anthropics / knowledge-work-plugins File Age & Freshness

File age measurements show the distribution of file ages (days since the first commit) and the file freshness (days since the latest commit).

Summary

Number of files: 31
Daily file updates (only one update per file and date counted): 1150
First update: 2026-01-30
Latest update: 2026-06-23
Days between first and latest update: 145 (20 weeks, estimated 100 working days)
Active days (at least one file change): 44
Files without commit history (ignored): 29 (8,885 lines of code)

Files without history

Data:

Organized per file

File Change History Overall

File Age Distribution Overall

Days since first update

There are 2 files with 549 lines of code in files.

0 files that are 366+ days old (0 lines of code)
0 files that are 181-365 days old (0 lines of code)
2 files that are 91-180 days old (549 lines of code)
0 files that are 31-90 days old (0 lines of code)
0 files that are 1-30 days old (0 lines of code)

Legend:

366+

181-365

91-180

31-90

1-30

explore: grouped by folders | grouped by age

File Freshness Distribution Overall

Days since last update

There are 2 files with 549 lines of code in files.

0 files have been last changed 366+ days ago (0 lines of code)
0 files have been last changed 181-365 days ago (0 lines of code)
2 files have been last changed 91-180 days ago (549 lines of code)
0 files have been last changed 31-90 days ago (0 lines of code)
0 files have been last changed 1-30 days ago (0 lines of code)

Legend:

366+

181-365

91-180

31-90

1-30

explore: grouped by folders | grouped by freshness

File Change History per File Extension

md, json, py, txt, yaml, html

File Age Distribution per Extension

Days since first update

366+

181-365

91-180

31-90

1-30

File Freshness Distribution per Extension

Days since last update

366+

181-365

91-180

31-90

1-30

File Change History per Logical Decomposition

primary

primary (file age distribution)

Days since first update

366+

181-365

91-180

31-90

1-30

primary (file freshness distribution)

Days since last update

366+

181-365

91-180

31-90

1-30

Oldest Files (Top 31)

File	# lines	# units	created	last modified	# changes (days)	# contributors	first contributor	latest contributor
check_environment.py in bio-research/skills/nextflow-development/scripts	348	9	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
detect_data_type.py in bio-research/skills/nextflow-development/scripts	201	6	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
dashboard.html in productivity/skills	2679	-
validate_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	815	24
sra_geo_fetch.py in bio-research/skills/nextflow-development/scripts	511	11
ncbi_utils.py in bio-research/skills/nextflow-development/scripts/utils	509	16
convert_to_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	386	11
manage_genomes.py in bio-research/skills/nextflow-development/scripts	368	9
model_utils.py in bio-research/skills/scvi-tools/scripts	319	10
generate_samplesheet.py in bio-research/skills/nextflow-development/scripts	288	10
validate_adata.py in bio-research/skills/scvi-tools/scripts	253	7
export_parser.py in bio-research/skills/instrument-data-to-allotrope/scripts	234	6
train_model.py in bio-research/skills/scvi-tools/scripts	233	7
sarek.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	209	-
validators.py in bio-research/skills/nextflow-development/scripts/utils	171	8
atacseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	167	-
sample_inference.py in bio-research/skills/nextflow-development/scripts/utils	161	7
qc_analysis.py in bio-research/skills/single-cell-rna-qc/scripts	155	-
qc_plotting.py in bio-research/skills/single-cell-rna-qc/scripts	153	3
flatten_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	153	7
integrate_datasets.py in bio-research/skills/scvi-tools/scripts	135	3
rnaseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	130	-
differential_expression.py in bio-research/skills/scvi-tools/scripts	129	3
transfer_labels.py in bio-research/skills/scvi-tools/scripts	125	3
cluster_embed.py in bio-research/skills/scvi-tools/scripts	111	3
genomes.yaml in bio-research/skills/nextflow-development/scripts/config	108	-
file_discovery.py in bio-research/skills/nextflow-development/scripts/utils	101	5
prepare_data.py in bio-research/skills/scvi-tools/scripts	87	2
qc_core.py in bio-research/skills/single-cell-rna-qc/scripts	80	6
package_data_skill.py in data/skills/data-context-extractor/scripts	68	3
__init__.py in bio-research/skills/nextflow-development/scripts/utils	47	-

Files Not Recently Changed (Top 31)

File	# lines	# units	created	last modified	# changes (days)	# contributors	first contributor	latest contributor
detect_data_type.py in bio-research/skills/nextflow-development/scripts	201	6	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
check_environment.py in bio-research/skills/nextflow-development/scripts	348	9	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
__init__.py in bio-research/skills/nextflow-development/scripts/utils	47	-
package_data_skill.py in data/skills/data-context-extractor/scripts	68	3
qc_core.py in bio-research/skills/single-cell-rna-qc/scripts	80	6
prepare_data.py in bio-research/skills/scvi-tools/scripts	87	2
file_discovery.py in bio-research/skills/nextflow-development/scripts/utils	101	5
genomes.yaml in bio-research/skills/nextflow-development/scripts/config	108	-
cluster_embed.py in bio-research/skills/scvi-tools/scripts	111	3
transfer_labels.py in bio-research/skills/scvi-tools/scripts	125	3
differential_expression.py in bio-research/skills/scvi-tools/scripts	129	3
rnaseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	130	-
integrate_datasets.py in bio-research/skills/scvi-tools/scripts	135	3
flatten_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	153	7
qc_plotting.py in bio-research/skills/single-cell-rna-qc/scripts	153	3
qc_analysis.py in bio-research/skills/single-cell-rna-qc/scripts	155	-
sample_inference.py in bio-research/skills/nextflow-development/scripts/utils	161	7
atacseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	167	-
validators.py in bio-research/skills/nextflow-development/scripts/utils	171	8
sarek.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	209	-
train_model.py in bio-research/skills/scvi-tools/scripts	233	7
export_parser.py in bio-research/skills/instrument-data-to-allotrope/scripts	234	6
validate_adata.py in bio-research/skills/scvi-tools/scripts	253	7
generate_samplesheet.py in bio-research/skills/nextflow-development/scripts	288	10
model_utils.py in bio-research/skills/scvi-tools/scripts	319	10
manage_genomes.py in bio-research/skills/nextflow-development/scripts	368	9
convert_to_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	386	11
ncbi_utils.py in bio-research/skills/nextflow-development/scripts/utils	509	16
sra_geo_fetch.py in bio-research/skills/nextflow-development/scripts	511	11
validate_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	815	24
dashboard.html in productivity/skills	2679	-

Most Recently Created Files (Top 31)

File	# lines	# units	created	last modified	# changes (days)	# contributors	first contributor	latest contributor
dashboard.html in productivity/skills	2679	-
validate_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	815	24
sra_geo_fetch.py in bio-research/skills/nextflow-development/scripts	511	11
ncbi_utils.py in bio-research/skills/nextflow-development/scripts/utils	509	16
convert_to_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	386	11
manage_genomes.py in bio-research/skills/nextflow-development/scripts	368	9
model_utils.py in bio-research/skills/scvi-tools/scripts	319	10
generate_samplesheet.py in bio-research/skills/nextflow-development/scripts	288	10
validate_adata.py in bio-research/skills/scvi-tools/scripts	253	7
export_parser.py in bio-research/skills/instrument-data-to-allotrope/scripts	234	6
train_model.py in bio-research/skills/scvi-tools/scripts	233	7
sarek.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	209	-
validators.py in bio-research/skills/nextflow-development/scripts/utils	171	8
atacseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	167	-
sample_inference.py in bio-research/skills/nextflow-development/scripts/utils	161	7
qc_analysis.py in bio-research/skills/single-cell-rna-qc/scripts	155	-
qc_plotting.py in bio-research/skills/single-cell-rna-qc/scripts	153	3
flatten_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	153	7
integrate_datasets.py in bio-research/skills/scvi-tools/scripts	135	3
rnaseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	130	-
differential_expression.py in bio-research/skills/scvi-tools/scripts	129	3
transfer_labels.py in bio-research/skills/scvi-tools/scripts	125	3
cluster_embed.py in bio-research/skills/scvi-tools/scripts	111	3
genomes.yaml in bio-research/skills/nextflow-development/scripts/config	108	-
file_discovery.py in bio-research/skills/nextflow-development/scripts/utils	101	5
prepare_data.py in bio-research/skills/scvi-tools/scripts	87	2
qc_core.py in bio-research/skills/single-cell-rna-qc/scripts	80	6
package_data_skill.py in data/skills/data-context-extractor/scripts	68	3
__init__.py in bio-research/skills/nextflow-development/scripts/utils	47	-
check_environment.py in bio-research/skills/nextflow-development/scripts	348	9	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
detect_data_type.py in bio-research/skills/nextflow-development/scripts	201	6	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com

Most Recently Changed Files (Top 31)

File	# lines	# units	created	last modified	# changes (days)	# contributors	first contributor	latest contributor
dashboard.html in productivity/skills	2679	-
validate_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	815	24
sra_geo_fetch.py in bio-research/skills/nextflow-development/scripts	511	11
ncbi_utils.py in bio-research/skills/nextflow-development/scripts/utils	509	16
convert_to_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	386	11
manage_genomes.py in bio-research/skills/nextflow-development/scripts	368	9
model_utils.py in bio-research/skills/scvi-tools/scripts	319	10
generate_samplesheet.py in bio-research/skills/nextflow-development/scripts	288	10
validate_adata.py in bio-research/skills/scvi-tools/scripts	253	7
export_parser.py in bio-research/skills/instrument-data-to-allotrope/scripts	234	6
train_model.py in bio-research/skills/scvi-tools/scripts	233	7
sarek.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	209	-
validators.py in bio-research/skills/nextflow-development/scripts/utils	171	8
atacseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	167	-
sample_inference.py in bio-research/skills/nextflow-development/scripts/utils	161	7
qc_analysis.py in bio-research/skills/single-cell-rna-qc/scripts	155	-
qc_plotting.py in bio-research/skills/single-cell-rna-qc/scripts	153	3
flatten_asm.py in bio-research/skills/instrument-data-to-allotrope/scripts	153	7
integrate_datasets.py in bio-research/skills/scvi-tools/scripts	135	3
rnaseq.yaml in bio-research/skills/nextflow-development/scripts/config/pipelines	130	-
differential_expression.py in bio-research/skills/scvi-tools/scripts	129	3
transfer_labels.py in bio-research/skills/scvi-tools/scripts	125	3
cluster_embed.py in bio-research/skills/scvi-tools/scripts	111	3
genomes.yaml in bio-research/skills/nextflow-development/scripts/config	108	-
file_discovery.py in bio-research/skills/nextflow-development/scripts/utils	101	5
prepare_data.py in bio-research/skills/scvi-tools/scripts	87	2
qc_core.py in bio-research/skills/single-cell-rna-qc/scripts	80	6
package_data_skill.py in data/skills/data-context-extractor/scripts	68	3
__init__.py in bio-research/skills/nextflow-development/scripts/utils	47	-
check_environment.py in bio-research/skills/nextflow-development/scripts	348	9	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com
detect_data_type.py in bio-research/skills/nextflow-development/scripts	201	6	2026-03-18	2026-03-26	2	2	167664334+haosenwang1018@us...	bthompson@anthropic.com