Path	Lines of Code
ctakes-clinical-pipeline/desc/analysis_engine/AggregateCdaProcessor.xml	228
ctakes-clinical-pipeline/desc/analysis_engine/AggregateCdaUMLSProcessor.xml	231
ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextFastUMLSProcessor.xml	206
ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml	255
ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextUMLSProcessor.xml	204
ctakes-clinical-pipeline/desc/analysis_engine/CuisOnlyPlaintextUMLSProcessor.xml	124
ctakes-clinical-pipeline/desc/analysis_engine/ExtractionPrepAnnotator.xml	52
ctakes-clinical-pipeline/desc/analysis_engine/LookupWindowAnnotator.xml	44
ctakes-clinical-pipeline/desc/analysis_engine/MaxLookupWindows.xml	125
ctakes-clinical-pipeline/desc/analysis_engine/NP2LookupWindow.xml	90
ctakes-clinical-pipeline/desc/analysis_engine/NegationAnnotator.xml	140
ctakes-clinical-pipeline/desc/analysis_engine/SimpleSegmentAnnotator.xml	44
ctakes-clinical-pipeline/desc/analysis_engine/assertion_training_steps/AggregatePlaintextUMLSProcessor__no_dictionary_no_assertion.xml	167
ctakes-clinical-pipeline/desc/collection_processing_engine/assertion_training_steps/process_gold_assertion_data.xml	58
ctakes-clinical-pipeline/desc/collection_processing_engine/test1.xml	58
ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ClinicalPipelineFactory.java	188
ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ClinicalPipelineWithUmls.java	29
ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ae/ExtractionPrepAnnotator.java	101
ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/runtime/BagOfAnnotationsGenerator.java	60
ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/runtime/BagOfCUIsGenerator.java	37