Path	Lines of Code
PearPackagingMavenPlugin/src/main/java/org/apache/uima/pear/tools/PearPackagingMojo.java	187
api-change-report.html	36
jVinci/src/main/java/org/apache/vinci/debug/AssertionFailedException.java	7
jVinci/src/main/java/org/apache/vinci/debug/Debug.java	107
jVinci/src/main/java/org/apache/vinci/debug/FatalException.java	17
jVinci/src/main/java/org/apache/vinci/transport/Attributes.java	20
jVinci/src/main/java/org/apache/vinci/transport/BaseClient.java	330
jVinci/src/main/java/org/apache/vinci/transport/BaseServer.java	263
jVinci/src/main/java/org/apache/vinci/transport/BaseServerRunnable.java	68
jVinci/src/main/java/org/apache/vinci/transport/ErrorFrame.java	6
jVinci/src/main/java/org/apache/vinci/transport/Frame.java	230
jVinci/src/main/java/org/apache/vinci/transport/FrameComponent.java	11
jVinci/src/main/java/org/apache/vinci/transport/FrameLeaf.java	283
jVinci/src/main/java/org/apache/vinci/transport/FrameTransporter.java	9
jVinci/src/main/java/org/apache/vinci/transport/KeyValuePair.java	27
jVinci/src/main/java/org/apache/vinci/transport/LeafCastException.java	9
jVinci/src/main/java/org/apache/vinci/transport/PooledVinciClient.java	157
jVinci/src/main/java/org/apache/vinci/transport/QueryableFrame.java	110
jVinci/src/main/java/org/apache/vinci/transport/ServiceDownException.java	8
jVinci/src/main/java/org/apache/vinci/transport/ServiceException.java	16
jVinci/src/main/java/org/apache/vinci/transport/SimpleTransportable.java	30
jVinci/src/main/java/org/apache/vinci/transport/TransportConstants.java	16
jVinci/src/main/java/org/apache/vinci/transport/Transportable.java	8
jVinci/src/main/java/org/apache/vinci/transport/TransportableFactory.java	4
jVinci/src/main/java/org/apache/vinci/transport/VNSException.java	8
jVinci/src/main/java/org/apache/vinci/transport/VinciClient.java	215
jVinci/src/main/java/org/apache/vinci/transport/VinciFrame.java	213
jVinci/src/main/java/org/apache/vinci/transport/VinciServable.java	5
jVinci/src/main/java/org/apache/vinci/transport/VinciServableAdapter.java	12
jVinci/src/main/java/org/apache/vinci/transport/VinciServer.java	118
jVinci/src/main/java/org/apache/vinci/transport/VinciServerRunnable.java	25
jVinci/src/main/java/org/apache/vinci/transport/XTalkTransporter.java	366
jVinci/src/main/java/org/apache/vinci/transport/context/VinciContext.java	222
jVinci/src/main/java/org/apache/vinci/transport/document/AFrame.java	180
jVinci/src/main/java/org/apache/vinci/transport/document/AFrameLeaf.java	56
jVinci/src/main/java/org/apache/vinci/transport/document/XMLToVinci.java	220
jVinci/src/main/java/org/apache/vinci/transport/document/XMLToXTalk.java	242
jVinci/src/main/java/org/apache/vinci/transport/document/XTalkToSAX.java	146
jVinci/src/main/java/org/apache/vinci/transport/util/Base64Converter.java	241
jVinci/src/main/java/org/apache/vinci/transport/util/Base64FormatException.java	10
jVinci/src/main/java/org/apache/vinci/transport/util/StreamMaterializer.java	19
jVinci/src/main/java/org/apache/vinci/transport/util/TransportableConverter.java	27
jVinci/src/main/java/org/apache/vinci/transport/util/UTFConverter.java	149
jVinci/src/main/java/org/apache/vinci/transport/util/XMLConverter.java	101
jVinci/src/main/java/org/apache/vinci/transport/vns/VNSConstants.java	11
jVinci/src/main/java/org/apache/vinci/transport/vns/client/ResolveResult.java	117
jVinci/src/main/java/org/apache/vinci/transport/vns/client/ServeonResult.java	42
jVinci/src/main/java/org/apache/vinci/transport/vns/client/VNSConfig.java	21
jVinci/src/main/java/org/apache/vinci/transport/vns/service/NameClient.java	538
jVinci/src/main/java/org/apache/vinci/transport/vns/service/Service.java	194
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceAlias.java	51
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceInfo.java	32
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceInterface.java	4
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceRegistry.java	395
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceStack.java	203
jVinci/src/main/java/org/apache/vinci/transport/vns/service/ServiceTree.java	108
jVinci/src/main/java/org/apache/vinci/transport/vns/service/VNS.java	1119
jVinci/src/main/java/org/apache/vinci/transport/vns/service/WorkspaceConfig.java	98
jcasgen-maven-plugin/src/it/classpath/src/main/java/UseTypeSystem.java	5
jcasgen-maven-plugin/src/it/classpath/src/main/resources/TypeSystem.xml	11
jcasgen-maven-plugin/src/it/classpath/src/main/resources/type/Dependency.xml	34
jcasgen-maven-plugin/src/it/classpath/src/main/resources/type/Sentence.xml	14
jcasgen-maven-plugin/src/it/classpath/src/main/resources/type/Token.xml	21
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/classpath/src/main/resources/TypeSystem.xml	11
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/classpath/src/main/resources/type/Dependency.xml	34
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/classpath/src/main/resources/type/Sentence.xml	14
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/classpath/src/main/resources/type/Token.xml	21
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/crossref1/src/main/resources/type/Token.xml	21
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/crossref2/src/main/resources/TypeSystem.xml	34
jcasgen-maven-plugin/src/it/m2e/projects/jcasgen/simple/src/main/resources/TypeSystem.xml	48
jcasgen-maven-plugin/src/it/m2e/settings-template.xml	36
jcasgen-maven-plugin/src/it/m2e/src/org/apache/uima/tools/jcasgen/maven/JCasGenM2ETest.java	136
jcasgen-maven-plugin/src/it/multimodule/crossref1/src/main/java/UseTypeSystem.java	3
jcasgen-maven-plugin/src/it/multimodule/crossref1/src/main/resources/type/Token.xml	21
jcasgen-maven-plugin/src/it/multimodule/crossref2/src/main/java/UseTypeSystem.java	4
jcasgen-maven-plugin/src/it/multimodule/crossref2/src/main/resources/TypeSystem.xml	34
jcasgen-maven-plugin/src/it/settings.xml	35
jcasgen-maven-plugin/src/it/simple/src/main/java/UseTypeSystem.java	5
jcasgen-maven-plugin/src/it/simple/src/main/resources/TypeSystem.xml	48
jcasgen-maven-plugin/src/main/java/org/apache/uima/tools/jcasgen/maven/JCasGenMojo.java	261
jcasgen-maven-plugin/src/main/resources/META-INF/m2e/lifecycle-mapping-metadata.xml	17
src/main/assembly/bin-without-jackson.xml	357
src/main/assembly/bin.xml	357
src/main/eclipse/org.eclipse.jdt.core.prefs	407
src/main/eclipse/org.eclipse.jdt.ui.prefs	121
src/main/readme_src/Eclipse/UIMA packageAllJavaSourcesIntoJar.launch	15
src/main/readme_src/packageAllJavaSourcesIntoJar.xml	64
src/main/scripts/expandFileName.cmd	20
src/main/scripts/runPearInstallerCli.cmd	25
uima-bnd-plugin/src/main/java/org/apache/uima/tools/bnd/UimaBndPlugin.java	144
uimafit-assertj/src/main/java/org/apache/uima/fit/testing/assertj/CasAssert.java	10
uimafit-assertj/src/main/java/org/apache/uima/fit/testing/assertj/CasAssert_ImplBase.java	45
uimafit-assertj/src/main/java/org/apache/uima/fit/testing/assertj/JCasAssert.java	10
uimafit-assertj/src/main/java/org/apache/uima/fit/testing/assertj/ValidationCheckAssert.java	26
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/Batch.java	26
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/Benchmark.java	219
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/BenchmarkGroup.java	47
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/CachingRandomJCasProvider.java	29
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/CasInitializationUtils.java	37
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/Measurement.java	36
uimafit-benchmark/src/main/java/org/apache/uima/fit/benchmark/RunnableWithExceptions.java	4
uimafit-benchmark/src/main/resources/org/apache/uima/fit/type/Sentence.xml	14
uimafit-benchmark/src/main/resources/org/apache/uima/fit/type/Token.xml	26
uimafit-core/pmd.xml	47
uimafit-core/src/main/assembly/bin-packed.xml	27
uimafit-core/src/main/java/org/apache/uima/fit/component/CasAnnotator_ImplBase.java	14
uimafit-core/src/main/java/org/apache/uima/fit/component/CasCollectionReader_ImplBase.java	22
uimafit-core/src/main/java/org/apache/uima/fit/component/CasConsumer_ImplBase.java	16
uimafit-core/src/main/java/org/apache/uima/fit/component/CasDumpWriter.java	242
uimafit-core/src/main/java/org/apache/uima/fit/component/CasFlowController_ImplBase.java	15
uimafit-core/src/main/java/org/apache/uima/fit/component/CasMultiplier_ImplBase.java	16
uimafit-core/src/main/java/org/apache/uima/fit/component/ExternalResourceAware.java	8
uimafit-core/src/main/java/org/apache/uima/fit/component/JCasAnnotator_ImplBase.java	14
uimafit-core/src/main/java/org/apache/uima/fit/component/JCasCollectionReader_ImplBase.java	35
uimafit-core/src/main/java/org/apache/uima/fit/component/JCasConsumer_ImplBase.java	16
uimafit-core/src/main/java/org/apache/uima/fit/component/JCasFlowController_ImplBase.java	15
uimafit-core/src/main/java/org/apache/uima/fit/component/JCasMultiplier_ImplBase.java	16
uimafit-core/src/main/java/org/apache/uima/fit/component/NoOpAnnotator.java	8
uimafit-core/src/main/java/org/apache/uima/fit/component/Resource_ImplBase.java	28
uimafit-core/src/main/java/org/apache/uima/fit/component/ViewCreatorAnnotator.java	27
uimafit-core/src/main/java/org/apache/uima/fit/component/ViewTextCopierAnnotator.java	29
uimafit-core/src/main/java/org/apache/uima/fit/component/initialize/ConfigurationParameterInitializer.java	161
uimafit-core/src/main/java/org/apache/uima/fit/component/initialize/ExternalResourceInitializer.java	124
uimafit-core/src/main/java/org/apache/uima/fit/component/initialize/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/component/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/ConfigurationParameter.java	22
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/ExternalResource.java	14
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/ExternalResourceLocator.java	5
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/FsIndex.java	25
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/FsIndexCollection.java	11
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/FsIndexKey.java	15
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/LanguageCapability.java	11
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/MimeTypeCapability.java	11
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/OperationalProperties.java	16
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/ResourceMetaData.java	14
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/SofaCapability.java	12
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/TypeCapability.java	12
uimafit-core/src/main/java/org/apache/uima/fit/descriptor/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/factory/AggregateBuilder.java	77
uimafit-core/src/main/java/org/apache/uima/fit/factory/AnalysisEngineFactory.java	641
uimafit-core/src/main/java/org/apache/uima/fit/factory/AnnotationFactory.java	16
uimafit-core/src/main/java/org/apache/uima/fit/factory/CapabilityFactory.java	91
uimafit-core/src/main/java/org/apache/uima/fit/factory/CasFactory.java	63
uimafit-core/src/main/java/org/apache/uima/fit/factory/CollectionReaderFactory.java	283
uimafit-core/src/main/java/org/apache/uima/fit/factory/ConfigurationParameterFactory.java	476
uimafit-core/src/main/java/org/apache/uima/fit/factory/ExternalResourceFactory.java	601
uimafit-core/src/main/java/org/apache/uima/fit/factory/FlowControllerFactory.java	57
uimafit-core/src/main/java/org/apache/uima/fit/factory/FsIndexFactory.java	242
uimafit-core/src/main/java/org/apache/uima/fit/factory/JCasBuilder.java	42
uimafit-core/src/main/java/org/apache/uima/fit/factory/JCasFactory.java	36
uimafit-core/src/main/java/org/apache/uima/fit/factory/ResourceCreationSpecifierFactory.java	87
uimafit-core/src/main/java/org/apache/uima/fit/factory/ResourceMetaDataFactory.java	53
uimafit-core/src/main/java/org/apache/uima/fit/factory/SofaMappingFactory.java	20
uimafit-core/src/main/java/org/apache/uima/fit/factory/TypePrioritiesFactory.java	153
uimafit-core/src/main/java/org/apache/uima/fit/factory/TypeSystemDescriptionFactory.java	155
uimafit-core/src/main/java/org/apache/uima/fit/factory/UimaContextFactory.java	15
uimafit-core/src/main/java/org/apache/uima/fit/factory/initializable/Initializable.java	6
uimafit-core/src/main/java/org/apache/uima/fit/factory/initializable/InitializableFactory.java	47
uimafit-core/src/main/java/org/apache/uima/fit/factory/locator/JndiResourceLocator.java	35
uimafit-core/src/main/java/org/apache/uima/fit/factory/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/internal/ClassLoaderUtils.java	19
uimafit-core/src/main/java/org/apache/uima/fit/internal/DescriptionUtils.java	63
uimafit-core/src/main/java/org/apache/uima/fit/internal/EnhancedClassFile.java	9
uimafit-core/src/main/java/org/apache/uima/fit/internal/ExtendedExternalResourceDescription_impl.java	32
uimafit-core/src/main/java/org/apache/uima/fit/internal/LegacySupport.java	45
uimafit-core/src/main/java/org/apache/uima/fit/internal/LegacySupportPlugin.java	14
uimafit-core/src/main/java/org/apache/uima/fit/internal/MetaDataType.java	4
uimafit-core/src/main/java/org/apache/uima/fit/internal/MetaDataUtil.java	93
uimafit-core/src/main/java/org/apache/uima/fit/internal/ReflectionUtil.java	79
uimafit-core/src/main/java/org/apache/uima/fit/internal/ResourceList.java	15
uimafit-core/src/main/java/org/apache/uima/fit/internal/ResourceManagerFactory.java	59
uimafit-core/src/main/java/org/apache/uima/fit/internal/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/internal/propertyeditors/ChatsetEditor.java	14
uimafit-core/src/main/java/org/apache/uima/fit/internal/propertyeditors/GetAsTextStringEditor.java	45
uimafit-core/src/main/java/org/apache/uima/fit/internal/propertyeditors/LocaleEditor.java	21
uimafit-core/src/main/java/org/apache/uima/fit/internal/propertyeditors/PropertyEditorUtil.java	17
uimafit-core/src/main/java/org/apache/uima/fit/internal/propertyeditors/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/pipeline/JCasIterable.java	30
uimafit-core/src/main/java/org/apache/uima/fit/pipeline/JCasIterator.java	176
uimafit-core/src/main/java/org/apache/uima/fit/pipeline/SimplePipeline.java	131
uimafit-core/src/main/java/org/apache/uima/fit/pipeline/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/testing/factory/TokenBuilder.java	108
uimafit-core/src/main/java/org/apache/uima/fit/testing/util/DisableLogging.java	17
uimafit-core/src/main/java/org/apache/uima/fit/testing/util/HideOutput.java	17
uimafit-core/src/main/java/org/apache/uima/fit/util/CasIOUtil.java	109
uimafit-core/src/main/java/org/apache/uima/fit/util/CasUtil.java	610
uimafit-core/src/main/java/org/apache/uima/fit/util/ContainmentIndex.java	83
uimafit-core/src/main/java/org/apache/uima/fit/util/FSCollectionFactory.java	646
uimafit-core/src/main/java/org/apache/uima/fit/util/FSUtil.java	460
uimafit-core/src/main/java/org/apache/uima/fit/util/JCasUtil.java	205
uimafit-core/src/main/java/org/apache/uima/fit/util/LifeCycleUtil.java	38
uimafit-core/src/main/java/org/apache/uima/fit/util/LocaleUtil.java	38
uimafit-core/src/main/java/org/apache/uima/fit/util/SimpleNamedResourceManager.java	107
uimafit-core/src/main/java/org/apache/uima/fit/util/package-info.java	1
uimafit-core/src/main/java/org/apache/uima/fit/validation/CasValidationCheck.java	7
uimafit-core/src/main/java/org/apache/uima/fit/validation/JCasValidationCheck.java	7
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationCheck.java	9
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationCheckException.java	20
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationCheckFailedException.java	20
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationCheckSkippedException.java	13
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationException.java	20
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationResult.java	76
uimafit-core/src/main/java/org/apache/uima/fit/validation/ValidationSummary.java	24
uimafit-core/src/main/java/org/apache/uima/fit/validation/Validator.java	136
uimafit-core/src/main/resources/org/apache/uima/fit/component/NoOpAnnotator.xml	30
uimafit-cpe/src/main/java/org/apache/uima/fit/cpe/CpeBuilder.java	112
uimafit-cpe/src/main/java/org/apache/uima/fit/cpe/CpePipeline.java	125
uimafit-cpe/src/main/java/org/apache/uima/fit/cpe/package-info.java	1
uimafit-junit/src/main/java/org/apache/uima/fit/testing/junit/ManagedCas.java	125
uimafit-junit/src/main/java/org/apache/uima/fit/testing/junit/ManagedJCas.java	126
uimafit-maven-plugin/src/it/default/reference/TestAnnotator.xml	53
uimafit-maven-plugin/src/it/default/src/main/java/AbstractAnnotator.java	9
uimafit-maven-plugin/src/it/default/src/main/java/TestAnnotator.java	17
uimafit-maven-plugin/src/it/settings.xml	35
uimafit-maven-plugin/src/it/with-typesystem-in-descriptors/reference/TestAnnotator.xml	78
uimafit-maven-plugin/src/it/with-typesystem-in-descriptors/src/main/java/AbstractAnnotator.java	9
uimafit-maven-plugin/src/it/with-typesystem-in-descriptors/src/main/java/TestAnnotator.java	17
uimafit-maven-plugin/src/it/with-typesystem-in-descriptors/src/main/resources/org/apache/uima/fit/type/Sentence.xml	14
uimafit-maven-plugin/src/it/with-typesystem-in-descriptors/src/main/resources/org/apache/uima/fit/type/Token.xml	26
uimafit-maven-plugin/src/main/java/org/apache/uima/fit/maven/EnhanceMojo.java	411
uimafit-maven-plugin/src/main/java/org/apache/uima/fit/maven/GenerateDescriptorsMojo.java	189
uimafit-maven-plugin/src/main/java/org/apache/uima/fit/maven/package-info.java	1
uimafit-maven-plugin/src/main/java/org/apache/uima/fit/maven/util/ComponentType.java	4
uimafit-maven-plugin/src/main/java/org/apache/uima/fit/maven/util/Util.java	128
uimafit-maven-plugin/src/main/resources/META-INF/m2e/lifecycle-mapping-metadata.xml	30
uimafit-spring/src/main/java/org/apache/uima/fit/spring/SpringContextResourceManager.java	98
uimafit-spring/src/main/java/org/apache/uima/fit/spring/factory/AnalysisEngineFactory_impl.java	23
uimafit-spring/src/main/java/org/apache/uima/fit/spring/factory/CasConsumerFactory_impl.java	23
uimafit-spring/src/main/java/org/apache/uima/fit/spring/factory/CasInitializerFactory_impl.java	24
uimafit-spring/src/main/java/org/apache/uima/fit/spring/factory/CollectionReaderFactory_impl.java	23
uimafit-spring/src/main/java/org/apache/uima/fit/spring/factory/CustomResourceFactory_impl.java	23
uimafit-spring/src/main/java/org/apache/uima/fit/spring/util/ResourceInitializationUtil.java	30
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/CASTransportable.java	304
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/VinciAnalysisEngineServiceAdapter.java	35
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/VinciAnalysisEngineServiceStub.java	226
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/VinciAnalysisEngineService_impl.java	258
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/VinciBinaryAnalysisEngineServiceStub.java	187
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/VinciBinaryAnalysisEngineService_impl.java	259
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/Constants.java	22
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/Descriptor.java	154
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/NetworkUtil.java	29
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/SaxVinciFrameBuilder.java	80
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/Shutdown.java	17
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/UimaSaxVinciFrameBuilder.java	34
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/VinciSaxParser.java	68
uimaj-adapter-vinci/src/main/java/org/apache/uima/adapter/vinci/util/VinciTAEClient.java	35
uimaj-bootstrap/src/main/java/org/apache/uima/bootstrap/UimaBootstrap.java	101
uimaj-core/src/main/java/org/apache/uima/CompositeResourceFactory.java	6
uimaj-core/src/main/java/org/apache/uima/Constants.java	14
uimaj-core/src/main/java/org/apache/uima/I18nExceptionI.java	28
uimaj-core/src/main/java/org/apache/uima/InternationalizedException.java	56
uimaj-core/src/main/java/org/apache/uima/InternationalizedRuntimeException.java	53
uimaj-core/src/main/java/org/apache/uima/List_of_ints.java	285
uimaj-core/src/main/java/org/apache/uima/ResourceFactory.java	9
uimaj-core/src/main/java/org/apache/uima/ResourceSpecifierFactory.java	130
uimaj-core/src/main/java/org/apache/uima/UIMAException.java	70
uimaj-core/src/main/java/org/apache/uima/UIMAFramework.java	316
uimaj-core/src/main/java/org/apache/uima/UIMARuntimeException.java	96
uimaj-core/src/main/java/org/apache/uima/UIMA_IllegalArgumentException.java	26
uimaj-core/src/main/java/org/apache/uima/UIMA_IllegalStateException.java	33
uimaj-core/src/main/java/org/apache/uima/UIMA_UnsupportedOperationException.java	28
uimaj-core/src/main/java/org/apache/uima/UimaContext.java	47
uimaj-core/src/main/java/org/apache/uima/UimaContextAdmin.java	40
uimaj-core/src/main/java/org/apache/uima/UimaContextAdminBuilder.java	29
uimaj-core/src/main/java/org/apache/uima/UimaContextHolder.java	84
uimaj-core/src/main/java/org/apache/uima/UimaSerializable.java	16
uimaj-core/src/main/java/org/apache/uima/UimaSerializableFSs.java	6
uimaj-core/src/main/java/org/apache/uima/analysis_component/AnalysisComponent.java	20
uimaj-core/src/main/java/org/apache/uima/analysis_component/AnalysisComponent_ImplBase.java	49
uimaj-core/src/main/java/org/apache/uima/analysis_component/Annotator_ImplBase.java	18
uimaj-core/src/main/java/org/apache/uima/analysis_component/CasAnnotator_ImplBase.java	33
uimaj-core/src/main/java/org/apache/uima/analysis_component/CasMultiplier_ImplBase.java	40
uimaj-core/src/main/java/org/apache/uima/analysis_component/CasProcessor.java	14
uimaj-core/src/main/java/org/apache/uima/analysis_component/CasProcessorAnnotator.java	50
uimaj-core/src/main/java/org/apache/uima/analysis_component/JCasAnnotator_ImplBase.java	21
uimaj-core/src/main/java/org/apache/uima/analysis_component/JCasMultiplier_ImplBase.java	29
uimaj-core/src/main/java/org/apache/uima/analysis_component/JCasProcessor.java	14
uimaj-core/src/main/java/org/apache/uima/analysis_component/JCasProcessorAnnotator.java	58
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisEngine.java	69
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisEngineDescription.java	54
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisEngineManagement.java	21
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisEngineProcessException.java	33
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisEngineServiceStub.java	11
uimaj-core/src/main/java/org/apache/uima/analysis_engine/AnalysisProcessData.java	8
uimaj-core/src/main/java/org/apache/uima/analysis_engine/CasIterator.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/JCasIterator.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/ResultNotSupportedException.java	26
uimaj-core/src/main/java/org/apache/uima/analysis_engine/ResultSpecification.java	30
uimaj-core/src/main/java/org/apache/uima/analysis_engine/TaeDescription.java	4
uimaj-core/src/main/java/org/apache/uima/analysis_engine/TextAnalysisEngine.java	4
uimaj-core/src/main/java/org/apache/uima/analysis_engine/TypeOrFeature.java	10
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/AnnotatorConfigurationException.java	29
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/AnnotatorContext.java	35
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/AnnotatorContextException.java	25
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/AnnotatorInitializationException.java	28
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/AnnotatorProcessException.java	24
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/Annotator_ImplBase.java	39
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/BaseAnnotator.java	11
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/GenericAnnotator.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/GenericAnnotator_ImplBase.java	5
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/JTextAnnotator.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/JTextAnnotator_ImplBase.java	4
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/TextAnnotator.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/annotator/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/analysis_engine/asb/ASB.java	26
uimaj-core/src/main/java/org/apache/uima/analysis_engine/asb/impl/ASB_impl.java	442
uimaj-core/src/main/java/org/apache/uima/analysis_engine/asb/impl/FlowContainer.java	98
uimaj-core/src/main/java/org/apache/uima/analysis_engine/asb/impl/FlowControllerContainer.java	203
uimaj-core/src/main/java/org/apache/uima/analysis_engine/asb/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AggregateAnalysisEngine_impl.java	392
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineDescription_impl.java	653
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineImplBase.java	408
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineManagementImpl.java	221
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineManagementImplMBean.java	15
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineProcessorAdapter.java	92
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisEngineProcessorStub.java	14
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnalysisProcessData_impl.java	30
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/AnnotatorContext_impl.java	146
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/EmptyCasIterator.java	18
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/JCasIteratorWrapper.java	28
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/MultiprocessingAnalysisEngine_impl.java	229
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/PearAnalysisEngineWrapper.java	355
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/PrimitiveAnalysisEngine_impl.java	347
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/ResultSpecification_impl.java	439
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsFeat.java	26
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsFeats.java	78
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsFullFeatNames.java	24
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsLang.java	19
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsLangs.java	197
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsType.java	91
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/RsTypesMap.java	193
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/TaeDescription_impl.java	16
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/TypeOrFeature_impl.java	135
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/UimacppAnalysisEngineImpl.java	287
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/compatibility/AnalysisComponentAdapterFactory.java	29
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/compatibility/AnnotatorAdapter.java	166
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/compatibility/CasConsumerAdapter.java	114
uimaj-core/src/main/java/org/apache/uima/analysis_engine/impl/compatibility/CollectionReaderAdapter.java	127
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/AnalysisEngineMetaData.java	9
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/CapabilityLanguageFlow.java	8
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/FixedFlow.java	8
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/FlowConstraints.java	7
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/FlowControllerDeclaration.java	16
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/SofaMapping.java	11
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/impl/AnalysisEngineMetaData_impl.java	195
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/impl/CapabilityLanguageFlow_impl.java	51
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/impl/FixedFlow_impl.java	48
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/impl/FlowControllerDeclaration_impl.java	103
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/impl/SofaMapping_impl.java	43
uimaj-core/src/main/java/org/apache/uima/analysis_engine/metadata/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/analysis_engine/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/analysis_engine/service/impl/AnalysisEngineServiceAdapter.java	113
uimaj-core/src/main/java/org/apache/uima/analysis_engine/service/impl/AnalysisEngineService_impl.java	92
uimaj-core/src/main/java/org/apache/uima/analysis_engine/service/impl/ServiceDataCargo.java	41
uimaj-core/src/main/java/org/apache/uima/cas/AbstractCas.java	4
uimaj-core/src/main/java/org/apache/uima/cas/AbstractCas_ImplBase.java	13
uimaj-core/src/main/java/org/apache/uima/cas/AnnotationBaseFS.java	4
uimaj-core/src/main/java/org/apache/uima/cas/ArrayFS.java	12
uimaj-core/src/main/java/org/apache/uima/cas/BooleanArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/ByteArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/CAS.java	281
uimaj-core/src/main/java/org/apache/uima/cas/CASException.java	35
uimaj-core/src/main/java/org/apache/uima/cas/CASRuntimeException.java	108
uimaj-core/src/main/java/org/apache/uima/cas/CasOwner.java	4
uimaj-core/src/main/java/org/apache/uima/cas/CommonArrayFS.java	31
uimaj-core/src/main/java/org/apache/uima/cas/ComponentInfo.java	4
uimaj-core/src/main/java/org/apache/uima/cas/ConstraintFactory.java	18
uimaj-core/src/main/java/org/apache/uima/cas/DoubleArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/FSBooleanConstraint.java	5
uimaj-core/src/main/java/org/apache/uima/cas/FSComparators.java	7
uimaj-core/src/main/java/org/apache/uima/cas/FSConstraint.java	4
uimaj-core/src/main/java/org/apache/uima/cas/FSFloatConstraint.java	9
uimaj-core/src/main/java/org/apache/uima/cas/FSIndex.java	43
uimaj-core/src/main/java/org/apache/uima/cas/FSIndexRepository.java	34
uimaj-core/src/main/java/org/apache/uima/cas/FSIntConstraint.java	9
uimaj-core/src/main/java/org/apache/uima/cas/FSIterator.java	114
uimaj-core/src/main/java/org/apache/uima/cas/FSMatchConstraint.java	5
uimaj-core/src/main/java/org/apache/uima/cas/FSStringConstraint.java	5
uimaj-core/src/main/java/org/apache/uima/cas/FSTypeConstraint.java	5
uimaj-core/src/main/java/org/apache/uima/cas/Feature.java	8
uimaj-core/src/main/java/org/apache/uima/cas/FeaturePath.java	25
uimaj-core/src/main/java/org/apache/uima/cas/FeatureStructure.java	37
uimaj-core/src/main/java/org/apache/uima/cas/FeatureValuePath.java	16
uimaj-core/src/main/java/org/apache/uima/cas/FloatArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/IntArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/LongArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/Marker.java	6
uimaj-core/src/main/java/org/apache/uima/cas/ParsingException.java	10
uimaj-core/src/main/java/org/apache/uima/cas/SelectFSs.java	89
uimaj-core/src/main/java/org/apache/uima/cas/SerialFormat.java	27
uimaj-core/src/main/java/org/apache/uima/cas/ShortArrayFS.java	10
uimaj-core/src/main/java/org/apache/uima/cas/SofaFS.java	15
uimaj-core/src/main/java/org/apache/uima/cas/SofaID.java	8
uimaj-core/src/main/java/org/apache/uima/cas/StringArrayFS.java	6
uimaj-core/src/main/java/org/apache/uima/cas/Type.java	23
uimaj-core/src/main/java/org/apache/uima/cas/TypeClass.java	24
uimaj-core/src/main/java/org/apache/uima/cas/TypeNameSpace.java	4
uimaj-core/src/main/java/org/apache/uima/cas/TypeSystem.java	24
uimaj-core/src/main/java/org/apache/uima/cas/admin/CASAdminException.java	39
uimaj-core/src/main/java/org/apache/uima/cas/admin/CASFactory.java	38
uimaj-core/src/main/java/org/apache/uima/cas/admin/CASMgr.java	17
uimaj-core/src/main/java/org/apache/uima/cas/admin/FSIndexComparator.java	20
uimaj-core/src/main/java/org/apache/uima/cas/admin/FSIndexRepositoryMgr.java	13
uimaj-core/src/main/java/org/apache/uima/cas/admin/LinearTypeOrder.java	10
uimaj-core/src/main/java/org/apache/uima/cas/admin/LinearTypeOrderBuilder.java	6
uimaj-core/src/main/java/org/apache/uima/cas/admin/TypeSystemMgr.java	16
uimaj-core/src/main/java/org/apache/uima/cas/impl/AllFSs.java	117
uimaj-core/src/main/java/org/apache/uima/cas/impl/AllowPreexistingFS.java	4
uimaj-core/src/main/java/org/apache/uima/cas/impl/AnnotationBaseImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/AnnotationImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/AnnotationImplException.java	67
uimaj-core/src/main/java/org/apache/uima/cas/impl/AnnotationTreeImpl.java	16
uimaj-core/src/main/java/org/apache/uima/cas/impl/AnnotationTreeNodeImpl.java	68
uimaj-core/src/main/java/org/apache/uima/cas/impl/BinaryCasSerDes.java	1141
uimaj-core/src/main/java/org/apache/uima/cas/impl/BinaryCasSerDes4.java	1656
uimaj-core/src/main/java/org/apache/uima/cas/impl/BinaryCasSerDes6.java	1986
uimaj-core/src/main/java/org/apache/uima/cas/impl/BooleanArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/BooleanConstraint.java	33
uimaj-core/src/main/java/org/apache/uima/cas/impl/BuiltinTypeKinds.java	80
uimaj-core/src/main/java/org/apache/uima/cas/impl/ByteArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/ByteHeap.java	75
uimaj-core/src/main/java/org/apache/uima/cas/impl/CASCompleteSerializer.java	26
uimaj-core/src/main/java/org/apache/uima/cas/impl/CASImpl.java	3657
uimaj-core/src/main/java/org/apache/uima/cas/impl/CASMgrSerializer.java	269
uimaj-core/src/main/java/org/apache/uima/cas/impl/CASSerializer.java	451
uimaj-core/src/main/java/org/apache/uima/cas/impl/CasCompare.java	1271
uimaj-core/src/main/java/org/apache/uima/cas/impl/CasSeqAddrMaps.java	51
uimaj-core/src/main/java/org/apache/uima/cas/impl/CasSerializerSupport.java	688
uimaj-core/src/main/java/org/apache/uima/cas/impl/CasState.java	29
uimaj-core/src/main/java/org/apache/uima/cas/impl/CasTypeSystemMapper.java	111
uimaj-core/src/main/java/org/apache/uima/cas/impl/CommonArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/CommonAuxHeap.java	94
uimaj-core/src/main/java/org/apache/uima/cas/impl/CommonSerDes.java	197
uimaj-core/src/main/java/org/apache/uima/cas/impl/CommonSerDesSequential.java	81
uimaj-core/src/main/java/org/apache/uima/cas/impl/ConjunctiveConstraint.java	23
uimaj-core/src/main/java/org/apache/uima/cas/impl/ConstraintFactoryImpl.java	77
uimaj-core/src/main/java/org/apache/uima/cas/impl/CopyOnWriteIndexPart.java	10
uimaj-core/src/main/java/org/apache/uima/cas/impl/DebugFSLogicalStructure.java	348
uimaj-core/src/main/java/org/apache/uima/cas/impl/DebugNameValuePair.java	39
uimaj-core/src/main/java/org/apache/uima/cas/impl/DeferredIndexUpdates.java	18
uimaj-core/src/main/java/org/apache/uima/cas/impl/DisjunctiveConstraint.java	23
uimaj-core/src/main/java/org/apache/uima/cas/impl/DoubleArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/EmbeddedConstraint.java	32
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSBooleanConstraintImpl.java	19
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSClassRegistry.java	682
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSComparator.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSFloatConstraintImpl.java	123
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSGenerator.java	6
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSImplComparator.java	4
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSIndexComparatorImpl.java	189
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSIndexRepositoryImpl.java	1024
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSIntConstraintImpl.java	100
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSIteratorImplBase.java	35
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSRefIterator.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSStringConstraintImpl.java	37
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSTypeConstraintImpl.java	70
uimaj-core/src/main/java/org/apache/uima/cas/impl/FSsTobeAddedback.java	146
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeatureImpl.java	167
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeatureImpl_jcas_only.java	10
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeaturePathImpl.java	367
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeatureStructureImpl.java	10
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeatureStructureImplC.java	1159
uimaj-core/src/main/java/org/apache/uima/cas/impl/FeatureValuePathImpl.java	777
uimaj-core/src/main/java/org/apache/uima/cas/impl/FilteredIterator.java	89
uimaj-core/src/main/java/org/apache/uima/cas/impl/FloatArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/FloatConstraint.java	38
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsGenerator3.java	6
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsGeneratorArray.java	6
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_annotation.java	84
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_bag.java	96
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_flat.java	102
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_iicp.java	275
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_set_sorted.java	105
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_singletype.java	308
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIndex_snapshot.java	88
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_aggregation_common.java	170
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_backwards.java	92
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_bag.java	103
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_bag_pear.java	17
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_limited.java	153
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_multiple_indexes.java	108
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_set_sorted2.java	146
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_set_sorted_pear.java	21
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_singletype.java	30
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_subtypes_ordered.java	331
uimaj-core/src/main/java/org/apache/uima/cas/impl/FsIterator_subtypes_snapshot.java	137
uimaj-core/src/main/java/org/apache/uima/cas/impl/Heap.java	155
uimaj-core/src/main/java/org/apache/uima/cas/impl/Id2FS.java	155
uimaj-core/src/main/java/org/apache/uima/cas/impl/IntArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/IntConstraint.java	38
uimaj-core/src/main/java/org/apache/uima/cas/impl/LLUnambiguousIteratorImpl.java	29
uimaj-core/src/main/java/org/apache/uima/cas/impl/LinearTypeOrderBuilderImpl.java	314
uimaj-core/src/main/java/org/apache/uima/cas/impl/LongArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/LongHeap.java	72
uimaj-core/src/main/java/org/apache/uima/cas/impl/LongSet.java	37
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelCAS.java	138
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelException.java	36
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelIndex.java	107
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelIndexRepository.java	9
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelIterator.java	59
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelIterator_empty.java	67
uimaj-core/src/main/java/org/apache/uima/cas/impl/LowLevelTypeSystem.java	27
uimaj-core/src/main/java/org/apache/uima/cas/impl/MarkerImpl.java	40
uimaj-core/src/main/java/org/apache/uima/cas/impl/MethodHandlesLookup.java	9
uimaj-core/src/main/java/org/apache/uima/cas/impl/OutOfTypeSystemData.java	65
uimaj-core/src/main/java/org/apache/uima/cas/impl/PathConstraint.java	26
uimaj-core/src/main/java/org/apache/uima/cas/impl/SelectFSs_impl.java	1138
uimaj-core/src/main/java/org/apache/uima/cas/impl/Serialization.java	104
uimaj-core/src/main/java/org/apache/uima/cas/impl/ShortArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/ShortHeap.java	64
uimaj-core/src/main/java/org/apache/uima/cas/impl/SlotKinds.java	42
uimaj-core/src/main/java/org/apache/uima/cas/impl/SlotKindsConstants.java	44
uimaj-core/src/main/java/org/apache/uima/cas/impl/SofaFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringArrayFSImpl.java	5
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringConstraint.java	38
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringHeap.java	116
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringHeapDeserializationHelper.java	14
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringMap.java	4
uimaj-core/src/main/java/org/apache/uima/cas/impl/StringSet.java	37
uimaj-core/src/main/java/org/apache/uima/cas/impl/Subiterator.java	793
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl.java	590
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_annot.java	10
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_annotBase.java	11
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_array.java	77
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_list.java	13
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_primitive.java	15
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_string.java	20
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeImpl_stringSubtype.java	24
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeNameSpaceImpl.java	16
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeSystem2Xml.java	124
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeSystemConstants.java	68
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeSystemImpl.java	1314
uimaj-core/src/main/java/org/apache/uima/cas/impl/TypeSystemUtils.java	157
uimaj-core/src/main/java/org/apache/uima/cas/impl/XCASDeserializer.java	795
uimaj-core/src/main/java/org/apache/uima/cas/impl/XCASParsingException.java	67
uimaj-core/src/main/java/org/apache/uima/cas/impl/XCASSerializer.java	567
uimaj-core/src/main/java/org/apache/uima/cas/impl/XMLTypeSystemConsts.java	9
uimaj-core/src/main/java/org/apache/uima/cas/impl/XmiCasDeserializer.java	1307
uimaj-core/src/main/java/org/apache/uima/cas/impl/XmiCasSerializer.java	675
uimaj-core/src/main/java/org/apache/uima/cas/impl/XmiSerializationSharedData.java	239
uimaj-core/src/main/java/org/apache/uima/cas/impl/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/cas/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationFS.java	56
uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationIndex.java	9
uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationPredicates.java	113
uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationTree.java	4
uimaj-core/src/main/java/org/apache/uima/cas/text/AnnotationTreeNode.java	12
uimaj-core/src/main/java/org/apache/uima/cas/text/Language.java	55
uimaj-core/src/main/java/org/apache/uima/cas/text/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/cas_data/CasData.java	9
uimaj-core/src/main/java/org/apache/uima/cas_data/FeatureStructure.java	18
uimaj-core/src/main/java/org/apache/uima/cas_data/FeatureValue.java	5
uimaj-core/src/main/java/org/apache/uima/cas_data/PrimitiveArrayFS.java	7
uimaj-core/src/main/java/org/apache/uima/cas_data/PrimitiveValue.java	7
uimaj-core/src/main/java/org/apache/uima/cas_data/ReferenceArrayFS.java	5
uimaj-core/src/main/java/org/apache/uima/cas_data/ReferenceValue.java	5
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/CasDataImpl.java	29
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/CasDataToXCas.java	176
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/CasDataUtils.java	150
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/FeatureStructureImpl.java	94
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/PrimitiveArrayFSImpl.java	71
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/PrimitiveValueImpl.java	55
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/ReferenceArrayFSImpl.java	35
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/ReferenceValueImpl.java	25
uimaj-core/src/main/java/org/apache/uima/cas_data/impl/XCasToCasDataSaxHandler.java	340
uimaj-core/src/main/java/org/apache/uima/collection/CasConsumer.java	10
uimaj-core/src/main/java/org/apache/uima/collection/CasConsumerDescription.java	6
uimaj-core/src/main/java/org/apache/uima/collection/CasConsumer_ImplBase.java	72
uimaj-core/src/main/java/org/apache/uima/collection/CasInitializer.java	13
uimaj-core/src/main/java/org/apache/uima/collection/CasInitializerDescription.java	7
uimaj-core/src/main/java/org/apache/uima/collection/CasInitializer_ImplBase.java	46
uimaj-core/src/main/java/org/apache/uima/collection/CollectionException.java	25
uimaj-core/src/main/java/org/apache/uima/collection/CollectionProcessingEngine.java	26
uimaj-core/src/main/java/org/apache/uima/collection/CollectionProcessingManager.java	30
uimaj-core/src/main/java/org/apache/uima/collection/CollectionReader.java	18
uimaj-core/src/main/java/org/apache/uima/collection/CollectionReaderDescription.java	6
uimaj-core/src/main/java/org/apache/uima/collection/CollectionReader_ImplBase.java	73
uimaj-core/src/main/java/org/apache/uima/collection/EntityProcessStatus.java	12
uimaj-core/src/main/java/org/apache/uima/collection/StatusCallbackListener.java	6
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/AbortCPMException.java	7
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/AbortCasProcessorException.java	7
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/BaseCPM.java	32
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/BaseCollectionReader.java	13
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/BaseStatusCallbackListener.java	9
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataCollectionReader.java	12
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataCollectionReader_ImplBase.java	44
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataConsumer.java	14
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataConsumer_ImplBase.java	39
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataInitializer.java	11
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataInitializer_ImplBase.java	34
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataProcessor.java	7
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasDataStatusCallbackListener.java	6
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasObjectProcessor.java	10
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/CasProcessor.java	12
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/RecoverableCollectionReader.java	6
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/SkipCasException.java	7
uimaj-core/src/main/java/org/apache/uima/collection/base_cpm/SynchPoint.java	10
uimaj-core/src/main/java/org/apache/uima/collection/impl/CasConsumerDescription_impl.java	85
uimaj-core/src/main/java/org/apache/uima/collection/impl/CasInitializerDescription_impl.java	87
uimaj-core/src/main/java/org/apache/uima/collection/impl/CollectionReaderDescription_impl.java	87
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorConfigurationParameterSettings.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorDeploymentParam.java	10
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorDeploymentParams.java	7
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorErrorHandling.java	10
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorErrorRateThreshold.java	10
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorExecArg.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorExecArgs.java	9
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorExecutable.java	13
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorFilter.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorMaxRestarts.java	10
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorRunInSeperateProcess.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorRuntimeEnvParam.java	8
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CasProcessorTimeout.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCasProcessor.java	43
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCasProcessors.java	20
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCheckpoint.java	11
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCollectionReader.java	18
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCollectionReaderCasInitializer.java	12
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeCollectionReaderIterator.java	10
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeComponentDescriptor.java	13
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeConfiguration.java	19
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeDescription.java	36
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeDescriptorException.java	7
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeInclude.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeIntegratedCasProcessor.java	3
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeLocalCasProcessor.java	12
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeRemoteCasProcessor.java	3
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeResourceManagerConfiguration.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeSofaMapping.java	8
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeSofaMappings.java	6
uimaj-core/src/main/java/org/apache/uima/collection/metadata/CpeTimer.java	5
uimaj-core/src/main/java/org/apache/uima/collection/metadata/NameValuePair.java	7
uimaj-core/src/main/java/org/apache/uima/collection/metadata/OutputQueue.java	8
uimaj-core/src/main/java/org/apache/uima/collection/metadata/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/collection/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/flow/CasFlowController_ImplBase.java	33
uimaj-core/src/main/java/org/apache/uima/flow/CasFlow_ImplBase.java	39
uimaj-core/src/main/java/org/apache/uima/flow/FinalStep.java	12
uimaj-core/src/main/java/org/apache/uima/flow/Flow.java	9
uimaj-core/src/main/java/org/apache/uima/flow/FlowController.java	18
uimaj-core/src/main/java/org/apache/uima/flow/FlowControllerContext.java	8
uimaj-core/src/main/java/org/apache/uima/flow/FlowControllerDescription.java	6
uimaj-core/src/main/java/org/apache/uima/flow/FlowController_ImplBase.java	43
uimaj-core/src/main/java/org/apache/uima/flow/JCasFlowController_ImplBase.java	21
uimaj-core/src/main/java/org/apache/uima/flow/JCasFlow_ImplBase.java	39
uimaj-core/src/main/java/org/apache/uima/flow/ParallelStep.java	15
uimaj-core/src/main/java/org/apache/uima/flow/SimpleStep.java	13
uimaj-core/src/main/java/org/apache/uima/flow/SimpleStepWithResultSpec.java	16
uimaj-core/src/main/java/org/apache/uima/flow/Step.java	3
uimaj-core/src/main/java/org/apache/uima/flow/impl/AnalysisSequenceCapabilityNode.java	56
uimaj-core/src/main/java/org/apache/uima/flow/impl/CapabilityLanguageFlowController.java	133
uimaj-core/src/main/java/org/apache/uima/flow/impl/CapabilityLanguageFlowObject.java	100
uimaj-core/src/main/java/org/apache/uima/flow/impl/FixedFlowController.java	205
uimaj-core/src/main/java/org/apache/uima/flow/impl/FlowControllerContext_impl.java	33
uimaj-core/src/main/java/org/apache/uima/flow/impl/FlowControllerDescription_impl.java	80
uimaj-core/src/main/java/org/apache/uima/impl/AnalysisEngineFactory_impl.java	59
uimaj-core/src/main/java/org/apache/uima/impl/CasConsumerFactory_impl.java	88
uimaj-core/src/main/java/org/apache/uima/impl/CasInitializerFactory_impl.java	53
uimaj-core/src/main/java/org/apache/uima/impl/ChildUimaContext_impl.java	76
uimaj-core/src/main/java/org/apache/uima/impl/CollectionReaderFactory_impl.java	75
uimaj-core/src/main/java/org/apache/uima/impl/CompositeResourceFactory_impl.java	43
uimaj-core/src/main/java/org/apache/uima/impl/CustomResourceFactory_impl.java	60
uimaj-core/src/main/java/org/apache/uima/impl/ResourceSpecifierFactory_impl.java	357
uimaj-core/src/main/java/org/apache/uima/impl/RootUimaContext_impl.java	77
uimaj-core/src/main/java/org/apache/uima/impl/SofaID_impl.java	30
uimaj-core/src/main/java/org/apache/uima/impl/UIMAFramework_impl.java	455
uimaj-core/src/main/java/org/apache/uima/impl/UimaContext_ImplBase.java	504
uimaj-core/src/main/java/org/apache/uima/impl/Util.java	59
uimaj-core/src/main/java/org/apache/uima/impl/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/internal/util/AnalysisEnginePool.java	125
uimaj-core/src/main/java/org/apache/uima/internal/util/ArrayUtils.java	18
uimaj-core/src/main/java/org/apache/uima/internal/util/BinaryTree.java	38
uimaj-core/src/main/java/org/apache/uima/internal/util/BrowserUtil.java	88
uimaj-core/src/main/java/org/apache/uima/internal/util/CharArraySpanMap.java	144
uimaj-core/src/main/java/org/apache/uima/internal/util/CharArrayString.java	188
uimaj-core/src/main/java/org/apache/uima/internal/util/CharacterUtils.java	135
uimaj-core/src/main/java/org/apache/uima/internal/util/ClassLoaderUtils.java	80
uimaj-core/src/main/java/org/apache/uima/internal/util/Class_TCCL.java	73
uimaj-core/src/main/java/org/apache/uima/internal/util/CommandLineParser.java	77
uimaj-core/src/main/java/org/apache/uima/internal/util/Common_hash_support.java	292
uimaj-core/src/main/java/org/apache/uima/internal/util/ComparableFSIterator.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/ComparableIntIterator.java	3
uimaj-core/src/main/java/org/apache/uima/internal/util/CopyOnWriteObjHashSet.java	91
uimaj-core/src/main/java/org/apache/uima/internal/util/CopyOnWriteOrderedFsSet_array.java	75
uimaj-core/src/main/java/org/apache/uima/internal/util/EncodedPrintStream.java	56
uimaj-core/src/main/java/org/apache/uima/internal/util/Graph.java	30
uimaj-core/src/main/java/org/apache/uima/internal/util/GraphNode.java	44
uimaj-core/src/main/java/org/apache/uima/internal/util/I18nUtil.java	60
uimaj-core/src/main/java/org/apache/uima/internal/util/I18nx_impl.java	101
uimaj-core/src/main/java/org/apache/uima/internal/util/InstrumentationFacility_impl.java	31
uimaj-core/src/main/java/org/apache/uima/internal/util/Int2IntArrayMapFixedSize.java	31
uimaj-core/src/main/java/org/apache/uima/internal/util/Int2ObjHashMap.java	222
uimaj-core/src/main/java/org/apache/uima/internal/util/Int2ObjListMap.java	22
uimaj-core/src/main/java/org/apache/uima/internal/util/IntArrayUtils.java	108
uimaj-core/src/main/java/org/apache/uima/internal/util/IntBitSet.java	165
uimaj-core/src/main/java/org/apache/uima/internal/util/IntComparator.java	4
uimaj-core/src/main/java/org/apache/uima/internal/util/IntHashSet.java	433
uimaj-core/src/main/java/org/apache/uima/internal/util/IntKeyValueIterator.java	4
uimaj-core/src/main/java/org/apache/uima/internal/util/IntListIterator.java	22
uimaj-core/src/main/java/org/apache/uima/internal/util/IntPointerIterator.java	11
uimaj-core/src/main/java/org/apache/uima/internal/util/IntSet.java	168
uimaj-core/src/main/java/org/apache/uima/internal/util/IntStack.java	29
uimaj-core/src/main/java/org/apache/uima/internal/util/IntVector.java	359
uimaj-core/src/main/java/org/apache/uima/internal/util/JavaTimer.java	40
uimaj-core/src/main/java/org/apache/uima/internal/util/JmxMBeanAgent.java	76
uimaj-core/src/main/java/org/apache/uima/internal/util/MetaDataObjectUtils.java	21
uimaj-core/src/main/java/org/apache/uima/internal/util/Misc.java	826
uimaj-core/src/main/java/org/apache/uima/internal/util/MsgLocalizationClassLoader.java	92
uimaj-core/src/main/java/org/apache/uima/internal/util/Obj2IntIdentityHashMap.java	173
uimaj-core/src/main/java/org/apache/uima/internal/util/ObjHashSet.java	226
uimaj-core/src/main/java/org/apache/uima/internal/util/OrderedFsSet_array.java	332
uimaj-core/src/main/java/org/apache/uima/internal/util/OrderedFsSet_array2.java	1260
uimaj-core/src/main/java/org/apache/uima/internal/util/Pair.java	46
uimaj-core/src/main/java/org/apache/uima/internal/util/PositiveIntSet.java	26
uimaj-core/src/main/java/org/apache/uima/internal/util/PositiveIntSet_impl.java	401
uimaj-core/src/main/java/org/apache/uima/internal/util/ReplaceStringInFiles.java	120
uimaj-core/src/main/java/org/apache/uima/internal/util/ResourcePool.java	102
uimaj-core/src/main/java/org/apache/uima/internal/util/SerializationUtils.java	120
uimaj-core/src/main/java/org/apache/uima/internal/util/ServiceLoaderUtil.java	80
uimaj-core/src/main/java/org/apache/uima/internal/util/SortedIntSet.java	57
uimaj-core/src/main/java/org/apache/uima/internal/util/StringToIntMap.java	31
uimaj-core/src/main/java/org/apache/uima/internal/util/StringUtils.java	30
uimaj-core/src/main/java/org/apache/uima/internal/util/SymbolTable.java	110
uimaj-core/src/main/java/org/apache/uima/internal/util/SystemEnvReader.java	32
uimaj-core/src/main/java/org/apache/uima/internal/util/TextAnalysisEnginePool.java	31
uimaj-core/src/main/java/org/apache/uima/internal/util/TextStringTokenizer.java	212
uimaj-core/src/main/java/org/apache/uima/internal/util/TextTokenizer.java	200
uimaj-core/src/main/java/org/apache/uima/internal/util/TimeSpan.java	226
uimaj-core/src/main/java/org/apache/uima/internal/util/Timer.java	47
uimaj-core/src/main/java/org/apache/uima/internal/util/UIMAClassLoader.java	210
uimaj-core/src/main/java/org/apache/uima/internal/util/UIMALogFormatter.java	47
uimaj-core/src/main/java/org/apache/uima/internal/util/UIMAStreamHandler.java	17
uimaj-core/src/main/java/org/apache/uima/internal/util/UUIDGenerator.java	19
uimaj-core/src/main/java/org/apache/uima/internal/util/UtilError.java	52
uimaj-core/src/main/java/org/apache/uima/internal/util/Utilities.java	8
uimaj-core/src/main/java/org/apache/uima/internal/util/WeakIdentityMap.java	143
uimaj-core/src/main/java/org/apache/uima/internal/util/XMLUtils.java	362
uimaj-core/src/main/java/org/apache/uima/internal/util/XmlAttribute.java	9
uimaj-core/src/main/java/org/apache/uima/internal/util/XmlElementName.java	11
uimaj-core/src/main/java/org/apache/uima/internal/util/XmlElementNameAndContents.java	17
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Consumer2.java	5
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Consumer_T_int_withIOException.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Consumer_T_withIOException.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Consumer_withSaxException.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/DeserBinaryIndexes.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/IntConsumer_withIOException.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Runnable_withException.java	5
uimaj-core/src/main/java/org/apache/uima/internal/util/function/Runnable_withSaxException.java	6
uimaj-core/src/main/java/org/apache/uima/internal/util/function/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/CompIntArrayRBT.java	17
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/Int2IntRBT.java	307
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/IntArrayRBT.java	244
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/IntArrayRBTcommon.java	550
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/IntRBTArray.java	75
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/IntRBTNode.java	473
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/IntRedBlackTree.java	123
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/RBTKeyValuePair.java	15
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/RBTNode.java	432
uimaj-core/src/main/java/org/apache/uima/internal/util/rb_trees/RedBlackTree.java	195
uimaj-core/src/main/java/org/apache/uima/jcas/JCas.java	235
uimaj-core/src/main/java/org/apache/uima/jcas/JCasRegistry.java	42
uimaj-core/src/main/java/org/apache/uima/jcas/JFSIndexRepository.java	20
uimaj-core/src/main/java/org/apache/uima/jcas/cas/AnnotationBase.java	73
uimaj-core/src/main/java/org/apache/uima/jcas/cas/AnnotationBase_Type.java	36
uimaj-core/src/main/java/org/apache/uima/jcas/cas/ArrayFSImpl.java	6
uimaj-core/src/main/java/org/apache/uima/jcas/cas/BooleanArray.java	121
uimaj-core/src/main/java/org/apache/uima/jcas/cas/ByteArray.java	129
uimaj-core/src/main/java/org/apache/uima/jcas/cas/CommonList.java	163
uimaj-core/src/main/java/org/apache/uima/jcas/cas/CommonPrimitiveArray.java	5
uimaj-core/src/main/java/org/apache/uima/jcas/cas/DoubleArray.java	147
uimaj-core/src/main/java/org/apache/uima/jcas/cas/EmptyFSList.java	27
uimaj-core/src/main/java/org/apache/uima/jcas/cas/EmptyFloatList.java	27
uimaj-core/src/main/java/org/apache/uima/jcas/cas/EmptyIntegerList.java	27
uimaj-core/src/main/java/org/apache/uima/jcas/cas/EmptyList.java	4
uimaj-core/src/main/java/org/apache/uima/jcas/cas/EmptyStringList.java	27
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FSArray.java	202
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FSArrayList.java	586
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FSHashSet.java	290
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FSLinkedHashSet.java	24
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FSList.java	87
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FloatArray.java	127
uimaj-core/src/main/java/org/apache/uima/jcas/cas/FloatList.java	57
uimaj-core/src/main/java/org/apache/uima/jcas/cas/Int2FS.java	194
uimaj-core/src/main/java/org/apache/uima/jcas/cas/IntegerArray.java	156
uimaj-core/src/main/java/org/apache/uima/jcas/cas/IntegerArrayList.java	283
uimaj-core/src/main/java/org/apache/uima/jcas/cas/IntegerList.java	81
uimaj-core/src/main/java/org/apache/uima/jcas/cas/LongArray.java	144
uimaj-core/src/main/java/org/apache/uima/jcas/cas/NonEmptyFSList.java	99
uimaj-core/src/main/java/org/apache/uima/jcas/cas/NonEmptyFloatList.java	93
uimaj-core/src/main/java/org/apache/uima/jcas/cas/NonEmptyIntegerList.java	107
uimaj-core/src/main/java/org/apache/uima/jcas/cas/NonEmptyList.java	3
uimaj-core/src/main/java/org/apache/uima/jcas/cas/NonEmptyStringList.java	93
uimaj-core/src/main/java/org/apache/uima/jcas/cas/SelectViaCopyToArray.java	25
uimaj-core/src/main/java/org/apache/uima/jcas/cas/ShortArray.java	129
uimaj-core/src/main/java/org/apache/uima/jcas/cas/Sofa.java	157
uimaj-core/src/main/java/org/apache/uima/jcas/cas/StringArray.java	115
uimaj-core/src/main/java/org/apache/uima/jcas/cas/StringList.java	60
uimaj-core/src/main/java/org/apache/uima/jcas/cas/TOP.java	40
uimaj-core/src/main/java/org/apache/uima/jcas/cas/TOP_Type.java	60
uimaj-core/src/main/java/org/apache/uima/jcas/cas/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/jcas/impl/JCasHashMap.java	215
uimaj-core/src/main/java/org/apache/uima/jcas/impl/JCasHashMapSubMap.java	271
uimaj-core/src/main/java/org/apache/uima/jcas/impl/JCasImpl.java	358
uimaj-core/src/main/java/org/apache/uima/jcas/impl/JFSIndexRepositoryImpl.java	55
uimaj-core/src/main/java/org/apache/uima/jcas/impl/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/jcas/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/jcas/tcas/Annotation.java	163
uimaj-core/src/main/java/org/apache/uima/jcas/tcas/Annotation_Type.java	45
uimaj-core/src/main/java/org/apache/uima/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/pear/tools/InstallationController.java	1025
uimaj-core/src/main/java/org/apache/uima/pear/tools/InstallationDescriptor.java	526
uimaj-core/src/main/java/org/apache/uima/pear/tools/InstallationDescriptorHandler.java	450
uimaj-core/src/main/java/org/apache/uima/pear/tools/InstallationProcessor.java	235
uimaj-core/src/main/java/org/apache/uima/pear/tools/InstallationTester.java	221
uimaj-core/src/main/java/org/apache/uima/pear/tools/LocalInstallationAgent.java	217
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageBrowser.java	216
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageCreator.java	178
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageCreatorException.java	19
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageInstaller.java	122
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageInstallerException.java	20
uimaj-core/src/main/java/org/apache/uima/pear/tools/PackageSelectorGUI.java	97
uimaj-core/src/main/java/org/apache/uima/pear/tools/SimplePackageSelector.java	118
uimaj-core/src/main/java/org/apache/uima/pear/tools/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/pear/util/FileUtil.java	746
uimaj-core/src/main/java/org/apache/uima/pear/util/MessageRouter.java	128
uimaj-core/src/main/java/org/apache/uima/pear/util/ProcessUtil.java	150
uimaj-core/src/main/java/org/apache/uima/pear/util/StringUtil.java	103
uimaj-core/src/main/java/org/apache/uima/pear/util/UIMAUtil.java	136
uimaj-core/src/main/java/org/apache/uima/pear/util/XMLUtil.java	417
uimaj-core/src/main/java/org/apache/uima/pear/util/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/resource/CasDefinition.java	102
uimaj-core/src/main/java/org/apache/uima/resource/CasManager.java	19
uimaj-core/src/main/java/org/apache/uima/resource/ConfigurableDataResourceSpecifier.java	8
uimaj-core/src/main/java/org/apache/uima/resource/ConfigurableResource.java	8
uimaj-core/src/main/java/org/apache/uima/resource/ConfigurableResource_ImplBase.java	27
uimaj-core/src/main/java/org/apache/uima/resource/ConfigurationManager.java	17
uimaj-core/src/main/java/org/apache/uima/resource/CustomResourceSpecifier.java	7
uimaj-core/src/main/java/org/apache/uima/resource/DataResource.java	16
uimaj-core/src/main/java/org/apache/uima/resource/ExternalResourceDependency.java	12
uimaj-core/src/main/java/org/apache/uima/resource/ExternalResourceDescription.java	13
uimaj-core/src/main/java/org/apache/uima/resource/FileLanguageResourceSpecifier.java	7
uimaj-core/src/main/java/org/apache/uima/resource/FileResourceSpecifier.java	7
uimaj-core/src/main/java/org/apache/uima/resource/JMSMessagingSpecifier.java	12
uimaj-core/src/main/java/org/apache/uima/resource/MQMessagingSpecifier.java	7
uimaj-core/src/main/java/org/apache/uima/resource/MailMessagingSpecifier.java	11
uimaj-core/src/main/java/org/apache/uima/resource/ManagementObject.java	4
uimaj-core/src/main/java/org/apache/uima/resource/MessagingSpecifier.java	23
uimaj-core/src/main/java/org/apache/uima/resource/Parameter.java	8
uimaj-core/src/main/java/org/apache/uima/resource/ParameterizedDataResource.java	4
uimaj-core/src/main/java/org/apache/uima/resource/PearSpecifier.java	12
uimaj-core/src/main/java/org/apache/uima/resource/RelativePathResolver.java	22
uimaj-core/src/main/java/org/apache/uima/resource/Resource.java	25
uimaj-core/src/main/java/org/apache/uima/resource/ResourceAccessException.java	26
uimaj-core/src/main/java/org/apache/uima/resource/ResourceConfigurationException.java	38
uimaj-core/src/main/java/org/apache/uima/resource/ResourceCreationSpecifier.java	23
uimaj-core/src/main/java/org/apache/uima/resource/ResourceInitializationException.java	101
uimaj-core/src/main/java/org/apache/uima/resource/ResourceManager.java	50
uimaj-core/src/main/java/org/apache/uima/resource/ResourceManagerPearWrapper.java	5
uimaj-core/src/main/java/org/apache/uima/resource/ResourceProcessException.java	26
uimaj-core/src/main/java/org/apache/uima/resource/ResourceServiceException.java	28
uimaj-core/src/main/java/org/apache/uima/resource/ResourceServiceSpecifier.java	3
uimaj-core/src/main/java/org/apache/uima/resource/ResourceServiceStub.java	7
uimaj-core/src/main/java/org/apache/uima/resource/ResourceSpecifier.java	4
uimaj-core/src/main/java/org/apache/uima/resource/ResourceSpecifierList.java	5
uimaj-core/src/main/java/org/apache/uima/resource/Resource_ImplBase.java	209
uimaj-core/src/main/java/org/apache/uima/resource/Session.java	6
uimaj-core/src/main/java/org/apache/uima/resource/SharedResourceObject.java	4
uimaj-core/src/main/java/org/apache/uima/resource/URISpecifier.java	15
uimaj-core/src/main/java/org/apache/uima/resource/impl/CasManager_impl.java	258
uimaj-core/src/main/java/org/apache/uima/resource/impl/ConfigurableDataResourceSpecifier_impl.java	37
uimaj-core/src/main/java/org/apache/uima/resource/impl/ConfigurableDataResource_impl.java	85
uimaj-core/src/main/java/org/apache/uima/resource/impl/ConfigurationManagerImplBase.java	383
uimaj-core/src/main/java/org/apache/uima/resource/impl/ConfigurationManager_impl.java	153
uimaj-core/src/main/java/org/apache/uima/resource/impl/CustomResourceSpecifier_impl.java	40
uimaj-core/src/main/java/org/apache/uima/resource/impl/DataResource_impl.java	105
uimaj-core/src/main/java/org/apache/uima/resource/impl/ExternalResourceDependency_impl.java	54
uimaj-core/src/main/java/org/apache/uima/resource/impl/ExternalResourceDescription_impl.java	56
uimaj-core/src/main/java/org/apache/uima/resource/impl/FileLanguageResourceSpecifier_impl.java	36
uimaj-core/src/main/java/org/apache/uima/resource/impl/FileLanguageResource_impl.java	74
uimaj-core/src/main/java/org/apache/uima/resource/impl/FileResourceSpecifier_impl.java	42
uimaj-core/src/main/java/org/apache/uima/resource/impl/Parameter_impl.java	57
uimaj-core/src/main/java/org/apache/uima/resource/impl/PearSpecifier_impl.java	54
uimaj-core/src/main/java/org/apache/uima/resource/impl/RelativePathResolver_impl.java	227
uimaj-core/src/main/java/org/apache/uima/resource/impl/ResourceCreationSpecifier_impl.java	201
uimaj-core/src/main/java/org/apache/uima/resource/impl/ResourceManager_impl.java	555
uimaj-core/src/main/java/org/apache/uima/resource/impl/ResourceState_impl.java	13
uimaj-core/src/main/java/org/apache/uima/resource/impl/SessionNamespaceView_impl.java	22
uimaj-core/src/main/java/org/apache/uima/resource/impl/Session_impl.java	17
uimaj-core/src/main/java/org/apache/uima/resource/impl/URISpecifier_impl.java	64
uimaj-core/src/main/java/org/apache/uima/resource/metadata/AllowedValue.java	7
uimaj-core/src/main/java/org/apache/uima/resource/metadata/Capability.java	29
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ConfigurationGroup.java	10
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ConfigurationParameter.java	26
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ConfigurationParameterDeclarations.java	25
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ConfigurationParameterSettings.java	11
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ExternalResourceBinding.java	8
uimaj-core/src/main/java/org/apache/uima/resource/metadata/FeatureDescription.java	13
uimaj-core/src/main/java/org/apache/uima/resource/metadata/FsIndexCollection.java	26
uimaj-core/src/main/java/org/apache/uima/resource/metadata/FsIndexDescription.java	15
uimaj-core/src/main/java/org/apache/uima/resource/metadata/FsIndexKeyDescription.java	11
uimaj-core/src/main/java/org/apache/uima/resource/metadata/Import.java	12
uimaj-core/src/main/java/org/apache/uima/resource/metadata/LanguagePrecondition.java	6
uimaj-core/src/main/java/org/apache/uima/resource/metadata/MetaDataObject.java	20
uimaj-core/src/main/java/org/apache/uima/resource/metadata/MimeTypePrecondition.java	6
uimaj-core/src/main/java/org/apache/uima/resource/metadata/NameValuePair.java	7
uimaj-core/src/main/java/org/apache/uima/resource/metadata/OperationalProperties.java	11
uimaj-core/src/main/java/org/apache/uima/resource/metadata/Precondition.java	6
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ProcessingResourceMetaData.java	23
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ResourceManagerConfiguration.java	34
uimaj-core/src/main/java/org/apache/uima/resource/metadata/ResourceMetaData.java	26
uimaj-core/src/main/java/org/apache/uima/resource/metadata/SimplePrecondition.java	24
uimaj-core/src/main/java/org/apache/uima/resource/metadata/TypeDescription.java	17
uimaj-core/src/main/java/org/apache/uima/resource/metadata/TypePriorities.java	27
uimaj-core/src/main/java/org/apache/uima/resource/metadata/TypePriorityList.java	8
uimaj-core/src/main/java/org/apache/uima/resource/metadata/TypeSystemDescription.java	27
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/AllowedValue_impl.java	36
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/Capability_impl.java	219
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ConfigurationGroup_impl.java	90
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ConfigurationParameterDeclarations_impl.java	267
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ConfigurationParameterSettings_impl.java	225
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ConfigurationParameter_impl.java	183
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ExternalResourceBinding_impl.java	31
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/FeatureDescription_impl.java	74
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/FsIndexCollectionImportResolverAdapter.java	49
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/FsIndexCollection_impl.java	124
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/FsIndexDescription_impl.java	59
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/FsIndexKeyDescription_impl.java	98
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ImportResolver.java	162
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/Import_impl.java	155
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/LanguagePrecondition_impl.java	97
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/MetaDataObjectSerializer_indent.java	248
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/MetaDataObjectSerializer_plain.java	99
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/MetaDataObject_impl.java	1013
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/MimeTypePrecondition_impl.java	58
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/NameValuePair_impl.java	36
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/OperationalProperties_impl.java	63
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ProcessingResourceMetaData_impl.java	19
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/PropertyXmlInfo.java	26
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ResourceManagerConfiguration_impl.java	251
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/ResourceMetaData_impl.java	235
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/SimplePrecondition_impl.java	88
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypeDescription_impl.java	99
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypePrioritiesImportResolverAdapter.java	49
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypePriorities_impl.java	152
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypePriorityList_impl.java	43
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypeSystemDescriptionImportResolverAdapter.java	49
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/TypeSystemDescription_impl.java	129
uimaj-core/src/main/java/org/apache/uima/resource/metadata/impl/XmlizationInfo.java	15
uimaj-core/src/main/java/org/apache/uima/resource/metadata/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/resource/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/resource/service/impl/ResourceServiceAdapter.java	28
uimaj-core/src/main/java/org/apache/uima/resource/service/impl/ResourceService_impl.java	25
uimaj-core/src/main/java/org/apache/uima/search/Attribute.java	9
uimaj-core/src/main/java/org/apache/uima/search/Filter.java	9
uimaj-core/src/main/java/org/apache/uima/search/IndexBuildItem.java	11
uimaj-core/src/main/java/org/apache/uima/search/IndexBuildSpecification.java	7
uimaj-core/src/main/java/org/apache/uima/search/IndexRule.java	7
uimaj-core/src/main/java/org/apache/uima/search/IndexingException.java	36
uimaj-core/src/main/java/org/apache/uima/search/Mapping.java	7
uimaj-core/src/main/java/org/apache/uima/search/Style.java	15
uimaj-core/src/main/java/org/apache/uima/search/impl/Attribute_impl.java	51
uimaj-core/src/main/java/org/apache/uima/search/impl/Filter_impl.java	64
uimaj-core/src/main/java/org/apache/uima/search/impl/IndexBuildItem_impl.java	44
uimaj-core/src/main/java/org/apache/uima/search/impl/IndexBuildSpecification_impl.java	26
uimaj-core/src/main/java/org/apache/uima/search/impl/IndexRule_impl.java	24
uimaj-core/src/main/java/org/apache/uima/search/impl/Mapping_impl.java	33
uimaj-core/src/main/java/org/apache/uima/search/impl/Style_impl.java	70
uimaj-core/src/main/java/org/apache/uima/search/impl/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/search/package-info.java	1
uimaj-core/src/main/java/org/apache/uima/spi/FsIndexCollectionProvider.java	7
uimaj-core/src/main/java/org/apache/uima/spi/JCasClassProvider.java	7
uimaj-core/src/main/java/org/apache/uima/spi/TypePrioritiesProvider.java	7
uimaj-core/src/main/java/org/apache/uima/spi/TypeSystemDescriptionProvider.java	7
uimaj-core/src/main/java/org/apache/uima/spi/TypeSystemProvider.java	34
uimaj-core/src/main/java/org/apache/uima/spi/TypeSystemProvider_ImplBase.java	97
uimaj-core/src/main/java/org/apache/uima/uimacpp/CppUimajEngine.java	273
uimaj-core/src/main/java/org/apache/uima/uimacpp/UimacppAnalysisComponent.java	291
uimaj-core/src/main/java/org/apache/uima/uimacpp/UimacppEngine.java	320
uimaj-core/src/main/java/org/apache/uima/uimacpp/UimacppException.java	46
uimaj-core/src/main/java/org/apache/uima/util/AnalysisEnginePerformanceReports.java	129
uimaj-core/src/main/java/org/apache/uima/util/AnalysisEngineUtils.java	29
uimaj-core/src/main/java/org/apache/uima/util/AutoCloseableNoException.java	5
uimaj-core/src/main/java/org/apache/uima/util/CasCopier.java	378
uimaj-core/src/main/java/org/apache/uima/util/CasCreationUtils.java	1109
uimaj-core/src/main/java/org/apache/uima/util/CasIOUtils.java	205
uimaj-core/src/main/java/org/apache/uima/util/CasLoadMode.java	6
uimaj-core/src/main/java/org/apache/uima/util/CasPool.java	161
uimaj-core/src/main/java/org/apache/uima/util/CasPoolManagement.java	6
uimaj-core/src/main/java/org/apache/uima/util/CasToInlineXml.java	235
uimaj-core/src/main/java/org/apache/uima/util/ConcurrentHashMapWithProducer.java	30
uimaj-core/src/main/java/org/apache/uima/util/ConsumerCasUtils.java	49
uimaj-core/src/main/java/org/apache/uima/util/FileUtils.java	195
uimaj-core/src/main/java/org/apache/uima/util/InstrumentationFacility.java	8
uimaj-core/src/main/java/org/apache/uima/util/IntEntry.java	39
uimaj-core/src/main/java/org/apache/uima/util/InvalidXMLException.java	39
uimaj-core/src/main/java/org/apache/uima/util/IteratorNvc.java	5
uimaj-core/src/main/java/org/apache/uima/util/JCasPool.java	89
uimaj-core/src/main/java/org/apache/uima/util/Level.java	64
uimaj-core/src/main/java/org/apache/uima/util/Logger.java	78
uimaj-core/src/main/java/org/apache/uima/util/LoggerPrintStream.java	106
uimaj-core/src/main/java/org/apache/uima/util/MessageReport.java	31
uimaj-core/src/main/java/org/apache/uima/util/Misc.java	6
uimaj-core/src/main/java/org/apache/uima/util/NameClassPair.java	43
uimaj-core/src/main/java/org/apache/uima/util/ProcessTrace.java	20
uimaj-core/src/main/java/org/apache/uima/util/ProcessTraceEvent.java	19
uimaj-core/src/main/java/org/apache/uima/util/Progress.java	9
uimaj-core/src/main/java/org/apache/uima/util/ProgressImpl.java	59
uimaj-core/src/main/java/org/apache/uima/util/SaxDeserializer.java	5
uimaj-core/src/main/java/org/apache/uima/util/Settings.java	13
uimaj-core/src/main/java/org/apache/uima/util/SimpleResourceFactory.java	85
uimaj-core/src/main/java/org/apache/uima/util/TCasFormatter.java	8
uimaj-core/src/main/java/org/apache/uima/util/TCasToInlineXml.java	231
uimaj-core/src/main/java/org/apache/uima/util/TypeSystemUtil.java	217
uimaj-core/src/main/java/org/apache/uima/util/UimaTimer.java	10
uimaj-core/src/main/java/org/apache/uima/util/UriUtils.java	22
uimaj-core/src/main/java/org/apache/uima/util/XMLInputSource.java	57
uimaj-core/src/main/java/org/apache/uima/util/XMLParser.java	117
uimaj-core/src/main/java/org/apache/uima/util/XMLSerializer.java	286
uimaj-core/src/main/java/org/apache/uima/util/XMLizable.java	17
uimaj-core/src/main/java/org/apache/uima/util/XmlCasDeserializer.java	90
uimaj-core/src/main/java/org/apache/uima/util/XmlCasSerializer.java	16
uimaj-core/src/main/java/org/apache/uima/util/impl/CasPoolManagementImpl.java	34
uimaj-core/src/main/java/org/apache/uima/util/impl/CasPoolManagementImplMBean.java	5
uimaj-core/src/main/java/org/apache/uima/util/impl/Constants.java	18
uimaj-core/src/main/java/org/apache/uima/util/impl/DataIO.java	348
uimaj-core/src/main/java/org/apache/uima/util/impl/JSR47Logger_impl.java	205
uimaj-core/src/main/java/org/apache/uima/util/impl/Log4jLogger_impl.java	222
uimaj-core/src/main/java/org/apache/uima/util/impl/Logger_common_impl.java	727
uimaj-core/src/main/java/org/apache/uima/util/impl/Logger_impl.java	137
uimaj-core/src/main/java/org/apache/uima/util/impl/OptimizeStrings.java	213
uimaj-core/src/main/java/org/apache/uima/util/impl/ProcessTraceEvent_impl.java	146
uimaj-core/src/main/java/org/apache/uima/util/impl/ProcessTrace_impl.java	258
uimaj-core/src/main/java/org/apache/uima/util/impl/SaxDeserializer_impl.java	153
uimaj-core/src/main/java/org/apache/uima/util/impl/SerializationMeasures.java	273
uimaj-core/src/main/java/org/apache/uima/util/impl/Settings_impl.java	312
uimaj-core/src/main/java/org/apache/uima/util/impl/Slf4jLogger_impl.java	284
uimaj-core/src/main/java/org/apache/uima/util/impl/XMLParser_impl.java	519
uimaj-core/src/main/java/org/apache/uima/util/package-info.java	1
uimaj-core/src/main/resources/org/apache/uima/flow/CapabilityLanguageFlowController.xml	20
uimaj-core/src/main/resources/org/apache/uima/flow/FixedFlowController.xml	42
uimaj-core/src/main/resources/org/apache/uima/impl/factoryConfig.xml	269
uimaj-core/src/main/resources/org/apache/uima/semibuiltins.xml	81
uimaj-core/src/main/versionJava/org/apache/uima/impl/UimaVersion.java	18
uimaj-cpe/src/main/java/org/apache/uima/cas_data/impl/vinci/VinciCasDataConverter.java	68
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/CasConverter.java	63
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/CollectionProcessingEngine_impl.java	103
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/EntityProcessStatusImpl.java	87
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/CasProcessorConfiguration.java	29
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/CasProcessorController.java	16
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/KillPipelineException.java	7
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/ProcessingContainer.java	58
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/RunnableContainer.java	5
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/ServiceConnectionException.java	10
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/deployer/CPEDeployer.java	8
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/deployer/CasProcessorDeployer.java	13
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/base_cpm/container/deployer/CasProcessorDeploymentException.java	27
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/BaseCPMImpl.java	717
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/CPEConfig.java	61
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/CPMException.java	7
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/CPMImpl.java	87
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/Checkpoint.java	279
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/CheckpointConfig.java	60
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/CheckpointData.java	30
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/Constants.java	87
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/StatusCallbackListenerImpl.java	103
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/CPEContext.java	10
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/CPEFactory.java	974
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/CasObjectNetworkCasProcessorImpl.java	161
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/CasProcessorConfigurationJAXBImpl.java	458
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/NetworkCasProcessorImpl.java	232
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/ProcessingContainer_Impl.java	955
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/ServiceProxyPool.java	117
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/CPEDeployerDefaultImpl.java	205
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/DeployFactory.java	75
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/FencedProcessReaper.java	26
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/JavaApplication.java	101
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/NonJavaApplication.java	64
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/RunnableApplication.java	139
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/VinciTAP.java	988
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/socket/OFSocketTransportImpl.java	92
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/socket/ProcessControllerAdapter.java	6
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/socket/SocketCasProcessorDeployer.java	221
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/socket/SocketTransport.java	16
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/vinci/VinciCasProcessorDeployer.java	1066
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/vns/LocalVNS.java	314
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/vns/VNSQuery.java	138
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/container/deployer/vns/VinciServiceInfo.java	33
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/ArtifactProducer.java	618
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/BoundedWorkQueue.java	150
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/CPECasPool.java	105
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/CPMChunkTimeoutException.java	22
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/CPMEngine.java	2167
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/CPMExecutorService.java	108
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/ConsumerCasUtils.java	40
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/DebugControlThread.java	191
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/EOFToken.java	3
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/NonThreadedProcessingUnit.java	1049
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/ProcessingUnit.java	1549
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/SequencedQueue.java	328
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/engine/WorkUnit.java	25
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/CPMUtils.java	275
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/CasMetaData.java	42
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/ChunkMetadata.java	49
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/ConfigurableFeature.java	55
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/CpmLocalizedMessage.java	23
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/Execute.java	19
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/ExpirationTimer.java	34
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/FeatureMap.java	34
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/Filter.java	202
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/JavaTimer.java	40
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/QueueEntity.java	15
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/Timer.java	12
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/TimerFactory.java	67
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/TypeComplianceConverterImpl.java	23
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/utils/ValuePair.java	21
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/vinci/DATACasUtils.java	324
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/vinci/Vinci.java	100
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/cpm/vinci/cas_data/VinciPrimitiveValue.java	28
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/CpeDefaultValues.java	23
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorConfigurationParameterSettingsImpl.java	54
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorCpeObject.java	453
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorDeploymentParamImpl.java	65
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorDeploymentParamsImpl.java	95
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorErrorHandlingImpl.java	49
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorErrorRateThresholdImpl.java	95
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorExecArgImpl.java	59
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorExecArgsImpl.java	34
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorExecutableImpl.java	144
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorFilterImpl.java	58
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorMaxRestartsImpl.java	79
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorRunInSeperateProcessImpl.java	33
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorRuntimeEnvParamImpl.java	66
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CasProcessorTimeoutImpl.java	61
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeCasProcessorsImpl.java	256
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeCheckpointImpl.java	111
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeCollectionReaderCasInitializerImpl.java	89
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeCollectionReaderImpl.java	62
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeCollectionReaderIteratorImpl.java	86
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeComponentDescriptorImpl.java	71
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeConfigurationImpl.java	116
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeDescriptionImpl.java	262
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeDescriptorFactory.java	264
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeIncludeImpl.java	47
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeIntegratedCasProcessorImpl.java	26
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeLocalCasProcessorImpl.java	209
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeObject.java	13
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeRemoteCasProcessorImpl.java	27
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeResourceManagerConfigurationImpl.java	51
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeSofaMappingImpl.java	61
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeSofaMappingsImpl.java	76
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/CpeTimerImpl.java	19
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/NameValuePairImpl.java	28
uimaj-cpe/src/main/java/org/apache/uima/collection/impl/metadata/cpe/OutputQueue_impl.java	54
uimaj-cpe/src/main/resources/org/apache/uima/collection/impl/cpm/container/defaultCpeDescriptor.xml	37
uimaj-document-annotation/src/main/java/org/apache/uima/jcas/tcas/DocumentAnnotation.java	36
uimaj-eclipse-feature-runtime/feature.xml	106
uimaj-eclipse-feature-runtime/uima-eclipse-user-agreement.html	107
uimaj-eclipse-feature-tools/feature.xml	169
uimaj-eclipse-feature-tools/uima-eclipse-user-agreement.html	107
uimaj-eclipse-update-site/category.xml	14
uimaj-ep-cas-editor-ide/plugin.xml	81
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorIdePlugin.java	93
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorIdePreferenceConstants.java	7
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorIdePreferenceInitializer.java	16
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorIdePreferencePage.java	22
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorPerspectiveFactory.java	38
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/CasEditorPreferencePage.java	16
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/DefaultCasDocumentProvider.java	391
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/NlpProject.java	21
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/TypeSystemLocationPropertyPage.java	146
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/WorkspaceResourceDialog.java	51
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/searchstrategy/ITypeSystemSearchStrategy.java	5
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/searchstrategy/TypeSystemSearchStrategyFactory.java	42
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/ContainerElementFilter.java	17
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/DocumentImportStructureProvider.java	144
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/ImportDocumentWizard.java	78
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/ImportDocumentWizardPage.java	332
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/OverwriteQuery.java	34
uimaj-ep-cas-editor-ide/src/main/java/org/apache/uima/caseditor/ide/wizards/package-info.java	1
uimaj-ep-cas-editor-ide/src/main/resources/org/apache/uima/caseditor/ide/wizards/ts.xml	9
uimaj-ep-cas-editor/plugin.xml	153
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/CasEditorPlugin.java	71
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/Images.java	19
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/core/TaeError.java	10
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/core/model/DefaultColors.java	59
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/core/model/dotcorpus/DotCorpus.java	120
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/core/model/dotcorpus/DotCorpusSerializer.java	184
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AbstractAnnotationDocumentListener.java	40
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AbstractDocument.java	113
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AbstractDocumentListener.java	33
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationDocument.java	130
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditor.java	1091
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorActionContributor.java	30
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorPreferenceConstants.java	7
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorPreferenceInitializer.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorPreferencePage.java	52
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorSelection.java	58
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationEditorView.java	48
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationInformationProvider.java	34
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationSelectionListener.java	13
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationStyle.java	159
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/AnnotationStyleChangeListener.java	17
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ArrayValue.java	115
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CasDocumentProvider.java	61
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CasDocumentProviderFactory.java	64
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CasEditorError.java	10
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CasEditorView.java	132
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CasEditorViewPage.java	129
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ChangeModeAction.java	21
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/CustomInformationControl.java	106
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/DocumentUimaImpl.java	234
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FeatureStructureSelection.java	39
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FeatureStructureSelectionIterator.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FeatureStructureSelectionProvider.java	54
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FeatureValue.java	60
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FindAnnotateAction.java	18
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/FindAnnotateDialog.java	277
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/IAnnotationEditorModifyListener.java	7
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/IAnnotationStyleListener.java	5
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ICasDocument.java	22
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ICasDocumentListener.java	13
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ICasEditor.java	10
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ICasEditorInputListener.java	6
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ICustomInformationControlContentHandler.java	4
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/IEditorSelectionListener.java	4
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/ModelFeatureStructure.java	66
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/QuickTypeSelectionDialog.java	244
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/SubPageSite.java	61
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/TextDocumentProvider.java	92
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/DeleteFeatureStructureAction.java	24
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/LowerLeftAnnotationSideAction.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/LowerRightAnnotationSideAction.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/MergeAnnotationAction.java	31
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/WideLeftAnnotationSideAction.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/action/WideRightAnnotationSideAction.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/BackgroundDrawingStrategy.java	72
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/BoxDrawingStrategy.java	33
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/BracketDrawingStrategy.java	42
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/DrawingStyle.java	29
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/EclipseAnnotationPeer.java	32
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/TagDrawingStrategy.java	99
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/TextColorDrawingStrategy.java	25
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/TokenDrawingStrategy.java	47
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/annotation/UnderlineDrawingStrategy.java	28
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/context/AnnotationEditingControl.java	17
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/context/AnnotationEditingControlCreator.java	26
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/contextmenu/IModeMenuListener.java	5
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/contextmenu/IShowAnnotationsListener.java	6
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/contextmenu/ModeMenu.java	41
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/contextmenu/ShowAnnotationsMenu.java	95
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/contextmenu/TypeMenu.java	42
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/CreateFeatureStructureDialog.java	149
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/EditView.java	21
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/EditViewPage.java	536
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/FeatureColumnLabelProvider.java	21
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/FeatureStructureContentProvider.java	174
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/ValueColumnLabelProvider.java	45
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/ByteCellEditorValidator.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/CellEditorValidatorFacotory.java	22
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/FloatCellEditorValidator.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/IntegerCellEditorValidator.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/LongCellEditorValidator.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/editview/validator/ShortCellEditorValidator.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/FeatureStructureBrowserView.java	20
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/FeatureStructureBrowserViewPage.java	367
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/FeatureStructureLabelProvider.java	53
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/ITypePaneListener.java	5
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/TypeCombo.java	65
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/fsview/package-info.java	1
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/AnnotationOutline.java	259
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/AnnotationTreeNode.java	59
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/AnnotationTreeNodeList.java	51
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/AnnotationTypeTreeNode.java	50
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/ModeSensitiveContentProvider.java	89
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/OutlineContentProviderBase.java	56
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/OutlineLabelProvider.java	46
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/OutlinePageBook.java	42
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/OutlineStyles.java	5
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/OutlineTableSorter.java	22
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/SwitchStyleAction.java	23
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/TypeGroupedContentProvider.java	113
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/outline/package-info.java	1
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/package-info.java	1
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/styleview/AnnotationStyleView.java	19
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/styleview/AnnotationStyleViewPage.java	265
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/styleview/AnnotationTypeNode.java	37
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/AnnotationComparator.java	11
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/AnnotationSelection.java	54
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/ContainingConstraint.java	31
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/FeatureStructureTransfer.java	13
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/IDGenerator.java	27
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/ObjectTransfer.java	36
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/Primitives.java	83
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/Span.java	56
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/StrictTypeConstraint.java	16
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/editor/util/UimaUtil.java	14
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/ui/package-info.java	1
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/ui/property/AnnotationPropertyPage.java	344
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/ui/property/EditorAnnotationPropertyPage.java	29
uimaj-ep-cas-editor/src/main/java/org/apache/uima/caseditor/ui/property/package-info.java	1
uimaj-ep-cas-editor/src/main/resources/org/apache/uima/caseditor/ui/action/CorporaCollectionReader.xml	11
uimaj-ep-cas-editor/src/main/resources/org/apache/uima/caseditor/ui/action/DummyTAE.xml	21
uimaj-ep-cas-editor/src/main/resources/org/apache/uima/caseditor/ui/action/Index.xml	6
uimaj-ep-configurator/plugin.xml	121
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/CDEpropertyPage.java	126
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/InternalErrorCDE.java	15
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/Messages.java	20
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/PreferencePage.java	47
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/StandardStrings.java	16
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/TAEConfiguratorPlugin.java	102
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/Form2Panel.java	12
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/MultiPageEditor.java	2309
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/MultiPageEditorContributor.java	216
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/point/IUimaEditorExtension.java	12
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/point/IUimaMultiPageEditor.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/AbstractImportablePartSection.java	108
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/AbstractSection.java	1303
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/AbstractSectionParm.java	551
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/AggregatePage.java	25
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/AggregateSection.java	559
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/CapabilityPage.java	27
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/CapabilitySection.java	823
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ExtnlResBindSection.java	294
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/FileAndShortName.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/FlowSection.java	476
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/GeneralSection.java	184
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/HeaderPage.java	204
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/HeaderPageWithSash.java	52
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ImportResBindSection.java	69
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ImportSection.java	299
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/IndexImportSection.java	62
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/IndexSection.java	350
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/IndexesPage.java	41
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/MetaDataSection.java	62
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/OverviewPage.java	37
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ParameterDelegatesSection.java	342
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ParameterPage.java	26
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ParameterSection.java	770
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ParameterSettingsSection.java	84
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/PrimitiveSection.java	157
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/PriorityListSection.java	208
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ResourceDependencySection.java	264
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ResourcesPage.java	31
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/SettingsPage.java	26
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/SofaMapSection.java	378
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/TypeImportSection.java	86
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/TypePage.java	25
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/TypePriorityImportSection.java	59
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/TypeSection.java	1215
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/Utility.java	137
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/ValueSection.java	331
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AbstractDialog.java	362
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AbstractDialogKeyVerify.java	40
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AbstractDialogKeyVerifyJavaNames.java	65
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AbstractDialogMultiColTable.java	101
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddAllowedValueDialog.java	49
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddCapabilityFeatureDialog.java	128
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddCapabilityTypeDialog.java	177
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddExternalResourceDependencyDialog.java	74
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddExternalResourceDialog.java	110
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddFeatureDialog.java	174
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddIndexDialog.java	229
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddIndexKeyDialog.java	128
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddParameterDialog.java	104
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddRemoteServiceDialog.java	290
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddSofaDialog.java	153
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddTypeDialog.java	135
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/AddTypeToPriorityListDialog.java	69
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/CommonInputDialog.java	95
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/ContentAssistField32.java	19
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/EditSofaBindingsDialog.java	59
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/ExportImportablePartDialog.java	104
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/FindComponentDialog.java	147
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/PickTaeForTypesDialog.java	182
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/ResourcePickerDialog.java	133
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/SearchMonitoringThread.java	32
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/SearchThread.java	190
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/SelectTypeDialog.java	110
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/TypesWithNameSpaces.java	21
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/ui/dialogs/TypesWithNameSpaces32.java	95
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/ColorManager.java	23
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/IXMLColorConstants.java	9
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/NonRuleBasedDamagerRepairer.java	70
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/TagRule.java	27
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLConfiguration.java	75
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLDocumentProvider.java	19
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLDoubleClickStrategy.java	90
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLEditor.java	142
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLPartitionScanner.java	19
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLScanner.java	18
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLTagScanner.java	18
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/editors/xml/XMLWhitespaceDetector.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/files/ContextForPartDialog.java	100
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/files/MultiResourceSelectionDialog.java	319
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/files/MultiResourceSelectionDialogWithFlowOption.java	46
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/files/PickOverrideKeysAndParmName.java	148
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/AbstractModelPart.java	20
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/AllTypes.java	39
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/BuiltInTypes.java	67
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/ConfigGroup.java	86
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/DefinedTypesWithSupers.java	42
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/DescriptorMetaData.java	117
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/DescriptorTCAS.java	52
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/model/FlowNodes.java	32
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/AbstractNewWizard.java	172
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/AbstractNewWizardPage.java	141
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CasConsumerNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CasConsumerNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CasInitializerNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CasInitializerNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CollectionReaderNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/CollectionReaderNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/FlowControllerNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/FlowControllerNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/FsIndexCollectionNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/FsIndexCollectionNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/ResourceManagerConfigurationNewWizard.java	23
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/ResourceManagerConfigurationNewWizardPage.java	10
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TAEConfiguratorNewWizard.java	22
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TAEConfiguratorNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TypePrioritiesNewWizard.java	21
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TypePrioritiesNewWizardPage.java	8
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TypeSystemNewWizard.java	21
uimaj-ep-configurator/src/main/java/org/apache/uima/taeconfigurator/wizards/TypeSystemNewWizardPage.java	8
uimaj-ep-debug/plugin.xml	94
uimaj-ep-debug/src/main/java/org/apache/uima/ep_debug/DebugPlugin.java	17
uimaj-ep-debug/src/main/java/org/apache/uima/ep_debug/DebugPluginStartup.java	23
uimaj-ep-jcasgen/plugin.xml	13
uimaj-ep-jcasgen/src/main/java/org/apache/uima/jcas/jcasgenp/EP_LogThrowErrorImpl.java	17
uimaj-ep-jcasgen/src/main/java/org/apache/uima/jcas/jcasgenp/JgPlugin.java	20
uimaj-ep-jcasgen/src/main/java/org/apache/uima/jcas/jcasgenp/JgPluginRunner.java	37
uimaj-ep-jcasgen/src/main/java/org/apache/uima/jcas/jcasgenp/MergerImpl.java	49
uimaj-ep-jcasgen/src/main/java/org/apache/uima/jcas/jcasgenp/ProgressMonitorImpl.java	33
uimaj-ep-launcher/plugin.xml	19
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/AnalysisEngineLaunchConfigurationDelegate.java	135
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/LauncherConstants.java	14
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/LauncherPlugin.java	47
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/RemoteLauncher.java	226
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/ui/AnalysisEngineMainTab.java	455
uimaj-ep-launcher/src/main/java/org/apache/uima/ep_launcher/ui/AnalysisEngineTabGroup.java	20
uimaj-ep-pear-packager/about.html	34
uimaj-ep-pear-packager/plugin.xml	68
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/PearException.java	68
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/PearPlugin.java	27
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/actions/AddUimaNatureAction.java	79
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/actions/EditInstallationDescriptorAction.java	42
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/actions/GeneratePearFileAction.java	76
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/actions/PearProjectCustomizationException.java	69
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/GeneratePearWizard.java	151
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/PearExport.java	18
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/PearExportMessages.java	20
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/PearExportOperation.java	115
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/PearFileResourceExportPage.java	249
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/generate/package-info.java	1
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/EditInstallationDescriptorWizard.java	124
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/INSDComponentPage.java	237
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/INSDEnvironmentPage.java	312
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/InsdConstants.java	14
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/PearInstallationDescriptor.java	57
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/package-info.java	1
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/AbstractVarValViewerHandler.java	161
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/IVarValListViewer.java	6
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarVal.java	27
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarValCellModifier.java	52
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarValLabelProvider.java	26
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarValList.java	69
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarValSorter.java	27
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/VarValViewerHandler.java	54
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/insd/edit/vars/package-info.java	1
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/nature/ProjectCustomizer.java	114
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/nature/UimaNature.java	32
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/nature/package-info.java	1
uimaj-ep-pear-packager/src/main/java/org/apache/uima/pear/package-info.java	1
uimaj-ep-runtime/plugin.xml	4
uimaj-examples/src/main/data/xml/IBM_LifeSciences.xml	14
uimaj-examples/src/main/data/xml/New_IBM_Fellows.xml	17
uimaj-examples/src/main/data/xml/SeminarChallengesInSpeechRecognition.xml	36
uimaj-examples/src/main/data/xml/UIMASummerSchool2003.xml	58
uimaj-examples/src/main/data/xml/UIMA_Seminars.xml	18
uimaj-examples/src/main/data/xml/WatsonConferenceRooms.xml	45
uimaj-examples/src/main/deploy/vinci/Deploy_MeetingDetectorTAE.xml	7
uimaj-examples/src/main/deploy/vinci/Deploy_PersonTitleAnnotator.xml	7
uimaj-examples/src/main/deploy/vinci/Deploy_XmiWriterWithTutorialTypeSystem.xml	7
uimaj-examples/src/main/descriptors/MixedAggregate.xml	40
uimaj-examples/src/main/descriptors/analysis_engine/GovernmentOfficialRecognizer_RegEx_TAE.xml	119
uimaj-examples/src/main/descriptors/analysis_engine/NamesAndGovernmentOfficials_TAE.xml	52
uimaj-examples/src/main/descriptors/analysis_engine/NamesAndPersonTitles_TAE.xml	50
uimaj-examples/src/main/descriptors/analysis_engine/PersonTitleAnnotator.xml	143
uimaj-examples/src/main/descriptors/analysis_engine/PersonTitleAnnotator_WithinNamesOnly.xml	153
uimaj-examples/src/main/descriptors/analysis_engine/RegExAnnotator.xml	101
uimaj-examples/src/main/descriptors/analysis_engine/SimpleEmailRecognizer_RegEx_TAE.xml	88
uimaj-examples/src/main/descriptors/analysis_engine/SimpleNameRecognizer_RegEx_TAE.xml	88
uimaj-examples/src/main/descriptors/analysis_engine/SimpleTokenAndSentenceAnnotator.xml	45
uimaj-examples/src/main/descriptors/analysis_engine/SofaExampleAnnotator.xml	52
uimaj-examples/src/main/descriptors/analysis_engine/UIMA_Analysis_Example.xml	57
uimaj-examples/src/main/descriptors/analysis_engine/XmlDetagger.xml	49
uimaj-examples/src/main/descriptors/cas_consumer/AnnotationPrinter.xml	46
uimaj-examples/src/main/descriptors/cas_consumer/InlineXmlCasConsumer.xml	45
uimaj-examples/src/main/descriptors/cas_consumer/XCasWriterCasConsumer.xml	45
uimaj-examples/src/main/descriptors/cas_consumer/XmiEcoreCasConsumer.xml	66
uimaj-examples/src/main/descriptors/cas_consumer/XmiWriterCasConsumer.xml	47
uimaj-examples/src/main/descriptors/cas_consumer/XmiWriterWithTutorialTypeSystem.xml	50
uimaj-examples/src/main/descriptors/cas_multiplier/Segment_Annotate_Merge_AE.xml	110
uimaj-examples/src/main/descriptors/cas_multiplier/SegmenterAndTokenizerAE.xml	41
uimaj-examples/src/main/descriptors/cas_multiplier/SimpleTextMerger.xml	55
uimaj-examples/src/main/descriptors/cas_multiplier/SimpleTextSegmenter.xml	47
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_Integrated.xml	57
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_Managed_Unix.xml	66
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_Managed_Windows.xml	66
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_NonManaged.xml	60
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_NonManagedCasConsumer.xml	60
uimaj-examples/src/main/descriptors/collection_processing_engine/MeetingFinderCPE_WithXmlDetagging.xml	92
uimaj-examples/src/main/descriptors/collection_reader/FileSystemCollectionReader.xml	88
uimaj-examples/src/main/descriptors/collection_reader/XmiCollectionReader.xml	46
uimaj-examples/src/main/descriptors/flow_controller/AdvancedFixedFlowController.xml	60
uimaj-examples/src/main/descriptors/flow_controller/MeetingDetectorTAE_AdvancedFixedFlow.xml	86
uimaj-examples/src/main/descriptors/flow_controller/MeetingDetectorTAE_Whiteboard.xml	47
uimaj-examples/src/main/descriptors/flow_controller/WhiteboardFlowController.xml	27
uimaj-examples/src/main/descriptors/tutorial/ex1/RoomNumberAnnotator.xml	32
uimaj-examples/src/main/descriptors/tutorial/ex1/TutorialTypeSystem.xml	21
uimaj-examples/src/main/descriptors/tutorial/ex2/RoomNumberAnnotator.xml	73
uimaj-examples/src/main/descriptors/tutorial/ex3/RoomNumberAndDateTime.xml	44
uimaj-examples/src/main/descriptors/tutorial/ex3/TutorialDateTime.xml	40
uimaj-examples/src/main/descriptors/tutorial/ex3/TutorialTypeSystem.xml	45
uimaj-examples/src/main/descriptors/tutorial/ex4/MeetingAnnotator.xml	61
uimaj-examples/src/main/descriptors/tutorial/ex4/MeetingDetectorTAE.xml	51
uimaj-examples/src/main/descriptors/tutorial/ex4/TutorialTypeSystem.xml	82
uimaj-examples/src/main/descriptors/tutorial/ex5/RoomNumberAnnotator.xml	73
uimaj-examples/src/main/descriptors/tutorial/ex6/TutorialTypeSystem.xml	99
uimaj-examples/src/main/descriptors/tutorial/ex6/UimaAcronymAnnotator.xml	59
uimaj-examples/src/main/descriptors/tutorial/ex6/UimaMeetingAnnotator.xml	45
uimaj-examples/src/main/descriptors/tutorial/ex6/UimaMeetingDetectorTAE.xml	75
uimaj-examples/src/main/descriptors/tutorial/search/MeetingIndexBuildSpec.xml	45
uimaj-examples/src/main/descriptors/vinciService/MeetingDetectorVinciService.xml	6
uimaj-examples/src/main/descriptors/vinciService/PersonTitleVinciService.xml	6
uimaj-examples/src/main/descriptors/vinciService/XmiWriterVinciServiceWithTutorialTypeSystem.xml	6
uimaj-examples/src/main/java/example/PersonTitle.java	46
uimaj-examples/src/main/java/org/apache/uima/tutorial/DateAnnot.java	33
uimaj-examples/src/main/java/org/apache/uima/tutorial/DateTimeAnnot.java	47
uimaj-examples/src/main/java/org/apache/uima/tutorial/Meeting.java	88
uimaj-examples/src/main/java/org/apache/uima/tutorial/RoomNumber.java	47
uimaj-examples/src/main/java/org/apache/uima/tutorial/SentenceAnnot.java	32
uimaj-examples/src/main/java/org/apache/uima/tutorial/TimeAnnot.java	33
uimaj-examples/src/main/java/org/apache/uima/tutorial/UimaAcronym.java	51
uimaj-examples/src/main/java/org/apache/uima/tutorial/UimaMeeting.java	37
uimaj-examples/src/main/java/org/apache/uima/tutorial/WordAnnot.java	32
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex1/RoomNumberAnnotator.java	26
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex2/RoomNumberAnnotator.java	38
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex3/TutorialDateTime.java	132
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex4/MeetingAnnotator.java	46
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex5/RoomNumberAnnotator.java	44
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex6/StringMapResource.java	4
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex6/StringMapResource_impl.java	32
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex6/UimaAcronymAnnotator.java	36
uimaj-examples/src/main/java/org/apache/uima/tutorial/ex6/UimaMeetingAnnotator.java	64
uimaj-examples/src/main/run_configuration/UIMA Annotation Viewer.launch	14
uimaj-examples/src/main/run_configuration/UIMA CAS Visual Debugger.launch	20
uimaj-examples/src/main/run_configuration/UIMA CPE GUI.launch	14
uimaj-examples/src/main/run_configuration/UIMA Document Analyzer.launch	20
uimaj-examples/src/main/run_configuration/UIMA JCasGen Merge.launch	15
uimaj-examples/src/main/run_configuration/UIMA JCasGen.launch	15
uimaj-examples/src/main/run_configuration/UIMA PEAR Installer.launch	20
uimaj-examples/src/main/run_configuration/UIMA Run AE.launch	21
uimaj-examples/src/main/run_configuration/UIMA Run CPE.launch	21
uimaj-examples/src/main/run_configuration/UIMA Run V3 migrate JCas from classes roots.launch	9
uimaj-examples/src/main/run_configuration/UIMA Run V3 migrate JCas from sources roots.launch	9
uimaj-examples/src/main/run_configuration/UIMA Start VNS.launch	14
uimaj-examples/src/main/run_configuration/UIMA Start Vinci Service.launch	21
uimaj-it-pear-with-typesystem/src/main/java/org/apache/uima/it/pear_with_typesystem/Scenario1TestAnnotator.java	20
uimaj-it-pear-with-typesystem/src/main/java/org/apache/uima/it/pear_with_typesystem/Scenario2TestAnnotator.java	27
uimaj-it-pear-with-typesystem/src/main/java/org/apache/uima/it/pear_with_typesystem/Scenario3TestAnnotator.java	19
uimaj-it-pear-with-typesystem/src/main/java/org/apache/uima/it/pear_with_typesystem/TestAnnotator_ImplBase.java	79
uimaj-it-pear-with-typesystem/src/main/java/org/apache/uima/it/pear_with_typesystem/spi/JCasClassProviderForTesting.java	18
uimaj-it-pear-with-typesystem/src/main/resources/org/apache/uima/it/pear_with_typesystem/TestAnnotator.xml	30
uimaj-it-pear-with-typesystem/src/main/resources/org/apache/uima/it/pear_with_typesystem/type/typeSystemDescriptor.xml	31
uimaj-jet-expander/JetExpander.launch	15
uimaj-jet-expander/JetExpander_Type.launch	15
uimaj-jet-expander/src/org/apache/uima/util/jet/JetExpander.java	212
uimaj-json/src/main/java/org/apache/uima/json/JsonCasSerializer.java	907
uimaj-json/src/main/java/org/apache/uima/json/JsonMetaDataSerializer.java	78
uimaj-json/src/main/java/org/apache/uima/json/impl/JsonContentHandlerJacksonWrapper.java	242
uimaj-json/src/main/java/org/apache/uima/json/impl/MetaDataObjectSerializer_json.java	178
uimaj-tools/src/main/java/org/apache/uima/tools/AnnotationFeaturesViewer.java	103
uimaj-tools/src/main/java/org/apache/uima/tools/AnnotationViewerMain.java	295
uimaj-tools/src/main/java/org/apache/uima/tools/RunAE.java	282
uimaj-tools/src/main/java/org/apache/uima/tools/ValidateDescriptor.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/annot_view/Gladis.java	8
uimaj-tools/src/main/java/org/apache/uima/tools/components/FileSystemCollectionReader.java	136
uimaj-tools/src/main/java/org/apache/uima/tools/components/InlineXmlCasConsumer.java	117
uimaj-tools/src/main/java/org/apache/uima/tools/components/XCasWriterCasConsumer.java	89
uimaj-tools/src/main/java/org/apache/uima/tools/components/XmiWriterCasConsumer.java	92
uimaj-tools/src/main/java/org/apache/uima/tools/components/XmlDetagger.java	100
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/AnalysisEnginePanel.java	47
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/ConfigField.java	128
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/ConsumerPanel.java	44
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/CpmFrame.java	133
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/CpmPanel.java	1415
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/ElapsedTimeFormatter.java	28
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/JTabbedPaneWithCloseIcons.java	102
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/MetaDataPanel.java	141
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/PerformanceReportDialog.java	89
uimaj-tools/src/main/java/org/apache/uima/tools/cpm/TabClosedListener.java	4
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/AnnotationDisplayCustomizationFrame.java	261
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/AnnotationExtent.java	24
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/ArrayNode.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/AutoFoldingMenu.java	29
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/CVD.java	133
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/ColorIcon.java	31
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/FSNode.java	340
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/FSTreeModel.java	199
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/FSTreeNode.java	25
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/IndexTreeNode.java	35
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/LogFileViewer.java	102
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/MainFrame.java	1778
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/MarkupExtent.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/MultiAnnotViewerFrame.java	138
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/MultiMarkup.java	149
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/RecentFilesList.java	51
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/StringFsPopupEventAdapter.java	60
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/TypeTreeNode.java	27
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AboutHandler.java	37
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AboutUimaHandler.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AddLanguageHandler.java	18
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AnnotatorOpenEventHandler.java	29
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AnnotatorRerunEventHandler.java	14
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AnnotatorRunCPCEventHandler.java	14
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/AnnotatorRunOnCasEventHandler.java	14
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/CaretChangeHandler.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/CloseAnnotationViewHandler.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/CloseLogViewHandler.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/CloseTypeSystemHandler.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ColorPrefsOpenHandler.java	35
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ColorPrefsSaveHandler.java	31
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FSTreeSelectionListener.java	33
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FileOpenEventHandler.java	38
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FileSaveAsEventHandler.java	41
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FileSaveEventHandler.java	15
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FocusFSAction.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FocusIRAction.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/FocusTextAction.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/HelpHandler.java	18
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/IndexPopupListener.java	61
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/IndexTreeSelectionListener.java	45
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/LoadRecentDescFileEventHandler.java	17
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/LoadRecentTextFileEventHandler.java	17
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/MainFrameClosing.java	29
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ManualHandler.java	89
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/NewTextEventHandler.java	24
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/PopupHandler.java	21
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/PopupListener.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/RemoveLanguageHandler.java	20
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/RestoreLangDefaultsHandler.java	17
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SetCodePageHandler.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SetDataPathHandler.java	19
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SetLanguageHandler.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SetLogConfigHandler.java	21
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ShowAnnotatedTextHandler.java	28
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ShowAnnotationCustomizerHandler.java	19
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/ShowTypesystemHandler.java	26
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SofaSelectionListener.java	34
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/SystemExitHandler.java	17
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/TextChangedListener.java	28
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/TextContextMenuAction.java	21
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/TextFocusHandler.java	17
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/TreeFocusHandler.java	22
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/TypeSystemFileOpenEventHandler.java	54
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/UndoMgr.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/XCASFileOpenEventHandler.java	52
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/XCASSaveHandler.java	46
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/XCASSaveTSHandler.java	43
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/XmiCasFileOpenHandler.java	31
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/control/XmiCasSaveHandler.java	51
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/tsview/FeatureTableModel.java	62
uimaj-tools/src/main/java/org/apache/uima/tools/cvd/tsview/MainFrame.java	161
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/AnnotationViewerDialog.java	544
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/DocumentAnalyzer.java	896
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/FileSelector.java	193
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/FileSelectorListener.java	5
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/PrefsMediator.java	193
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/TfDocumentListener.java	20
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/TfFileSelectorListener.java	13
uimaj-tools/src/main/java/org/apache/uima/tools/docanalyzer/TfFocusListener.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/images/Images.java	27
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/GUI.java	272
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/GuiErrorImpl.java	27
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/GuiProgressMonitor.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/IError.java	7
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/IMerge.java	8
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/IProgressMonitor.java	7
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/JCasTypeTemplate.java	189
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/Jg.java	914
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/LogThrowErrorImpl.java	15
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/Prefs.java	21
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/TypeInfo.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/UimaLoggerProgressMonitor.java	28
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/Waiter.java	23
uimaj-tools/src/main/java/org/apache/uima/tools/jcasgen/package-info.java	1
uimaj-tools/src/main/java/org/apache/uima/tools/pear/install/InstallPear.java	665
uimaj-tools/src/main/java/org/apache/uima/tools/pear/install/InstallPearCli.java	62
uimaj-tools/src/main/java/org/apache/uima/tools/pear/merger/PMController.java	265
uimaj-tools/src/main/java/org/apache/uima/tools/pear/merger/PMControllerHelper.java	109
uimaj-tools/src/main/java/org/apache/uima/tools/pear/merger/PMUimaAgent.java	226
uimaj-tools/src/main/java/org/apache/uima/tools/pear/packager/PearPackager.java	115
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/AnTreeListener.java	13
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/AnnotationFeaturesViewer.java	141
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/ColorEditor.java	37
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/ColorParser.java	135
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/ColorRenderer.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/LabelCellEditor.java	19
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/MyCellRenderer.java	27
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleConstants.java	12
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleMapEditor.java	470
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleMapEntry.java	70
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleMapTable.java	25
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleMapTableModel.java	94
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/StyleMapXmlParser.java	73
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/TableDropAdapter.java	26
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/TableGUIMediator.java	50
uimaj-tools/src/main/java/org/apache/uima/tools/stylemap/TableSelectionListener.java	13
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/AboutDialog.java	61
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/Caption.java	10
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/FileChooserBugWorkarounds.java	43
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/FileSelector.java	199
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/FileSelectorListener.java	5
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/FormPanel.java	71
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/ImageButton.java	14
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/IntegerField.java	16
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/ListSelector.java	158
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/SliderField.java	66
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/SpringUtilities.java	106
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/TransportControlListener.java	7
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/TransportControlPanel.java	132
uimaj-tools/src/main/java/org/apache/uima/tools/util/gui/XMLFileFilter.java	30
uimaj-tools/src/main/java/org/apache/uima/tools/util/htmlview/AnnotationViewGenerator.java	202
uimaj-tools/src/main/java/org/apache/uima/tools/viewer/CasAnnotationViewer.java	1877
uimaj-tools/src/main/java/org/apache/uima/tools/viewer/CasTreeViewer.java	287
uimaj-tools/src/main/java/org/apache/uima/tools/viewer/EntityResolver.java	8
uimaj-tools/src/main/resources/org/apache/uima/tools/components/FileSystemCollectionReader.xml	84
uimaj-tools/src/main/resources/org/apache/uima/tools/components/InlineXmlCasConsumer.xml	56
uimaj-tools/src/main/resources/org/apache/uima/tools/components/XCasWriterCasConsumer.xml	40
uimaj-tools/src/main/resources/org/apache/uima/tools/components/XmiWriterCasConsumer.xml	47
uimaj-tools/src/main/resources/org/apache/uima/tools/components/XmlDetagger.xml	49
uimaj-tools/src/main/resources/org/apache/uima/tools/jcasgen/jMergeCtl.xml	101
uimaj-tools/src/main/resources/org/apache/uima/tools/pear/install/piHelp.html	63
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/annotationViewer.js	68
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/annotations.xsl	27
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/index.html	12
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/styleMapToCss.xsl	9
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/styleMapToDocFrameXsl.xsl	22
uimaj-tools/src/main/resources/org/apache/uima/tools/util/htmlview/styleMapToLegend.xsl	49
uimaj-tools/src/main/resources/org/apache/uima/tools/viewer/CasAnnotationViewerApplet.html	11
uimaj-tools/src/main/resources/org/apache/uima/tools/viewer/CasTreeViewerApplet.html	10
uimaj-v3migration-jcas/src/main/java/org/apache/uima/migratev3/jcas/MigrateJCas.java	1820
uimaj-v3migration-jcas/src/main/java/org/apache/uima/migratev3/jcas/UimaDecompiler.java	136
unused-saved/src/org/apache/uima/cas/impl/AnnotationIndexImpl.java	111
unused-saved/src/org/apache/uima/cas/impl/FSIteratorWrapperDoubleCheck.java	84
unused-saved/src/org/apache/uima/cas/impl/FSListIteratorImpl.java	70
unused-saved/src/org/apache/uima/cas/impl/FSRBTIndex.java	1
unused-saved/src/org/apache/uima/cas/impl/FeatureArrayImpl.java	25
unused-saved/src/org/apache/uima/cas/impl/FeatureGetter_int.java	5
unused-saved/src/org/apache/uima/cas/impl/FeatureGetter_ref.java	5
unused-saved/src/org/apache/uima/cas/impl/FeatureSetter_int.java	5
unused-saved/src/org/apache/uima/cas/impl/FeatureSetter_ref.java	5
unused-saved/src/org/apache/uima/cas/impl/FeatureStructureClassGen.java	345
unused-saved/src/org/apache/uima/cas/impl/FsIndex_aggr.java	131
unused-saved/src/org/apache/uima/cas/impl/FsIterator_set_sorted.java	154
unused-saved/src/org/apache/uima/cas/impl/FsIterator_set_sorted_navset_version.java	171
unused-saved/src/org/apache/uima/cas/impl/FsIterator_subtypes.java	28
unused-saved/src/org/apache/uima/cas/impl/FsIterator_subtypes_list_unused.java	9
unused-saved/src/org/apache/uima/cas/impl/JCasCoverClassFactoryTest.java	33
unused-saved/src/org/apache/uima/cas/impl/TypeImplList.java	12
unused-saved/src/org/apache/uima/cas/impl/TypeImplMap.java	17
unused-saved/src/org/apache/uima/cas/impl/XXXdont_use_JCasCoverClassFactory.java	353
unused-saved/src/org/apache/uima/fs_generation/impl/JCasCoverClassFactoryTest.java	18
unused-saved/src/org/apache/uima/internal/util/ComparableIntPointerIterator.java	5
unused-saved/src/org/apache/uima/internal/util/Int2IntHashMap.java	331
unused-saved/src/org/apache/uima/internal/util/Int2IntHashMapTest.java	58
unused-saved/src/org/apache/uima/internal/util/Int2IntPerfTest.java	82
unused-saved/src/org/apache/uima/internal/util/UIMATypeSystemClassLoader.java	65
unused-saved/src/org/apache/uima/internal/util/UIMATypeSystemClassLoaderInjector.java	46
unused-saved/src/org/apache/uima/jcas/cas/JavaObjectArray.java	85
unused-saved/src/org/apache/uima/jcas/impl/CASMetadata.java	7
unused-saved/src/org/apache/uima/jcas/impl/JCasCoverClassFactory.java	219
unused-saved/src/org/apache/uima/jcas/impl/JCasCoverClassFactoryTest.java	32
unused-saved/src/org/apache/uima/jcas/impl/JCasHashMap.java	178
unused-saved/src/org/apache/uima/jcas/impl/JCasHashMapCompareTest.java	122
unused-saved/src/org/apache/uima/jcas/impl/JCasHashMapSubMap.java	267
unused-saved/src/org/apache/uima/jcas/impl/JCasHashMapTest.java	318
unused-saved/src/org/apache/uima/jcasgen/JCasClassDefinition.java	12
unused-saved/src/org/apache/uima/jcasgen/impl/JCasClassConversion.java	151
unused-saved/src/org/apache/uima/jcasgen/impl/package.html	12
unused-saved/src/org/apache/uima/jcasgen/package.html	14
unused-saved/src/org/apache/uima/tools/jcas/internal/AnalyzeContent.java	214
unused-saved/src/org/apache/uima/tools/jcasgen/DecompiledFilter.java	50
unused-saved/src/study/asm/decompiled/AnnotationDumpV3.java	258