app/controllers/GroupController.php (11 lines):
	- line 18: // TODO: Get the group name and description
	- line 19: // TODO: Create the new group
	- line 20: // TODO: Get users to add
	- line 21: // TODO: Update membership of users in list
	- line 33: // TODO: Get users to edit
	- line 34: // TODO: Update membership of users in list
	- line 39: // TODO: Determine if the user is a member of the group
	- line 40: // TODO: Determine if the user is owner of the group
	- line 41: // TODO: If not a member, load a page that says they cannot see the group
	- line 42: // TODO: If a standard member, display group name, description, members, projects(?) and experiments (?)
	- line 43: // TODO: If owner, display buttons to allow adding and removing members


public/js/datacat/GLmol.js (11 lines):
	- line 230: if (altLoc != ' ' && altLoc != 'A') continue; // FIXME: ad hoc
	- line 311: // TODO: Implement me!
	- line 525: // TODO: Find inner side of a ring
	- line 650: // FIXME: Winkled...
	- line 868: // FIXME: transition!
	- line 1089: if (atom.atom == 'O3\'') { // to connect 3' end. FIXME: better way to do?
	- line 1113: O.normalize().multiplyScalar(nucleicAcidWidth);  // TODO: refactor
	- line 1201: // TODO: Test
	- line 1398: // TODO: Add near(atomlist, neighbor, distanceCutoff)
	- line 1399: // TODO: Add expandToResidue(atomlist)
	- line 1605: // TODO: Better touch panel support.


public/js/moment.js (5 lines):
	- line 538: // TODO: remove 'name' arg after deprecation is removed
	- line 1324: // TODO: We need to take the current isoWeekYear, but that depends on
	- line 2587: // TODO: Move this out of here!
	- line 2590: // TODO: Another silent failure?
	- line 2695: // TODO (iskren): Use anchor date (like 1st Jan) to compute this.


app/libraries/Keycloak/Keycloak.php (3 lines):
	- line 111: // TODO: add state variable to request and put into session
	- line 401: // TODO: move this to IamAdminServices
	- line 441: // TODO: cache the result of the request


app/libraries/Wsis/Wsis.php (2 lines):
	- line 216: //FIXME hacky fix for the CILogon -> OpenID issue in WSO2 IS
	- line 499: //FIXME hacky fix for the CILogon -> OpenID issue in WSO2 IS


app/libraries/ExperimentUtilities.php (2 lines):
	- line 269: // TODO: sort taskStatuses by time and output them
	- line 1190: //TODO - implement following logic with new data model.


app/libraries/Airavata/Model/Data/Movement/Types.php (1 line):
	- line 40: * FIXME: Change GSI to a more precise generic security protocol - X509


app/controllers/HomeController.php (1 line):
	- line 25: // FIXME: can't figure out how to pass variables to the landingpage template


public/js/sharing/share.js (1 line):
	- line 245: // TODO: is this used any longer?  I don't see where resource_id gets


app/views/admin/manage-experiments.blade.php (1 line):
	- line 630: // TODO: update message to include username, appname and hostname?


app/libraries/URPUtilities.php (1 line):
	- line 98: // FIXME: for now assume that if a user is adding or updating a UserComputeResourcePreference then they have also validated that it works. It would be better to confirm that in Airavata.


app/controllers/FilemanagerController.php (1 line):
	- line 13: //FIXME check for no ../ parts in the path


app/routes.php (1 line):
	- line 168: //TODO check permission


app/libraries/Keycloak/KeycloakServiceProvider.php (1 line):
	- line 39: // TODO: we can derive this from tenant-domain and service-url


app/libraries/SharingUtilities.php (1 line):
	- line 82: // FIXME: instead of loading all user profiles it would be better to


app/controllers/GatewayprofileController.php (1 line):
	- line 19: //TODO:: Maybe this is a better way. Things to ponder upon.