] = self.source_s3_bucket
        element['SOURCE_S3_REGION'] = self.source_s3_bucket_region
        element['SOURCE_S3_KEY'] = self.source_s3_key
        element['SOURCE_S3_ARCHIVE_PATH'] = name
        # Convert snake_case to CamelCase before checking
        cc_PARITION_COL = self.convert_cc(PARTITION_COL)

        if cc_PARITION_COL not in element:
            log.info(f'Missing {PARTITION_COL} adding value')
            element[cc_PARITION_COL] = datetime.datetime.fromisoformat('1979-01-01').date()

        return element