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unit: def main()
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id: 2
unit: def parse_args()
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id: 3
unit: def __iter__()
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id: 4
unit: def init_residue()
file: xpdb.py
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id: 5
unit: def step()
file: src/helpers.py
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number of parameters: 3

id: 6
unit: def load_sagemaker_config()
file: src/helpers.py
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id: 7
unit: def __init__()
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id: 8
unit: def __iter__()
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id: 9
unit: def _get_atom_line()
file: xpdb.py
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id: 10
unit: def roc_auc_score()
file: src/helpers.py
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id: 11
unit: def convert_to_graph()
file: src/dataset.py
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id: 12
unit: def get_secret()
file: utils.py
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id: 13
unit: def load_sagemaker_model_artifact()
file: utils.py
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id: 14
unit: def attention_scores()
file: src/model.py
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id: 15
unit: def setup()
file: src/helpers.py
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id: 16
unit: def is_aa_by_target_atoms()
file: pdb_parse.py
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size: 8 LOC
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number of parameters: 1

id: 17
unit: def __init__()
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id: 18
unit: def _conv_forward()
file: src/model.py
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id: 19
unit: def __init__()
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id: 20
unit: def gunzip_to_ram()
file: pdb_parse.py
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id: 21
unit: def run_a_train_epoch()
file: src/main.py
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size: 6 LOC
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id: 22
unit: def forward()
file: src/model.py
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id: 23
unit: def collate_protein_graphs()
file: src/dataset.py
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id: 24
unit: def three_to_one_standard()
file: pdb_parse.py
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id: 25
unit: def chain_to_coords()
file: pdb_parse.py
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id: 26
unit: def parse_pdb_file_to_json_record()
file: pdb_parse.py
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id: 27
unit: def __init__()
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id: 28
unit: def __init__()
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id: 29
unit: def update()
file: src/helpers.py
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id: 30
unit: def save_checkpoint()
file: src/helpers.py
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number of parameters: 2

id: 31
unit: def load_checkpoint()
file: src/helpers.py
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id: 32
unit: def run_an_eval_epoch()
file: src/main.py
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id: 33
unit: def __len__()
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id: 34
unit: def __init__()
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number of parameters: 0

id: 35
unit: def match_by_split()
file: src/dataset.py
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size: 2 LOC
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number of parameters: 1

id: 36
unit: def _parse_structure()
file: pdb_parse.py
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number of parameters: 0

id: 37
unit: def parse_structure()
file: pdb_parse.py
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size: 2 LOC
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number of parameters: 0

id: 38
unit: def get_atom_coords()
file: pdb_parse.py
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size: 2 LOC
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number of parameters: 0