pyiceberg/io/fsspec.py (234 lines of code) (raw):
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
"""FileIO implementation for reading and writing table files that uses fsspec compatible filesystems."""
import errno
import json
import logging
import os
from copy import copy
from functools import lru_cache, partial
from typing import (
TYPE_CHECKING,
Any,
Callable,
Dict,
Union,
)
from urllib.parse import urlparse
import requests
from fsspec import AbstractFileSystem
from fsspec.implementations.local import LocalFileSystem
from requests import HTTPError
from pyiceberg.catalog import TOKEN
from pyiceberg.exceptions import SignError
from pyiceberg.io import (
ADLS_ACCOUNT_KEY,
ADLS_ACCOUNT_NAME,
ADLS_CLIENT_ID,
ADLS_CONNECTION_STRING,
ADLS_SAS_TOKEN,
ADLS_TENANT_ID,
AWS_ACCESS_KEY_ID,
AWS_REGION,
AWS_SECRET_ACCESS_KEY,
AWS_SESSION_TOKEN,
GCS_ACCESS,
GCS_CACHE_TIMEOUT,
GCS_CONSISTENCY,
GCS_DEFAULT_LOCATION,
GCS_PROJECT_ID,
GCS_REQUESTER_PAYS,
GCS_SERVICE_HOST,
GCS_SESSION_KWARGS,
GCS_TOKEN,
GCS_VERSION_AWARE,
S3_ACCESS_KEY_ID,
S3_CONNECT_TIMEOUT,
S3_ENDPOINT,
S3_PROXY_URI,
S3_REGION,
S3_REQUEST_TIMEOUT,
S3_SECRET_ACCESS_KEY,
S3_SESSION_TOKEN,
S3_SIGNER,
S3_SIGNER_ENDPOINT,
S3_SIGNER_ENDPOINT_DEFAULT,
S3_SIGNER_URI,
ADLS_ClIENT_SECRET,
FileIO,
InputFile,
InputStream,
OutputFile,
OutputStream,
)
from pyiceberg.typedef import Properties
from pyiceberg.utils.properties import get_first_property_value, get_header_properties, property_as_bool
logger = logging.getLogger(__name__)
if TYPE_CHECKING:
from botocore.awsrequest import AWSRequest
def s3v4_rest_signer(properties: Properties, request: "AWSRequest", **_: Any) -> "AWSRequest":
signer_url = properties.get(S3_SIGNER_URI, properties["uri"]).rstrip("/")
signer_endpoint = properties.get(S3_SIGNER_ENDPOINT, S3_SIGNER_ENDPOINT_DEFAULT)
signer_headers = {}
if token := properties.get(TOKEN):
signer_headers = {"Authorization": f"Bearer {token}"}
signer_headers.update(get_header_properties(properties))
signer_body = {
"method": request.method,
"region": request.context["client_region"],
"uri": request.url,
"headers": {key: [val] for key, val in request.headers.items()},
}
response = requests.post(f"{signer_url}/{signer_endpoint.strip()}", headers=signer_headers, json=signer_body)
try:
response.raise_for_status()
response_json = response.json()
except HTTPError as e:
raise SignError(f"Failed to sign request {response.status_code}: {signer_body}") from e
for key, value in response_json["headers"].items():
request.headers.add_header(key, ", ".join(value))
request.url = response_json["uri"]
return request
SIGNERS: Dict[str, Callable[[Properties, "AWSRequest"], "AWSRequest"]] = {"S3V4RestSigner": s3v4_rest_signer}
def _file(_: Properties) -> LocalFileSystem:
return LocalFileSystem(auto_mkdir=True)
def _s3(properties: Properties) -> AbstractFileSystem:
from s3fs import S3FileSystem
client_kwargs = {
"endpoint_url": properties.get(S3_ENDPOINT),
"aws_access_key_id": get_first_property_value(properties, S3_ACCESS_KEY_ID, AWS_ACCESS_KEY_ID),
"aws_secret_access_key": get_first_property_value(properties, S3_SECRET_ACCESS_KEY, AWS_SECRET_ACCESS_KEY),
"aws_session_token": get_first_property_value(properties, S3_SESSION_TOKEN, AWS_SESSION_TOKEN),
"region_name": get_first_property_value(properties, S3_REGION, AWS_REGION),
}
config_kwargs = {}
register_events: Dict[str, Callable[[Properties], None]] = {}
if signer := properties.get(S3_SIGNER):
logger.info("Loading signer %s", signer)
if signer_func := SIGNERS.get(signer):
signer_func_with_properties = partial(signer_func, properties)
register_events["before-sign.s3"] = signer_func_with_properties
# Disable the AWS Signer
from botocore import UNSIGNED
config_kwargs["signature_version"] = UNSIGNED
else:
raise ValueError(f"Signer not available: {signer}")
if proxy_uri := properties.get(S3_PROXY_URI):
config_kwargs["proxies"] = {"http": proxy_uri, "https": proxy_uri}
if connect_timeout := properties.get(S3_CONNECT_TIMEOUT):
config_kwargs["connect_timeout"] = float(connect_timeout)
if request_timeout := properties.get(S3_REQUEST_TIMEOUT):
config_kwargs["read_timeout"] = float(request_timeout)
fs = S3FileSystem(client_kwargs=client_kwargs, config_kwargs=config_kwargs)
for event_name, event_function in register_events.items():
fs.s3.meta.events.register_last(event_name, event_function, unique_id=1925)
return fs
def _gs(properties: Properties) -> AbstractFileSystem:
# https://gcsfs.readthedocs.io/en/latest/api.html#gcsfs.core.GCSFileSystem
from gcsfs import GCSFileSystem
return GCSFileSystem(
project=properties.get(GCS_PROJECT_ID),
access=properties.get(GCS_ACCESS, "full_control"),
token=properties.get(GCS_TOKEN),
consistency=properties.get(GCS_CONSISTENCY, "none"),
cache_timeout=properties.get(GCS_CACHE_TIMEOUT),
requester_pays=property_as_bool(properties, GCS_REQUESTER_PAYS, False),
session_kwargs=json.loads(properties.get(GCS_SESSION_KWARGS, "{}")),
endpoint_url=properties.get(GCS_SERVICE_HOST),
default_location=properties.get(GCS_DEFAULT_LOCATION),
version_aware=property_as_bool(properties, GCS_VERSION_AWARE, False),
)
def _adls(properties: Properties) -> AbstractFileSystem:
from adlfs import AzureBlobFileSystem
for key, sas_token in {
key.replace(f"{ADLS_SAS_TOKEN}.", ""): value for key, value in properties.items() if key.startswith(ADLS_SAS_TOKEN)
}.items():
if ADLS_ACCOUNT_NAME not in properties:
properties[ADLS_ACCOUNT_NAME] = key.split(".")[0]
if ADLS_SAS_TOKEN not in properties:
properties[ADLS_SAS_TOKEN] = sas_token
return AzureBlobFileSystem(
connection_string=properties.get(ADLS_CONNECTION_STRING),
account_name=properties.get(ADLS_ACCOUNT_NAME),
account_key=properties.get(ADLS_ACCOUNT_KEY),
sas_token=properties.get(ADLS_SAS_TOKEN),
tenant_id=properties.get(ADLS_TENANT_ID),
client_id=properties.get(ADLS_CLIENT_ID),
client_secret=properties.get(ADLS_ClIENT_SECRET),
)
SCHEME_TO_FS = {
"": _file,
"file": _file,
"s3": _s3,
"s3a": _s3,
"s3n": _s3,
"abfs": _adls,
"abfss": _adls,
"gs": _gs,
"gcs": _gs,
}
class FsspecInputFile(InputFile):
"""An input file implementation for the FsspecFileIO.
Args:
location (str): A URI to a file location.
fs (AbstractFileSystem): An fsspec filesystem instance.
"""
def __init__(self, location: str, fs: AbstractFileSystem):
self._fs = fs
super().__init__(location=location)
def __len__(self) -> int:
"""Return the total length of the file, in bytes."""
object_info = self._fs.info(self.location)
if size := object_info.get("Size"):
return size
elif size := object_info.get("size"):
return size
raise RuntimeError(f"Cannot retrieve object info: {self.location}")
def exists(self) -> bool:
"""Check whether the location exists."""
return self._fs.lexists(self.location)
def open(self, seekable: bool = True) -> InputStream:
"""Create an input stream for reading the contents of the file.
Args:
seekable: If the stream should support seek, or if it is consumed sequential.
Returns:
OpenFile: An fsspec compliant file-like object.
Raises:
FileNotFoundError: If the file does not exist.
"""
try:
return self._fs.open(self.location, "rb")
except FileNotFoundError as e:
# To have a consistent error handling experience, make sure exception contains missing file location.
raise e if e.filename else FileNotFoundError(errno.ENOENT, os.strerror(errno.ENOENT), self.location) from e
class FsspecOutputFile(OutputFile):
"""An output file implementation for the FsspecFileIO.
Args:
location (str): A URI to a file location.
fs (AbstractFileSystem): An fsspec filesystem instance.
"""
def __init__(self, location: str, fs: AbstractFileSystem):
self._fs = fs
super().__init__(location=location)
def __len__(self) -> int:
"""Return the total length of the file, in bytes."""
object_info = self._fs.info(self.location)
if size := object_info.get("Size"):
return size
elif size := object_info.get("size"):
return size
raise RuntimeError(f"Cannot retrieve object info: {self.location}")
def exists(self) -> bool:
"""Check whether the location exists."""
return self._fs.lexists(self.location)
def create(self, overwrite: bool = False) -> OutputStream:
"""Create an output stream for reading the contents of the file.
Args:
overwrite (bool): Whether to overwrite the file if it already exists.
Returns:
OpenFile: An fsspec compliant file-like object.
Raises:
FileExistsError: If the file already exists at the location and overwrite is set to False.
Note:
If overwrite is set to False, a check is first performed to verify that the file does not exist.
This is not thread-safe and a possibility does exist that the file can be created by a concurrent
process after the existence check yet before the output stream is created. In such a case, the default
behavior will truncate the contents of the existing file when opening the output stream.
"""
if not overwrite and self.exists():
raise FileExistsError(f"Cannot create file, file already exists: {self.location}")
return self._fs.open(self.location, "wb")
def to_input_file(self) -> FsspecInputFile:
"""Return a new FsspecInputFile for the location at `self.location`."""
return FsspecInputFile(location=self.location, fs=self._fs)
class FsspecFileIO(FileIO):
"""A FileIO implementation that uses fsspec."""
def __init__(self, properties: Properties):
self._scheme_to_fs = {}
self._scheme_to_fs.update(SCHEME_TO_FS)
self.get_fs: Callable[[str], AbstractFileSystem] = lru_cache(self._get_fs)
super().__init__(properties=properties)
def new_input(self, location: str) -> FsspecInputFile:
"""Get an FsspecInputFile instance to read bytes from the file at the given location.
Args:
location (str): A URI or a path to a local file.
Returns:
FsspecInputFile: An FsspecInputFile instance for the given location.
"""
uri = urlparse(location)
fs = self.get_fs(uri.scheme)
return FsspecInputFile(location=location, fs=fs)
def new_output(self, location: str) -> FsspecOutputFile:
"""Get an FsspecOutputFile instance to write bytes to the file at the given location.
Args:
location (str): A URI or a path to a local file.
Returns:
FsspecOutputFile: An FsspecOutputFile instance for the given location.
"""
uri = urlparse(location)
fs = self.get_fs(uri.scheme)
return FsspecOutputFile(location=location, fs=fs)
def delete(self, location: Union[str, InputFile, OutputFile]) -> None:
"""Delete the file at the given location.
Args:
location (Union[str, InputFile, OutputFile]): The URI to the file--if an InputFile instance or an
OutputFile instance is provided, the location attribute for that instance is used as the location
to delete.
"""
if isinstance(location, (InputFile, OutputFile)):
str_location = location.location # Use InputFile or OutputFile location
else:
str_location = location
uri = urlparse(str_location)
fs = self.get_fs(uri.scheme)
fs.rm(str_location)
def _get_fs(self, scheme: str) -> AbstractFileSystem:
"""Get a filesystem for a specific scheme."""
if scheme not in self._scheme_to_fs:
raise ValueError(f"No registered filesystem for scheme: {scheme}")
return self._scheme_to_fs[scheme](self.properties)
def __getstate__(self) -> Dict[str, Any]:
"""Create a dictionary of the FsSpecFileIO fields used when pickling."""
fileio_copy = copy(self.__dict__)
fileio_copy["get_fs"] = None
return fileio_copy
def __setstate__(self, state: Dict[str, Any]) -> None:
"""Deserialize the state into a FsSpecFileIO instance."""
self.__dict__ = state
self.get_fs = lru_cache(self._get_fs)