id: 1 unit: private void xformStep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 474 end line: 802 size: 211 LOC McCabe index: 46 number of parameters: 7 id: 2 unit: public void processProcessEvent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 515 end line: 701 size: 148 LOC McCabe index: 24 number of parameters: 2 id: 3 unit: private T2Reference getNameForObject() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 147 end line: 343 size: 146 LOC McCabe index: 44 number of parameters: 4 id: 4 unit: private String processDataflowStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 272 end line: 488 size: 134 LOC McCabe index: 27 number of parameters: 3 id: 5 unit: public void processTrees() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 117 end line: 264 size: 122 LOC McCabe index: 20 number of parameters: 2 id: 6 unit: public Edit getMapProcessorPortsForActivityEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 979 end line: 1112 size: 121 LOC McCabe index: 30 number of parameters: 1 id: 7 unit: public void registerNode() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 161 end line: 285 size: 117 LOC McCabe index: 20 number of parameters: 3 id: 8 unit: public static VisitReport contactEndpoint() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 105 end line: 225 size: 116 LOC McCabe index: 24 number of parameters: 2 id: 9 unit: private void loadTruststore() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 467 end line: 655 size: 109 LOC McCabe index: 19 number of parameters: 0 id: 10 unit: public void exportAsW3Prov() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 255 end line: 431 size: 105 LOC McCabe index: 4 number of parameters: 0 id: 11 unit: private List processPortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1157 end line: 1275 size: 87 LOC McCabe index: 12 number of parameters: 10 id: 12 unit: private TreeModel removeType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TreeModelAdapter.java start line: 77 end line: 172 size: 85 LOC McCabe index: 4 number of parameters: 1 id: 13 unit: public void writeBundle() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 831 end line: 955 size: 82 LOC McCabe index: 4 number of parameters: 1 id: 14 unit: public ParsedDistinguishedNameImpl() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 116 end line: 227 size: 75 LOC McCabe index: 34 number of parameters: 1 id: 15 unit: public void injectPropertiesFor() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 198 end line: 282 size: 74 LOC McCabe index: 3 number of parameters: 1 id: 16 unit: public final Set augmentReferenceSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 198 end line: 299 size: 74 LOC McCabe index: 20 number of parameters: 3 id: 17 unit: public void importGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 122 end line: 245 size: 71 LOC McCabe index: 22 number of parameters: 1 id: 18 unit: public void changeMasterPassword() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1833 end line: 1924 size: 69 LOC McCabe index: 8 number of parameters: 1 id: 19 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 318 end line: 397 size: 67 LOC McCabe index: 4 number of parameters: 1 id: 20 unit: public void traverse() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 167 end line: 281 size: 66 LOC McCabe index: 19 number of parameters: 4 id: 21 unit: private void addActivity() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 357 end line: 432 size: 66 LOC McCabe index: 8 number of parameters: 1 id: 22 unit: public Run() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 82 end line: 147 size: 65 LOC McCabe index: 10 number of parameters: 1 id: 23 unit: protected PasswordAuthentication getPasswordAuthentication() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerAuthenticator.java start line: 60 end line: 130 size: 64 LOC McCabe index: 17 number of parameters: 0 id: 24 unit: protected ProcessorImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 98 end line: 192 size: 63 LOC McCabe index: 6 number of parameters: 0 id: 25 unit: public UsernamePassword getUsernameAndPasswordForService() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 754 end line: 835 size: 61 LOC McCabe index: 10 number of parameters: 3 id: 26 unit: public void convertReferenceToPath() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 425 end line: 487 size: 61 LOC McCabe index: 16 number of parameters: 3 id: 27 unit: public List getProcessorEnactmentsByProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1635 end line: 1701 size: 61 LOC McCabe index: 13 number of parameters: 3 id: 28 unit: public DataflowInvocation getDataflowInvocation() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1940 end line: 2001 size: 61 LOC McCabe index: 4 number of parameters: 1 id: 29 unit: private Object renderIdentifierInner() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 464 end line: 533 size: 60 LOC McCabe index: 16 number of parameters: 4 id: 30 unit: public void receiveResult() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 316 end line: 380 size: 58 LOC McCabe index: 13 number of parameters: 2 id: 31 unit: public void injectPropertiesFor() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 231 end line: 300 size: 57 LOC McCabe index: 2 number of parameters: 1 id: 32 unit: public synchronized DataflowValidationReport checkValidityImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 495 end line: 640 size: 56 LOC McCabe index: 18 number of parameters: 0 id: 33 unit: public synchronized void setState() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 514 end line: 570 size: 56 LOC McCabe index: 12 number of parameters: 1 id: 34 unit: protected void storeEntitities() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 547 end line: 615 size: 56 LOC McCabe index: 11 number of parameters: 4 id: 35 unit: private void processWDF() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 475 end line: 555 size: 56 LOC McCabe index: 12 number of parameters: 1 id: 36 unit: public void reconcileLocalOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 835 end line: 956 size: 56 LOC McCabe index: 8 number of parameters: 1 id: 37 unit: public void propagateANL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1412 end line: 1512 size: 56 LOC McCabe index: 14 number of parameters: 1 id: 38 unit: protected synchronized void loadPROVO() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 263 end line: 322 size: 53 LOC McCabe index: 2 number of parameters: 0 id: 39 unit: protected void storeFileReferences() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 473 end line: 541 size: 53 LOC McCabe index: 12 number of parameters: 0 id: 40 unit: public void executeAsynch() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivity.java start line: 73 end line: 139 size: 52 LOC McCabe index: 6 number of parameters: 2 id: 41 unit: public Map getProcessorsIncomingLinks() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 552 end line: 619 size: 52 LOC McCabe index: 8 number of parameters: 1 id: 42 unit: public Identified resolveIdentifier() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 370 end line: 427 size: 51 LOC McCabe index: 13 number of parameters: 3 id: 43 unit: private void backpatchIterationResults() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 990 end line: 1051 size: 49 LOC McCabe index: 9 number of parameters: 1 id: 44 unit: protected void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 121 end line: 173 size: 48 LOC McCabe index: 7 number of parameters: 2 id: 45 unit: private void assignNamesTo() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractCrystalizer.java start line: 127 end line: 191 size: 47 LOC McCabe index: 10 number of parameters: 2 id: 46 unit: private void addDataLinks() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 434 end line: 484 size: 47 LOC McCabe index: 8 number of parameters: 2 id: 47 unit: protected void invoke() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 128 end line: 206 size: 46 LOC McCabe index: 6 number of parameters: 2 id: 48 unit: public void innerReceiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/PrefixDotProduct.java start line: 45 end line: 109 size: 46 LOC McCabe index: 9 number of parameters: 2 id: 49 unit: private Path writeIfLocal() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 185 end line: 238 size: 46 LOC McCabe index: 8 number of parameters: 3 id: 50 unit: public static Edit getCreateAndConnectDatalinkEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 229 end line: 277 size: 45 LOC McCabe index: 3 number of parameters: 4 id: 51 unit: public DataflowInvocation getDataflowInvocation() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1894 end line: 1938 size: 45 LOC McCabe index: 4 number of parameters: 1 id: 52 unit: private ListIterator getCheckedListIterator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 136 end line: 187 size: 44 LOC McCabe index: 1 number of parameters: 1 id: 53 unit: private void processInput() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1059 end line: 1121 size: 44 LOC McCabe index: 9 number of parameters: 3 id: 54 unit: public static void pruneAnnotations() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/AnnotationTools.java start line: 127 end line: 169 size: 43 LOC McCabe index: 12 number of parameters: 2 id: 55 unit: public WorkflowInstanceFacadeImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 118 end line: 188 size: 43 LOC McCabe index: 6 number of parameters: 3 id: 56 unit: public static Edit getEnableDisabledActivityEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 399 end line: 443 size: 42 LOC McCabe index: 8 number of parameters: 3 id: 57 unit: public Iterator traverseFrom() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 557 end line: 598 size: 42 LOC McCabe index: 9 number of parameters: 2 id: 58 unit: private Port processProcessArtifactDep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 260 end line: 312 size: 42 LOC McCabe index: 4 number of parameters: 6 id: 59 unit: private void processUsed() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 348 end line: 401 size: 42 LOC McCabe index: 7 number of parameters: 1 id: 60 unit: public ProcessorEnactment getProcessorEnactmentByProcessId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1772 end line: 1815 size: 42 LOC McCabe index: 4 number of parameters: 3 id: 61 unit: public void deleteRevokedCertificates() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 230 end line: 286 size: 41 LOC McCabe index: 9 number of parameters: 0 id: 62 unit: private boolean shouldTrust() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2287 end line: 2344 size: 41 LOC McCabe index: 11 number of parameters: 1 id: 63 unit: private void processWGBy() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 411 end line: 460 size: 41 LOC McCabe index: 7 number of parameters: 1 id: 64 unit: public List getRuns() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 343 end line: 385 size: 41 LOC McCabe index: 8 number of parameters: 2 id: 65 unit: protected static EventForwardingOutputPort findEventHandlingOutputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 165 end line: 211 size: 40 LOC McCabe index: 8 number of parameters: 4 id: 66 unit: protected void parseDates() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 269 end line: 325 size: 40 LOC McCabe index: 13 number of parameters: 2 id: 67 unit: public Edit getConnectMergedDatalinkEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 509 end line: 549 size: 40 LOC McCabe index: 7 number of parameters: 3 id: 68 unit: private void addProcessors() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 191 end line: 238 size: 40 LOC McCabe index: 6 number of parameters: 2 id: 69 unit: public String createTrustedCertificateAlias() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1470 end line: 1513 size: 39 LOC McCabe index: 7 number of parameters: 1 id: 70 unit: protected IterationProvenanceItem getIterationProvItem() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 115 end line: 244 size: 39 LOC McCabe index: 4 number of parameters: 1 id: 71 unit: public ErrorDocument registerError() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 57 end line: 97 size: 39 LOC McCabe index: 8 number of parameters: 4 id: 72 unit: private String findMimeType() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 282 end line: 320 size: 39 LOC McCabe index: 10 number of parameters: 1 id: 73 unit: public ProcessorEnactment getProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1731 end line: 1770 size: 39 LOC McCabe index: 4 number of parameters: 1 id: 74 unit: protected LinkedHashSet getPossibleServiceURIsToLookup() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 885 end line: 941 size: 38 LOC McCabe index: 11 number of parameters: 2 id: 75 unit: protected static EventHandlingInputPort findEventHandlingInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 101 end line: 143 size: 38 LOC McCabe index: 8 number of parameters: 4 id: 76 unit: protected void checkWorkflowFinished() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 448 end line: 493 size: 38 LOC McCabe index: 10 number of parameters: 1 id: 77 unit: public IdentifiedList registerList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ListServiceImpl.java start line: 74 end line: 117 size: 38 LOC McCabe index: 7 number of parameters: 2 id: 78 unit: private void addIterationStrategyNode() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 318 end line: 355 size: 38 LOC McCabe index: 7 number of parameters: 3 id: 79 unit: public String getContainingCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1562 end line: 1603 size: 38 LOC McCabe index: 8 number of parameters: 1 id: 80 unit: public List getDataflowInvocations() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 2003 end line: 2040 size: 38 LOC McCabe index: 3 number of parameters: 1 id: 81 unit: protected void fillFromQueue() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 355 end line: 396 size: 37 LOC McCabe index: 6 number of parameters: 0 id: 82 unit: public boolean doTypeCheck() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 208 end line: 273 size: 36 LOC McCabe index: 10 number of parameters: 0 id: 83 unit: private void addDispatchStack() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 240 end line: 279 size: 36 LOC McCabe index: 4 number of parameters: 2 id: 84 unit: public void close() file: taverna-prov/src/main/java/org/apache/taverna/prov/SafeFileOutputStream.java start line: 82 end line: 130 size: 36 LOC McCabe index: 8 number of parameters: 0 id: 85 unit: public ShortestPathSolver() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 370 end line: 406 size: 35 LOC McCabe index: 8 number of parameters: 1 id: 86 unit: public List getSuccPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 621 end line: 658 size: 35 LOC McCabe index: 6 number of parameters: 3 id: 87 unit: private void loadKeystore() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 391 end line: 459 size: 34 LOC McCabe index: 6 number of parameters: 0 id: 88 unit: private SSLSocketFactory createSSLSocketFactory() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1950 end line: 2001 size: 34 LOC McCabe index: 5 number of parameters: 0 id: 89 unit: public void executeAsynch() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__Activity.java start line: 83 end line: 147 size: 34 LOC McCabe index: 4 number of parameters: 2 id: 90 unit: protected Individual describeEntity() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 617 end line: 655 size: 34 LOC McCabe index: 6 number of parameters: 1 id: 91 unit: public void addArtifact() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 116 end line: 156 size: 34 LOC McCabe index: 6 number of parameters: 2 id: 92 unit: public List getPortBindings() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 396 end line: 434 size: 34 LOC McCabe index: 5 number of parameters: 1 id: 93 unit: public Map getDataBindings() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1817 end line: 1851 size: 34 LOC McCabe index: 4 number of parameters: 1 id: 94 unit: public void addProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 265 end line: 299 size: 34 LOC McCabe index: 2 number of parameters: 1 id: 95 unit: public boolean configurationWouldWork() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 152 end line: 185 size: 33 LOC McCabe index: 8 number of parameters: 1 id: 96 unit: public void receiveToken() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 87 end line: 138 size: 33 LOC McCabe index: 8 number of parameters: 1 id: 97 unit: public void pushData() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 301 end line: 337 size: 33 LOC McCabe index: 7 number of parameters: 2 id: 98 unit: public Set doTranslation() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 87 end line: 130 size: 33 LOC McCabe index: 10 number of parameters: 2 id: 99 unit: public void patchTopLevelnputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 763 end line: 819 size: 33 LOC McCabe index: 6 number of parameters: 0 id: 100 unit: protected void processEvent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 149 end line: 196 size: 33 LOC McCabe index: 4 number of parameters: 2 id: 101 unit: protected Map getFragmentMappedURIsForAllUsernameAndPasswordPairs() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 837 end line: 875 size: 32 LOC McCabe index: 7 number of parameters: 0 id: 102 unit: public void receiveResult() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 308 end line: 351 size: 32 LOC McCabe index: 7 number of parameters: 2 id: 103 unit: public synchronized void innerReceiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 54 end line: 104 size: 32 LOC McCabe index: 9 number of parameters: 2 id: 104 unit: protected void parseInvocation() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 213 end line: 248 size: 32 LOC McCabe index: 7 number of parameters: 3 id: 105 unit: public abstract Job getEmptyJob() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractCrystalizer.java start line: 52 end line: 97 size: 32 LOC McCabe index: 6 number of parameters: 3 id: 106 unit: public void start() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 135 end line: 170 size: 32 LOC McCabe index: 6 number of parameters: 0 id: 107 unit: private URI referenceAsURI() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 240 end line: 271 size: 32 LOC McCabe index: 7 number of parameters: 1 id: 108 unit: public void exportKeyPair() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1242 end line: 1291 size: 31 LOC McCabe index: 2 number of parameters: 3 id: 109 unit: private void init() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2182 end line: 2228 size: 31 LOC McCabe index: 5 number of parameters: 0 id: 110 unit: public void receiveCompletion() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 267 end line: 305 size: 31 LOC McCabe index: 7 number of parameters: 1 id: 111 unit: public void resultTokenProduced() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 369 end line: 402 size: 31 LOC McCabe index: 7 number of parameters: 2 id: 112 unit: public ErrorDocument registerError() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 100 end line: 133 size: 31 LOC McCabe index: 7 number of parameters: 4 id: 113 unit: private void mapReports() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 108 end line: 138 size: 31 LOC McCabe index: 5 number of parameters: 3 id: 114 unit: protected static URI getPluginIdentifier() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 958 end line: 1020 size: 31 LOC McCabe index: 4 number of parameters: 1 id: 115 unit: public List searchDataflowGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 402 end line: 453 size: 31 LOC McCabe index: 5 number of parameters: 6 id: 116 unit: public List queryDD() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1422 end line: 1453 size: 31 LOC McCabe index: 6 number of parameters: 5 id: 117 unit: public void clearDBStatic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 523 end line: 553 size: 31 LOC McCabe index: 1 number of parameters: 1 id: 118 unit: public String addKeyPair() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1138 end line: 1186 size: 30 LOC McCabe index: 2 number of parameters: 2 id: 119 unit: public synchronized void innerReceiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/DotProduct.java start line: 44 end line: 86 size: 30 LOC McCabe index: 8 number of parameters: 2 id: 120 unit: public Path saveReference() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 150 end line: 183 size: 30 LOC McCabe index: 4 number of parameters: 2 id: 121 unit: public Map getPredecessorsCount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 463 end line: 498 size: 30 LOC McCabe index: 8 number of parameters: 1 id: 122 unit: private Set collectValueReferences() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 595 end line: 625 size: 30 LOC McCabe index: 8 number of parameters: 1 id: 123 unit: public String saveUsernameAndPasswordForService() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1038 end line: 1088 size: 29 LOC McCabe index: 3 number of parameters: 3 id: 124 unit: public String toString() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 69 end line: 97 size: 29 LOC McCabe index: 2 number of parameters: 0 id: 125 unit: private void addProcessor() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 99 end line: 134 size: 29 LOC McCabe index: 4 number of parameters: 5 id: 126 unit: private void checkCondition() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 179 end line: 207 size: 29 LOC McCabe index: 3 number of parameters: 1 id: 127 unit: private InvocationContext createContext() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 206 end line: 239 size: 29 LOC McCabe index: 3 number of parameters: 0 id: 128 unit: public Map getPredecessorsCountOld() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 506 end line: 536 size: 29 LOC McCabe index: 3 number of parameters: 1 id: 129 unit: public LineageSQLQuery generateSQL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 981 end line: 1019 size: 29 LOC McCabe index: 7 number of parameters: 4 id: 130 unit: protected DefaultMutableTreeNode nodeAtProcessPath() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 171 end line: 199 size: 28 LOC McCabe index: 8 number of parameters: 2 id: 131 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 57 end line: 84 size: 28 LOC McCabe index: 5 number of parameters: 0 id: 132 unit: public List getPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 169 end line: 198 size: 28 LOC McCabe index: 4 number of parameters: 1 id: 133 unit: public Set queryDataLinksForDD() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1455 end line: 1483 size: 28 LOC McCabe index: 3 number of parameters: 4 id: 134 unit: public void addDataflowInvocation() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 111 end line: 139 size: 28 LOC McCabe index: 1 number of parameters: 1 id: 135 unit: private void saveKeystore() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1783 end line: 1813 size: 27 LOC McCabe index: 4 number of parameters: 1 id: 136 unit: private void init() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2034 end line: 2077 size: 27 LOC McCabe index: 5 number of parameters: 0 id: 137 unit: public void normalize() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 307 end line: 342 size: 27 LOC McCabe index: 10 number of parameters: 0 id: 138 unit: public ReferenceSet getReferenceSetWithAugmentation() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetServiceImpl.java start line: 75 end line: 115 size: 27 LOC McCabe index: 5 number of parameters: 3 id: 139 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 152 end line: 178 size: 27 LOC McCabe index: 1 number of parameters: 0 id: 140 unit: private Port findPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 729 end line: 756 size: 27 LOC McCabe index: 5 number of parameters: 3 id: 141 unit: public List getDataLinks() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 246 end line: 276 size: 27 LOC McCabe index: 3 number of parameters: 1 id: 142 unit: public Dependencies runVBQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1060 end line: 1092 size: 27 LOC McCabe index: 3 number of parameters: 2 id: 143 unit: public void addWorkflowDataItem() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 72 end line: 106 size: 27 LOC McCabe index: 5 number of parameters: 1 id: 144 unit: public void setConfigurationDirectoryPath() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2453 end line: 2483 size: 26 LOC McCabe index: 5 number of parameters: 1 id: 145 unit: private void sendErrorOutput() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 138 end line: 164 size: 26 LOC McCabe index: 4 number of parameters: 3 id: 146 unit: public void pushToken() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 59 end line: 85 size: 26 LOC McCabe index: 5 number of parameters: 3 id: 147 unit: protected void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 161 end line: 207 size: 26 LOC McCabe index: 4 number of parameters: 1 id: 148 unit: public void deleteReferencesForWorkflowRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 704 end line: 729 size: 26 LOC McCabe index: 5 number of parameters: 1 id: 149 unit: public boolean equals() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 257 end line: 282 size: 26 LOC McCabe index: 13 number of parameters: 1 id: 150 unit: public synchronized void setTranslators() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 130 end line: 155 size: 26 LOC McCabe index: 4 number of parameters: 1 id: 151 unit: public SafeFileOutputStream() file: taverna-prov/src/main/java/org/apache/taverna/prov/SafeFileOutputStream.java start line: 46 end line: 74 size: 26 LOC McCabe index: 6 number of parameters: 2 id: 152 unit: public void addProcess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 199 end line: 239 size: 26 LOC McCabe index: 5 number of parameters: 4 id: 153 unit: public static Element getDataItemAsXML() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceUtils.java start line: 56 end line: 81 size: 26 LOC McCabe index: 3 number of parameters: 1 id: 154 unit: protected LineageSQLQuery generateSQL2() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 933 end line: 962 size: 26 LOC McCabe index: 7 number of parameters: 5 id: 155 unit: public Dependencies runCollectionQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1021 end line: 1051 size: 26 LOC McCabe index: 4 number of parameters: 1 id: 156 unit: private void deleteEntry() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1587 end line: 1614 size: 25 LOC McCabe index: 6 number of parameters: 2 id: 157 unit: protected boolean finishWith() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 406 end line: 451 size: 25 LOC McCabe index: 6 number of parameters: 1 id: 158 unit: private EventHandlingInputPort findSinkPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 369 end line: 399 size: 25 LOC McCabe index: 8 number of parameters: 1 id: 159 unit: public final Identified getObject() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/WriteQueueAspect.java start line: 70 end line: 100 size: 25 LOC McCabe index: 8 number of parameters: 1 id: 160 unit: protected synchronized final void update() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 158 end line: 182 size: 25 LOC McCabe index: 9 number of parameters: 0 id: 161 unit: protected void addStackTrace() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 742 end line: 767 size: 25 LOC McCabe index: 6 number of parameters: 2 id: 162 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 144 end line: 168 size: 25 LOC McCabe index: 1 number of parameters: 0 id: 163 unit: public String processWorkflowStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 213 end line: 244 size: 25 LOC McCabe index: 5 number of parameters: 1 id: 164 unit: public List getCollectionsForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 2042 end line: 2066 size: 25 LOC McCabe index: 3 number of parameters: 1 id: 165 unit: public void addPortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 375 end line: 402 size: 25 LOC McCabe index: 1 number of parameters: 1 id: 166 unit: private void initialize() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 312 end line: 347 size: 24 LOC McCabe index: 4 number of parameters: 0 id: 167 unit: private boolean loadJavaTruststoreUsingPasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 670 end line: 693 size: 24 LOC McCabe index: 4 number of parameters: 2 id: 168 unit: private BasicEventForwardingOutputPort findSourcePort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 337 end line: 366 size: 24 LOC McCabe index: 8 number of parameters: 1 id: 169 unit: public void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 127 end line: 162 size: 24 LOC McCabe index: 6 number of parameters: 1 id: 170 unit: public void deregisterNode() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 287 end line: 311 size: 24 LOC McCabe index: 6 number of parameters: 1 id: 171 unit: public QueryAnswer lineageQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 227 end line: 274 size: 24 LOC McCabe index: 4 number of parameters: 3 id: 172 unit: public List computeLineageSingleBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 360 end line: 389 size: 24 LOC McCabe index: 1 number of parameters: 6 id: 173 unit: public List tsort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1376 end line: 1409 size: 24 LOC McCabe index: 10 number of parameters: 6 id: 174 unit: public List getProcessorsForWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 837 end line: 860 size: 24 LOC McCabe index: 3 number of parameters: 1 id: 175 unit: private ProcessorEnactment readProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1703 end line: 1729 size: 24 LOC McCabe index: 1 number of parameters: 1 id: 176 unit: public static void initDataSource() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 138 end line: 163 size: 24 LOC McCabe index: 4 number of parameters: 7 id: 177 unit: public boolean hasEntryWithAlias() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1620 end line: 1645 size: 23 LOC McCabe index: 4 number of parameters: 2 id: 178 unit: public List getServiceURIsForAllUsernameAndPasswordPairs() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1685 end line: 1716 size: 23 LOC McCabe index: 5 number of parameters: 0 id: 179 unit: public synchronized void startDerbyNetworkServer() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 76 end line: 100 size: 23 LOC McCabe index: 5 number of parameters: 0 id: 180 unit: public Map getDefaultPropertyMap() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 173 end line: 199 size: 23 LOC McCabe index: 2 number of parameters: 0 id: 181 unit: public WorkflowReport generateWorkflowReport() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecution.java start line: 84 end line: 106 size: 23 LOC McCabe index: 4 number of parameters: 1 id: 182 unit: public List getDereferenceBasedPaths() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 163 end line: 208 size: 23 LOC McCabe index: 7 number of parameters: 1 id: 183 unit: private Path saveValue() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 683 end line: 707 size: 23 LOC McCabe index: 5 number of parameters: 2 id: 184 unit: private String processDataBindings() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 703 end line: 727 size: 23 LOC McCabe index: 4 number of parameters: 2 id: 185 unit: public List getNestedListNodes() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 436 end line: 461 size: 23 LOC McCabe index: 3 number of parameters: 1 id: 186 unit: private List getProcessorEnactments() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1611 end line: 1633 size: 23 LOC McCabe index: 5 number of parameters: 3 id: 187 unit: public void addPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 85 end line: 108 size: 23 LOC McCabe index: 4 number of parameters: 2 id: 188 unit: public void replaceCollectionRecord() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 473 end line: 497 size: 23 LOC McCabe index: 3 number of parameters: 3 id: 189 unit: public Certificate getCertificate() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1301 end line: 1325 size: 22 LOC McCabe index: 4 number of parameters: 2 id: 190 unit: public ArrayList getAliases() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1652 end line: 1676 size: 22 LOC McCabe index: 4 number of parameters: 1 id: 191 unit: public static TokenProcessingEntity getTokenProcessingEntityWithEventHandlingInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 614 end line: 643 size: 22 LOC McCabe index: 11 number of parameters: 2 id: 192 unit: public String toString() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 391 end line: 412 size: 22 LOC McCabe index: 4 number of parameters: 0 id: 193 unit: public Edit getConnectProcessorOutputEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 434 end line: 456 size: 22 LOC McCabe index: 4 number of parameters: 3 id: 194 unit: public Object renderIdentifier() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 430 end line: 462 size: 22 LOC McCabe index: 7 number of parameters: 3 id: 195 unit: public LocalExecution() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 106 end line: 127 size: 22 LOC McCabe index: 3 number of parameters: 8 id: 196 unit: protected void saveToFolder() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 322 end line: 344 size: 22 LOC McCabe index: 2 number of parameters: 3 id: 197 unit: public String getMessageDigestAsFormattedString() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 120 end line: 151 size: 21 LOC McCabe index: 5 number of parameters: 2 id: 198 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 70 end line: 99 size: 21 LOC McCabe index: 7 number of parameters: 1 id: 199 unit: public void receiveResult() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 410 end line: 457 size: 21 LOC McCabe index: 2 number of parameters: 1 id: 200 unit: public static TokenProcessingEntity getTokenProcessingEntityWithEventForwardingOutputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 574 end line: 602 size: 21 LOC McCabe index: 10 number of parameters: 2 id: 201 unit: protected ProcessorReport parseProcessorReport() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 167 end line: 192 size: 21 LOC McCabe index: 3 number of parameters: 4 id: 202 unit: protected synchronized void loadWfprov() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 101 end line: 129 size: 21 LOC McCabe index: 2 number of parameters: 0 id: 203 unit: public Edit getAddProcessorInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 282 end line: 310 size: 21 LOC McCabe index: 3 number of parameters: 2 id: 204 unit: public Edit getAddAnnotationAssertionEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 474 end line: 495 size: 21 LOC McCabe index: 2 number of parameters: 2 id: 205 unit: public Edit getDefaultDispatchStackEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1117 end line: 1139 size: 21 LOC McCabe index: 1 number of parameters: 1 id: 206 unit: private void addProvenanceLayerToProcessors() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 190 end line: 216 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 207 unit: public final void getReferenceSetWithAugmentationAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 137 end line: 157 size: 21 LOC McCabe index: 2 number of parameters: 4 id: 208 unit: public final Identified getObject() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/CacheAspect.java start line: 66 end line: 92 size: 21 LOC McCabe index: 6 number of parameters: 1 id: 209 unit: public T2Reference referenceFromString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 621 end line: 643 size: 21 LOC McCabe index: 4 number of parameters: 1 id: 210 unit: public void putObject() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/WriteQueueAspect.java start line: 112 end line: 136 size: 21 LOC McCabe index: 3 number of parameters: 1 id: 211 unit: private void relaxNeighbours() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 409 end line: 434 size: 21 LOC McCabe index: 5 number of parameters: 1 id: 212 unit: private boolean isValidExecutionEnvironment() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 90 end line: 133 size: 21 LOC McCabe index: 4 number of parameters: 2 id: 213 unit: public String getParentOfWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1299 end line: 1321 size: 21 LOC McCabe index: 3 number of parameters: 1 id: 214 unit: public Set queryAllFromValues() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1485 end line: 1505 size: 21 LOC McCabe index: 3 number of parameters: 1 id: 215 unit: public String addCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 301 end line: 326 size: 21 LOC McCabe index: 2 number of parameters: 6 id: 216 unit: public int run() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductTest.java start line: 83 end line: 109 size: 20 LOC McCabe index: 2 number of parameters: 1 id: 217 unit: protected void configurePorts() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 210 end line: 235 size: 20 LOC McCabe index: 4 number of parameters: 1 id: 218 unit: private AbstractIterationStrategyNode nodeForElement() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 132 end line: 151 size: 20 LOC McCabe index: 6 number of parameters: 1 id: 219 unit: public synchronized boolean cancelWorkflowRun() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 583 end line: 602 size: 20 LOC McCabe index: 5 number of parameters: 0 id: 220 unit: public synchronized URI toUri() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 224 end line: 243 size: 20 LOC McCabe index: 6 number of parameters: 0 id: 221 unit: public Resource addArtifact() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 165 end line: 187 size: 20 LOC McCabe index: 5 number of parameters: 1 id: 222 unit: public List getOrphanArtifacts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 97 end line: 120 size: 20 LOC McCabe index: 7 number of parameters: 0 id: 223 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 64 end line: 83 size: 20 LOC McCabe index: 10 number of parameters: 1 id: 224 unit: public List toposort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1333 end line: 1364 size: 20 LOC McCabe index: 5 number of parameters: 2 id: 225 unit: public boolean isRootProcessorOfWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1507 end line: 1526 size: 20 LOC McCabe index: 3 number of parameters: 3 id: 226 unit: public Workflow getWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1533 end line: 1553 size: 20 LOC McCabe index: 3 number of parameters: 1 id: 227 unit: public void updatePortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 447 end line: 471 size: 20 LOC McCabe index: 2 number of parameters: 1 id: 228 unit: public String addTrustedCertificate() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1387 end line: 1421 size: 19 LOC McCabe index: 2 number of parameters: 1 id: 229 unit: public boolean resetAuthCache() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2391 end line: 2410 size: 19 LOC McCabe index: 2 number of parameters: 0 id: 230 unit: public int run() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/DotProductTest.java start line: 73 end line: 99 size: 19 LOC McCabe index: 2 number of parameters: 1 id: 231 unit: public void initialize() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 52 end line: 77 size: 19 LOC McCabe index: 3 number of parameters: 2 id: 232 unit: public DispatchLayer createDispatchLayer() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.java start line: 72 end line: 90 size: 19 LOC McCabe index: 9 number of parameters: 1 id: 233 unit: private void insertJobAt() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 67 end line: 87 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 234 unit: public synchronized void insert() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 122 end line: 145 size: 19 LOC McCabe index: 8 number of parameters: 2 id: 235 unit: private Set merge() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 106 end line: 124 size: 19 LOC McCabe index: 5 number of parameters: 2 id: 236 unit: public GreenReference createReference() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/GreenBuilder.java start line: 57 end line: 76 size: 19 LOC McCabe index: 3 number of parameters: 2 id: 237 unit: public ProvModel() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 119 end line: 139 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 238 unit: void registerWithMonitor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 357 end line: 404 size: 19 LOC McCabe index: 5 number of parameters: 1 id: 239 unit: public Edit getAddIterationStrategyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1188 end line: 1207 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 240 unit: public Edit getAddIterationStrategyInputNodeEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1210 end line: 1229 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 241 unit: public void resolveIdentifierAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 151 end line: 169 size: 19 LOC McCabe index: 2 number of parameters: 4 id: 242 unit: public synchronized void setBuilders() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 101 end line: 120 size: 19 LOC McCabe index: 4 number of parameters: 1 id: 243 unit: public void notify() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 141 end line: 159 size: 19 LOC McCabe index: 6 number of parameters: 2 id: 244 unit: private void addIterationStrategy() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 293 end line: 316 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 245 unit: public void initGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 107 end line: 127 size: 19 LOC McCabe index: 6 number of parameters: 0 id: 246 unit: private void xferStep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 804 end line: 843 size: 19 LOC McCabe index: 2 number of parameters: 6 id: 247 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 51 end line: 69 size: 19 LOC McCabe index: 3 number of parameters: 0 id: 248 unit: public List getWorkflowsForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 304 end line: 322 size: 19 LOC McCabe index: 3 number of parameters: 1 id: 249 unit: private List getProcessors() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 817 end line: 835 size: 19 LOC McCabe index: 2 number of parameters: 2 id: 250 unit: public void writeDDRecord() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 647 end line: 665 size: 19 LOC McCabe index: 2 number of parameters: 8 id: 251 unit: public void addLineageQueryResultRecord() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 62 end line: 83 size: 19 LOC McCabe index: 1 number of parameters: 12 id: 252 unit: public void receiveResult() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 158 end line: 175 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 253 unit: public synchronized Object doEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/CompoundEdit.java start line: 64 end line: 87 size: 18 LOC McCabe index: 5 number of parameters: 0 id: 254 unit: public static AnnotationBeanSPI getAnnotation() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/AnnotationTools.java start line: 51 end line: 68 size: 18 LOC McCabe index: 6 number of parameters: 2 id: 255 unit: public final OrderedPair applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractBinaryProcessorEdit.java start line: 47 end line: 74 size: 18 LOC McCabe index: 2 number of parameters: 0 id: 256 unit: public Edit getDisconnectDatalinkEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 695 end line: 714 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 257 unit: public IdentifiedList registerEmptyList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ListServiceImpl.java start line: 54 end line: 71 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 258 unit: public final void getReferenceSetAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 114 end line: 131 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 259 unit: public final void getErrorAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 88 end line: 105 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 260 unit: public final void augmentReferenceSetAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 312 end line: 329 size: 18 LOC McCabe index: 2 number of parameters: 4 id: 261 unit: public Set getActivityOutputPorts() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 101 end line: 118 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 262 unit: private boolean isValidActivityConfiguration() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 135 end line: 153 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 263 unit: public WorkflowToDataflowMapper() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 113 end line: 130 size: 18 LOC McCabe index: 1 number of parameters: 5 id: 264 unit: private Path saveIntermediate() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 661 end line: 681 size: 18 LOC McCabe index: 4 number of parameters: 1 id: 265 unit: public void executeAsynch() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivity.java start line: 77 end line: 97 size: 18 LOC McCabe index: 2 number of parameters: 2 id: 266 unit: public List getSuccProcessors() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 660 end line: 677 size: 18 LOC McCabe index: 3 number of parameters: 3 id: 267 unit: public ProvenanceProcessor getProvenanceProcessorByName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 707 end line: 724 size: 18 LOC McCabe index: 3 number of parameters: 2 id: 268 unit: public LineageSQLQuery simpleLineageQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 871 end line: 894 size: 18 LOC McCabe index: 3 number of parameters: 5 id: 269 unit: public List lineageQueryGen() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 909 end line: 931 size: 18 LOC McCabe index: 5 number of parameters: 6 id: 270 unit: public void addDataLink() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 148 end line: 166 size: 18 LOC McCabe index: 1 number of parameters: 3 id: 271 unit: public void addDataBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 168 end line: 185 size: 18 LOC McCabe index: 2 number of parameters: 1 id: 272 unit: public void updatePort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 410 end line: 427 size: 18 LOC McCabe index: 3 number of parameters: 1 id: 273 unit: private String getMasterPassword() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 357 end line: 386 size: 17 LOC McCabe index: 5 number of parameters: 0 id: 274 unit: public static void main() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 68 end line: 88 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 275 unit: public Invocation() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 73 end line: 94 size: 17 LOC McCabe index: 4 number of parameters: 4 id: 276 unit: public VisitReport visit() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__ActivityHealthChecker.java start line: 53 end line: 78 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 277 unit: protected void initialise() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/config/__classPrefix__ConfigurationPanel.java start line: 46 end line: 69 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 278 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 101 end line: 117 size: 17 LOC McCabe index: 3 number of parameters: 0 id: 279 unit: public static ProcessorOutputPort getProcessorOutputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 462 end line: 478 size: 17 LOC McCabe index: 5 number of parameters: 3 id: 280 unit: public static List getNestedPathForProcessor() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 772 end line: 793 size: 17 LOC McCabe index: 5 number of parameters: 2 id: 281 unit: public Bundle getDataBundle() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 189 end line: 207 size: 17 LOC McCabe index: 4 number of parameters: 0 id: 282 unit: public String open() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 105 end line: 121 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 283 unit: protected synchronized void loadProvDictionary() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 241 end line: 261 size: 17 LOC McCabe index: 2 number of parameters: 0 id: 284 unit: protected synchronized void loadTavernaProv() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/TavernaProvModel.java start line: 88 end line: 108 size: 17 LOC McCabe index: 2 number of parameters: 0 id: 285 unit: public Edit getClearIterationStrategyStackEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1232 end line: 1249 size: 17 LOC McCabe index: 2 number of parameters: 1 id: 286 unit: public void satisfyConditions() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 176 end line: 202 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 287 unit: public int getIterationDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 61 end line: 88 size: 17 LOC McCabe index: 4 number of parameters: 1 id: 288 unit: private Map parseRef() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 652 end line: 678 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 289 unit: public Set getActivityInputPorts() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 82 end line: 98 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 290 unit: public void assertGeneratedBy() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 241 end line: 258 size: 17 LOC McCabe index: 9 number of parameters: 5 id: 291 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 141 end line: 157 size: 17 LOC McCabe index: 1 number of parameters: 0 id: 292 unit: public void init() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 291 end line: 309 size: 17 LOC McCabe index: 2 number of parameters: 0 id: 293 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 133 end line: 149 size: 17 LOC McCabe index: 8 number of parameters: 1 id: 294 unit: public ProvenanceProcessor getProvenanceProcessorById() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 726 end line: 742 size: 17 LOC McCabe index: 3 number of parameters: 1 id: 295 unit: public boolean isTopLevelDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1376 end line: 1392 size: 17 LOC McCabe index: 3 number of parameters: 2 id: 296 unit: public void checkServerTrusted() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2246 end line: 2266 size: 16 LOC McCabe index: 5 number of parameters: 2 id: 297 unit: public List getSplits() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputFormat.java start line: 70 end line: 105 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 298 unit: public int run() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/Test.java start line: 41 end line: 62 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 299 unit: public static Edit getDisconnectDatalinkAndRemovePortsEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 358 end line: 373 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 300 unit: public static ProcessorInputPort getProcessorInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 445 end line: 460 size: 16 LOC McCabe index: 5 number of parameters: 3 id: 301 unit: protected WorkflowReport parseWorkflowReport() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 146 end line: 165 size: 16 LOC McCabe index: 3 number of parameters: 4 id: 302 unit: public void notify() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 114 end line: 129 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 303 unit: public boolean doTypeCheck() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 188 end line: 220 size: 16 LOC McCabe index: 8 number of parameters: 0 id: 304 unit: public Dataflow getDataflow() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 136 end line: 151 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 305 unit: public VisitReport visit() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityHealthChecker.java start line: 36 end line: 51 size: 16 LOC McCabe index: 4 number of parameters: 2 id: 306 unit: public void assertUsed() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 260 end line: 277 size: 16 LOC McCabe index: 7 number of parameters: 5 id: 307 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 163 end line: 178 size: 16 LOC McCabe index: 1 number of parameters: 0 id: 308 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 224 end line: 239 size: 16 LOC McCabe index: 1 number of parameters: 0 id: 309 unit: public void clearDatabase() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 392 end line: 489 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 310 unit: public List getContainedProcessors() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1182 end line: 1201 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 311 unit: public String getTopLevelDataflowName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1203 end line: 1218 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 312 unit: public boolean isDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1345 end line: 1360 size: 16 LOC McCabe index: 4 number of parameters: 1 id: 313 unit: public String getTopDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1394 end line: 1409 size: 16 LOC McCabe index: 3 number of parameters: 1 id: 314 unit: public void updateProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 429 end line: 445 size: 16 LOC McCabe index: 2 number of parameters: 1 id: 315 unit: public String createKeyPairAlias() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1437 end line: 1457 size: 15 LOC McCabe index: 1 number of parameters: 2 id: 316 unit: boolean incrementFirstAvailable() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 123 end line: 137 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 317 unit: private void setupDataSource() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 126 end line: 145 size: 15 LOC McCabe index: 5 number of parameters: 0 id: 318 unit: public boolean handleError() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 106 end line: 120 size: 15 LOC McCabe index: 2 number of parameters: 0 id: 319 unit: private Map prepareInputs() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 209 end line: 226 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 320 unit: protected List getJobsCopy() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 184 end line: 199 size: 15 LOC McCabe index: 2 number of parameters: 1 id: 321 unit: public static boolean addDataflowIdentification() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 750 end line: 764 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 322 unit: protected void visitReportToStringBuffer() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 323 end line: 337 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 323 unit: private static Collection getExplicitMethodsForClass() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 346 end line: 361 size: 15 LOC McCabe index: 5 number of parameters: 1 id: 324 unit: public boolean equals() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 41 end line: 55 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 325 unit: protected ActivityReport parseActivityReport() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 194 end line: 211 size: 15 LOC McCabe index: 3 number of parameters: 4 id: 326 unit: public void showMonitorFrame() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 147 end line: 161 size: 15 LOC McCabe index: 1 number of parameters: 0 id: 327 unit: public synchronized List getLinks() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 414 end line: 437 size: 15 LOC McCabe index: 6 number of parameters: 0 id: 328 unit: protected boolean tokenReceived() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 682 end line: 703 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 329 unit: public Edit getAddProcessorEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 217 end line: 231 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 330 unit: public Edit getAddDataflowInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 760 end line: 774 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 331 unit: public Edit getRemoveProcessorInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 948 end line: 962 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 332 unit: public Edit getSetIterationStrategyStackEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1142 end line: 1156 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 333 unit: public synchronized void fire() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 255 end line: 270 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 334 unit: private void initReferenceNamespace() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractT2ReferenceGenerator.java start line: 44 end line: 63 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 335 unit: public ReferenceSet registerReferenceSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetServiceImpl.java start line: 118 end line: 134 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 336 unit: public final void getListAsynch() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractListServiceImpl.java start line: 84 end line: 98 size: 15 LOC McCabe index: 2 number of parameters: 2 id: 337 unit: T2ReferenceImpl getDeeperErrorReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 199 end line: 214 size: 15 LOC McCabe index: 3 number of parameters: 0 id: 338 unit: public DispatchLayer createDispatchLayer() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 72 end line: 87 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 339 unit: private boolean isValidDispatchLayerConfiguration() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 156 end line: 171 size: 15 LOC McCabe index: 3 number of parameters: 3 id: 340 unit: private String getReportId() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 352 end line: 366 size: 15 LOC McCabe index: 4 number of parameters: 1 id: 341 unit: public void resultTokenProduced() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 521 end line: 535 size: 15 LOC McCabe index: 5 number of parameters: 2 id: 342 unit: protected void addStackTrace() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 725 end line: 740 size: 15 LOC McCabe index: 3 number of parameters: 2 id: 343 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 39 end line: 53 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 344 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 41 end line: 55 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 345 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 49 end line: 63 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 346 unit: public boolean equals() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 36 end line: 50 size: 15 LOC McCabe index: 7 number of parameters: 1 id: 347 unit: public PortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/PortBinding.java start line: 39 end line: 53 size: 15 LOC McCabe index: 1 number of parameters: 1 id: 348 unit: private void processOutput() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 959 end line: 976 size: 15 LOC McCabe index: 4 number of parameters: 3 id: 349 unit: private void addToCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1155 end line: 1170 size: 15 LOC McCabe index: 4 number of parameters: 2 id: 350 unit: public List getChildrenOfWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1276 end line: 1290 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 351 unit: public void addData() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 328 end line: 347 size: 15 LOC McCabe index: 2 number of parameters: 3 id: 352 unit: public void init() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 205 end line: 226 size: 15 LOC McCabe index: 3 number of parameters: 1 id: 353 unit: public List next() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 139 end line: 155 size: 14 LOC McCabe index: 4 number of parameters: 0 id: 354 unit: public void receiveError() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 290 end line: 308 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 355 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 284 end line: 298 size: 14 LOC McCabe index: 1 number of parameters: 3 id: 356 unit: public final synchronized void setParent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 184 end line: 197 size: 14 LOC McCabe index: 8 number of parameters: 1 id: 357 unit: private void pingCompletionState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 108 end line: 121 size: 14 LOC McCabe index: 4 number of parameters: 4 id: 358 unit: public final Edit getAddAnnotationEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 128 end line: 142 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 359 unit: public final Edit getRemoveAnnotationEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 148 end line: 162 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 360 unit: protected VisitReport internalClone() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 348 end line: 361 size: 14 LOC McCabe index: 2 number of parameters: 1 id: 361 unit: protected static ObjectMapper makeObjectMapperForSave() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 96 end line: 109 size: 14 LOC McCabe index: 1 number of parameters: 0 id: 362 unit: public Component getTreeCellRendererComponent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 297 end line: 310 size: 14 LOC McCabe index: 4 number of parameters: 7 id: 363 unit: public Job getEmptyJob() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorCrystalizerImpl.java start line: 77 end line: 100 size: 14 LOC McCabe index: 3 number of parameters: 3 id: 364 unit: public Edit getAddMergeEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 234 end line: 247 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 365 unit: public Edit getAddActivityEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 266 end line: 279 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 366 unit: public Edit getDeleteDispatchLayerEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 351 end line: 366 size: 14 LOC McCabe index: 1 number of parameters: 2 id: 367 unit: public Edit getAddDataflowOutputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 777 end line: 790 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 368 unit: public Edit getAddMergeInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 925 end line: 938 size: 14 LOC McCabe index: 2 number of parameters: 2 id: 369 unit: private void applyChange() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 434 end line: 447 size: 14 LOC McCabe index: 4 number of parameters: 1 id: 370 unit: protected final void checkServices() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 99 end line: 112 size: 14 LOC McCabe index: 4 number of parameters: 0 id: 371 unit: public Activity createActivity() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 66 end line: 79 size: 14 LOC McCabe index: 3 number of parameters: 2 id: 372 unit: protected void prepareSesame() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 89 end line: 104 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 373 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 187 end line: 200 size: 14 LOC McCabe index: 1 number of parameters: 0 id: 374 unit: public List getAllworkflowIds() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1323 end line: 1336 size: 14 LOC McCabe index: 3 number of parameters: 0 id: 375 unit: public void addData() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 354 end line: 373 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 376 unit: private void delete() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 559 end line: 572 size: 14 LOC McCabe index: 2 number of parameters: 3 id: 377 unit: public Set clearDBDynamic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 578 end line: 593 size: 14 LOC McCabe index: 1 number of parameters: 1 id: 378 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 47 end line: 60 size: 14 LOC McCabe index: 4 number of parameters: 0 id: 379 unit: public final X509Certificate convertCertificate() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 98 end line: 114 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 380 unit: public String chooseClientAlias() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2080 end line: 2096 size: 13 LOC McCabe index: 3 number of parameters: 3 id: 381 unit: private void setDatalinks() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 61 end line: 73 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 382 unit: private Text f() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductTest.java start line: 64 end line: 80 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 383 unit: protected void map() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaMapper.java start line: 43 end line: 92 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 384 unit: public boolean isRunning() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 112 end line: 124 size: 13 LOC McCabe index: 3 number of parameters: 0 id: 385 unit: private void addDates() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 136 end line: 148 size: 13 LOC McCabe index: 3 number of parameters: 4 id: 386 unit: private int getLongestName() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 150 end line: 162 size: 13 LOC McCabe index: 4 number of parameters: 2 id: 387 unit: public boolean handleError() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 86 end line: 98 size: 13 LOC McCabe index: 2 number of parameters: 0 id: 388 unit: public static synchronized boolean resumeWorkflow() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 151 end line: 163 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 389 unit: public void requestRun() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 354 end line: 366 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 390 unit: public void receiveError() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 143 end line: 155 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 391 unit: public void receiveResultCompletion() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 183 end line: 195 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 392 unit: public void finishedWith() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 103 end line: 115 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 393 unit: private DispatchJobEvent prepareNewJobEvent() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 382 end line: 399 size: 13 LOC McCabe index: 1 number of parameters: 2 id: 394 unit: public void requestRun() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 402 end line: 414 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 395 unit: public String toString() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionEnvironment.java start line: 64 end line: 76 size: 13 LOC McCabe index: 3 number of parameters: 0 id: 396 unit: public void findServiceDescriptionsAsync() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/serviceprovider/__classPrefix__ServiceProvider.java start line: 37 end line: 63 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 397 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 154 end line: 166 size: 13 LOC McCabe index: 2 number of parameters: 0 id: 398 unit: public DisabledActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 109 end line: 121 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 399 unit: protected void removeJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 238 end line: 250 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 400 unit: public static Edit setAnnotationString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/AnnotationTools.java start line: 99 end line: 111 size: 13 LOC McCabe index: 2 number of parameters: 4 id: 401 unit: public static Collection getProcessorsWithActivityInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 520 end line: 540 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 402 unit: public static Collection getProcessorsWithActivityOutputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 542 end line: 562 size: 13 LOC McCabe index: 5 number of parameters: 2 id: 403 unit: private static synchronized Set getMethodsForClass() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 324 end line: 336 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 404 unit: public void notify() file: taverna-observer/src/main/java/org/apache/taverna/lang/observer/SwingAwareObserver.java start line: 33 end line: 46 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 405 unit: protected OntModel loadOntologyFromClasspath() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 223 end line: 239 size: 13 LOC McCabe index: 3 number of parameters: 2 id: 406 unit: private void loadCnt() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/TavernaProvModel.java start line: 62 end line: 77 size: 13 LOC McCabe index: 2 number of parameters: 0 id: 407 unit: protected synchronized void loadWfDesc() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 82 end line: 99 size: 13 LOC McCabe index: 2 number of parameters: 0 id: 408 unit: protected void deregisterNode() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 230 end line: 243 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 409 unit: public Edit getAddDispatchLayerEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 250 end line: 263 size: 13 LOC McCabe index: 1 number of parameters: 3 id: 410 unit: public Edit getConnectDatalinkEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 459 end line: 471 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 411 unit: public void putObject() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/CacheAspect.java start line: 104 end line: 125 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 412 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 689 end line: 701 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 413 unit: public static String getStackTraceElementString() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 411 end line: 423 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 414 unit: protected Dataflow createDataflow() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 173 end line: 189 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 415 unit: private void addControlLinks() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 486 end line: 498 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 416 unit: private void addInputPorts() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 513 end line: 525 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 417 unit: public W3ProvenanceExport() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 175 end line: 189 size: 13 LOC McCabe index: 2 number of parameters: 3 id: 418 unit: protected Literal timestampToLiteral() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 456 end line: 469 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 419 unit: private Path saveError() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 709 end line: 723 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 420 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 71 end line: 83 size: 13 LOC McCabe index: 1 number of parameters: 0 id: 421 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 106 end line: 118 size: 13 LOC McCabe index: 1 number of parameters: 0 id: 422 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 124 end line: 136 size: 13 LOC McCabe index: 1 number of parameters: 0 id: 423 unit: public synchronized void addProvenanceItem() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 350 end line: 373 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 424 unit: public void setAnnotationFile() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 160 end line: 173 size: 13 LOC McCabe index: 4 number of parameters: 1 id: 425 unit: private Blob serialize() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 246 end line: 259 size: 13 LOC McCabe index: 2 number of parameters: 1 id: 426 unit: public String getDataValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 786 end line: 799 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 427 unit: public Document recordsToCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1135 end line: 1153 size: 13 LOC McCabe index: 5 number of parameters: 1 id: 428 unit: public String getWorkflowIdForExternalName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1248 end line: 1262 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 429 unit: public boolean isTopLevelDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1362 end line: 1374 size: 13 LOC McCabe index: 3 number of parameters: 1 id: 430 unit: public List getPortsForProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1879 end line: 1892 size: 13 LOC McCabe index: 2 number of parameters: 2 id: 431 unit: public void addWFId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 196 end line: 209 size: 13 LOC McCabe index: 1 number of parameters: 4 id: 432 unit: public void addProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 250 end line: 263 size: 13 LOC McCabe index: 1 number of parameters: 1 id: 433 unit: public void clearDBStatic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 504 end line: 516 size: 13 LOC McCabe index: 2 number of parameters: 0 id: 434 unit: private boolean isParent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 281 end line: 303 size: 13 LOC McCabe index: 6 number of parameters: 2 id: 435 unit: public Dependencies fetchPortData() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 263 end line: 276 size: 13 LOC McCabe index: 2 number of parameters: 5 id: 436 unit: public Key getKeyPairsPrivateKey() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1360 end line: 1374 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 437 unit: public boolean isKeyEntry() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1568 end line: 1582 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 438 unit: public KeyStore loadPKCS12Keystore() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1722 end line: 1734 size: 12 LOC McCabe index: 2 number of parameters: 2 id: 439 unit: public Text getCurrentKey() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 91 end line: 104 size: 12 LOC McCabe index: 3 number of parameters: 0 id: 440 unit: protected Map getIndexesByProcess() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 102 end line: 113 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 441 unit: public void eventAdded() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 110 end line: 125 size: 12 LOC McCabe index: 2 number of parameters: 1 id: 442 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 105 end line: 117 size: 12 LOC McCabe index: 4 number of parameters: 1 id: 443 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 60 end line: 71 size: 12 LOC McCabe index: 3 number of parameters: 0 id: 444 unit: protected void addInput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 153 end line: 164 size: 12 LOC McCabe index: 2 number of parameters: 5 id: 445 unit: public void receiveError() file: 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getTheCredentialManagerDefaultDirectory() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 54 end line: 64 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 466 unit: public PrivateKey getPrivateKey() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2138 end line: 2151 size: 11 LOC McCabe index: 3 number of parameters: 1 id: 467 unit: private void loadDefaultSecurityFiles() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2426 end line: 2436 size: 11 LOC McCabe index: 4 number of parameters: 0 id: 468 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 244 end line: 254 size: 11 LOC McCabe index: 1 number of parameters: 3 id: 469 unit: public LoopConfiguration clone() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 63 end line: 73 size: 11 LOC McCabe index: 2 number of parameters: 0 id: 470 unit: public void receiveResult() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 154 end line: 164 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 471 unit: public void receiveResultCompletion() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 167 end line: 177 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 472 unit: protected Event() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 37 end line: 47 size: 11 LOC McCabe index: 4 number of parameters: 3 id: 473 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/WorkflowDataToken.java start line: 79 end line: 89 size: 11 LOC McCabe index: 2 number of parameters: 0 id: 474 unit: private void setMimeType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 237 end line: 247 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 475 unit: public DisabledActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 87 end line: 97 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 476 unit: protected List getJobsDefault() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 218 end line: 228 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 477 unit: public int 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file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 375 end line: 385 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 482 unit: public static Edit getRemoveProcessorInputPortEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 387 end line: 397 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 483 unit: public VisitReport() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 132 end line: 142 size: 11 LOC McCabe index: 1 number of parameters: 6 id: 484 unit: public Run() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 149 end line: 159 size: 11 LOC McCabe index: 1 number of parameters: 2 id: 485 unit: public void cancel() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 267 end line: 277 size: 11 LOC McCabe index: 4 number of parameters: 0 id: 486 unit: public void close() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 124 end line: 134 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 487 unit: private void initializeJenaFileManager() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 141 end line: 158 size: 11 LOC McCabe index: 2 number of parameters: 0 id: 488 unit: public Individual setEndedAtTime() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 337 end line: 347 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 489 unit: public Individual setStartedAtTime() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 366 end line: 376 size: 11 LOC McCabe index: 2 number of parameters: 2 id: 490 unit: public Individual setWasAssociatedWith() file: 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taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 51 end line: 61 size: 11 LOC McCabe index: 1 number of parameters: 0 id: 511 unit: protected String addOrderByToQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 152 end line: 164 size: 11 LOC McCabe index: 3 number of parameters: 3 id: 512 unit: public List runLineageQueries() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1116 end line: 1126 size: 11 LOC McCabe index: 4 number of parameters: 2 id: 513 unit: public WorkflowTree getWorkflowNestingStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1226 end line: 1238 size: 11 LOC McCabe index: 2 number of parameters: 1 id: 514 unit: public Set removeRun() file: 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file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2367 end line: 2377 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 519 unit: public CrossProductIterator() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 97 end line: 108 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 520 unit: public TextArrayWritable getCurrentValue() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 107 end line: 117 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 521 unit: public void setState() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 123 end line: 132 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 522 unit: public static synchronized boolean pauseWorkflow() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 132 end line: 141 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 523 unit: public Retry() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 80 end line: 89 size: 10 LOC McCabe index: 1 number of parameters: 4 id: 524 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 129 end line: 138 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 525 unit: private void checkConfig() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 155 end line: 164 size: 10 LOC McCabe index: 5 number of parameters: 1 id: 526 unit: public void finishedWith() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 198 end line: 208 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 527 unit: static file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.java start line: 60 end line: 69 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 528 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 123 end line: 133 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 529 unit: public void receiveJobQueue() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 136 end line: 146 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 530 unit: private Map getInData() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 228 end line: 237 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 531 unit: private Map getOutData() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 239 end line: 248 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 532 unit: public void actionPerformed() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/config/__classPrefix__ConfigureAction.java start line: 50 end line: 61 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 533 unit: public boolean checkValues() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/config/__classPrefix__ConfigurationPanel.java start line: 75 end line: 86 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 534 unit: public int getIterationDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 152 end line: 162 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 535 unit: public static ActivityInputPort getActivityInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 480 end line: 489 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 536 unit: public static OutputPort getActivityOutputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 491 end line: 500 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 537 unit: private void addReport() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 96 end line: 105 size: 10 LOC McCabe index: 6 number of parameters: 2 id: 538 unit: public void resume() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 256 end line: 265 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 539 unit: protected void checkNotNull() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 174 end line: 184 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 540 unit: public JsonNode getActivityConfigurationSchema() file: taverna-services-impl/src/main/java/org/apache/taverna/services/impl/ServiceRegistryImpl.java start line: 52 end line: 61 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 541 unit: public Set getActivityInputPorts() file: taverna-services-impl/src/main/java/org/apache/taverna/services/impl/ServiceRegistryImpl.java start line: 64 end line: 73 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 542 unit: public Set getActivityOutputPorts() file: taverna-services-impl/src/main/java/org/apache/taverna/services/impl/ServiceRegistryImpl.java start line: 76 end line: 85 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 543 unit: public void treeNodesInserted() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 315 end line: 324 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 544 unit: public void treeStructureChanged() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 326 end line: 335 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 545 unit: public void resolveAt() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractCrystalizer.java start line: 110 end line: 125 size: 10 LOC McCabe index: 2 number of parameters: 2 id: 546 unit: protected synchronized void removeDataflowInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 186 end line: 195 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 547 unit: protected synchronized void removeDataflowOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 265 end line: 274 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 548 unit: public ActivityInputPort createActivityInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 185 end line: 194 size: 10 LOC McCabe index: 1 number of parameters: 5 id: 549 unit: public Edit getCreateDataflowInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 327 end line: 336 size: 10 LOC McCabe index: 1 number of parameters: 4 id: 550 unit: public Edit getCreateDataflowOutputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 339 end line: 348 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 551 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 556 end line: 566 size: 10 LOC McCabe index: 3 number of parameters: 2 id: 552 unit: public Edit getAddAnnotationChainEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 659 end line: 670 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 553 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 811 end line: 825 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 554 unit: protected AbstractDataflowOutputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowOutputPortEdit.java start line: 36 end line: 45 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 555 unit: public ActivityOutputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/activity/impl/ActivityOutputPortImpl.java start line: 62 end line: 72 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 556 unit: protected AbstractDispatchLayerEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 37 end line: 46 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 557 unit: private void pushEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 62 end line: 71 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 558 unit: public synchronized T2Reference nextReferenceSetReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractT2ReferenceGenerator.java start line: 66 end line: 75 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 559 unit: public T2Reference nextListReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractT2ReferenceGenerator.java start line: 87 end line: 96 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 560 unit: public T2Reference nextErrorDocumentReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractT2ReferenceGenerator.java start line: 99 end line: 109 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 561 unit: public T2Reference register() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 135 end line: 144 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 562 unit: public float getPathCost() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 135 end line: 150 size: 10 LOC McCabe index: 4 number of parameters: 0 id: 563 unit: public synchronized void setLocalPart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 148 end line: 157 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 564 unit: Set getNeighbours() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 185 end line: 195 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 565 unit: private synchronized WorkflowToDataflowMapper getMapper() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 126 end line: 135 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 566 unit: public Object getProperty() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 125 end line: 134 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 567 unit: private String getPropertyName() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 149 end line: 158 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 568 unit: public String makePortURI() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 217 end line: 226 size: 10 LOC McCabe index: 3 number of parameters: 4 id: 569 unit: private Path referencePath() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 776 end line: 786 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 570 unit: public String writeGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 358 end line: 368 size: 10 LOC McCabe index: 2 number of parameters: 0 id: 571 unit: private void generateWFFromAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 247 end line: 258 size: 10 LOC McCabe index: 1 number of parameters: 1 id: 572 unit: private Port processProcessArtifactDep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 324 end line: 335 size: 10 LOC McCabe index: 1 number of parameters: 6 id: 573 unit: public static String iterationToString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceUtils.java start line: 40 end line: 49 size: 10 LOC McCabe index: 3 number of parameters: 1 id: 574 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/PortBinding.java start line: 60 end line: 69 size: 10 LOC McCabe index: 1 number of parameters: 0 id: 575 unit: public List getAllPortsInDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1853 end line: 1862 size: 10 LOC McCabe index: 2 number of parameters: 1 id: 576 unit: public void addWorkflowRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 211 end line: 221 size: 10 LOC McCabe index: 1 number of parameters: 2 id: 577 unit: public ProvenanceProcessor addProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 229 end line: 239 size: 10 LOC McCabe index: 1 number of parameters: 3 id: 578 unit: public ArrayList getServiceURLsforAllUsernameAndPasswordPairs() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 958 end line: 969 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 579 unit: public void deleteUsernameAndPasswordForService() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1114 end line: 1125 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 580 unit: public void deleteKeyPair() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1206 end line: 1225 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 581 unit: public void notify() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2524 end line: 2540 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 582 unit: private Text f() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/DotProductTest.java start line: 62 end line: 70 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 583 unit: public void map() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductTest.java start line: 43 end line: 53 size: 9 LOC McCabe index: 2 number of parameters: 3 id: 584 unit: public String getJDBCUri() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 227 end line: 235 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 585 unit: private String indexToString() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 296 end line: 304 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 586 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 68 end line: 76 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 587 unit: public static synchronized boolean cancelWorkflow() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 114 end line: 122 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 588 unit: protected InvokeCallBack() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 223 end line: 231 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 589 unit: public ConditionCallBack() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 263 end line: 271 size: 9 LOC McCabe index: 1 number of parameters: 1 id: 590 unit: public AbstractExecution() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecution.java start line: 68 end line: 76 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 591 unit: public Set getOutputPorts() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__ActivityFactory.java start line: 81 end line: 97 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 592 unit: private synchronized void printNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 49 end line: 57 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 593 unit: protected synchronized NamedNode nodeAt() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 121 end line: 129 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 594 unit: public synchronized void cut() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 136 end line: 144 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 595 unit: protected final String pushOwner() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 141 end line: 151 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 596 unit: protected final String getPushedOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/IterationInternalEvent.java start line: 72 end line: 80 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 597 unit: public void executeAsynch() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 87 end line: 95 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 598 unit: public DispatchErrorEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 53 end line: 61 size: 9 LOC McCabe index: 1 number of parameters: 7 id: 599 unit: public DispatchJobQueueEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobQueueEvent.java start line: 55 end line: 63 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 600 unit: protected final void pushJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 215 end line: 223 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 601 unit: public static String sanitiseName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 724 end line: 732 size: 9 LOC McCabe index: 5 number of parameters: 1 id: 602 unit: public final TargetType doEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 86 end line: 94 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 603 unit: public final void undo() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 113 end line: 121 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 604 unit: private static Set getLeafs() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 294 end line: 302 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 605 unit: public void pause() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 246 end line: 254 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 606 unit: public void save() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 137 end line: 145 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 607 unit: public void stateChanged() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 254 end line: 262 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 608 unit: public WorkflowReport load() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 136 end line: 144 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 609 unit: protected Map parseValues() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 250 end line: 258 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 610 unit: public void notify() file: taverna-observer/src/main/java/org/apache/taverna/lang/observer/MultiCaster.java start line: 59 end line: 68 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 611 unit: protected synchronized void loadDcTerms() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 70 end line: 79 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 612 unit: public List getEntities() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/invocation/impl/InvocationContextImpl.java start line: 53 end line: 61 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 613 unit: public void jobCreated() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorCrystalizerImpl.java start line: 60 end line: 68 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 614 unit: private int inputPortNameToIndex() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 111 end line: 119 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 615 unit: protected AbstractDataflowEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowEdit.java start line: 35 end line: 43 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 616 unit: protected AbstractActivityEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractActivityEdit.java start line: 36 end line: 44 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 617 unit: protected synchronized void addProcessor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 95 end line: 103 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 618 unit: protected synchronized void addMerge() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 118 end line: 126 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 619 unit: public synchronized void setImmutable() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 787 end line: 795 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 620 unit: public Edit getRenameProcessorEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 379 end line: 387 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 621 unit: public Edit getRenameDataflowInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 390 end line: 398 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 622 unit: public Edit getRenameDataflowOutputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 401 end line: 409 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 623 unit: public Edit getChangeDataflowInputPortDepthEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 412 end line: 420 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 624 unit: public Edit getChangeDataflowInputPortGranularDepthEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 423 end line: 431 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 625 unit: public Edit getUpdateDataflowNameEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 673 end line: 681 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 626 unit: public Edit getUpdateDataflowInternalIdentifierEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 684 end line: 692 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 627 unit: public Edit getRemoveDataflowInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 717 end line: 725 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 628 unit: public Edit getRemoveDataflowOutputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 728 end line: 736 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 629 unit: public Edit getRemoveProcessorEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 739 end line: 747 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 630 unit: public Edit getReorderMergeInputPortsEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1166 end line: 1174 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 631 unit: public Edit getRemoveActivityEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 1177 end line: 1185 size: 9 LOC McCabe index: 1 number of parameters: 2 id: 632 unit: protected AbstractAnnotationEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractAnnotationEdit.java start line: 36 end line: 44 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 633 unit: protected AbstractDataflowInputPortEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowInputPortEdit.java start line: 35 end line: 43 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 634 unit: protected AbstractDatalinkEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDatalinkEdit.java start line: 34 end line: 42 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 635 unit: protected AbstractProcessorEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractProcessorEdit.java start line: 35 end line: 43 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 636 unit: public final DispatchStack doEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 49 end line: 57 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 637 unit: public final void undo() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 87 end line: 95 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 638 unit: public synchronized void connectDefault() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 282 end line: 290 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 639 unit: private void notifyFacadeListeners() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 572 end line: 580 size: 9 LOC McCabe index: 3 number of parameters: 2 id: 640 unit: public boolean pauseWorkflowRun() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 605 end line: 613 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 641 unit: public boolean resumeWorkflowRun() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 616 end line: 624 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 642 unit: public IdentifiedList getList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ListServiceImpl.java start line: 43 end line: 51 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 643 unit: public ErrorDocument getError() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 42 end line: 50 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 644 unit: public T2Reference getChild() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 136 end line: 144 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 645 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ContextualizedT2ReferenceImpl.java start line: 50 end line: 58 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 646 unit: public int compareTo() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 218 end line: 226 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 647 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceListImpl.java start line: 64 end line: 72 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 648 unit: protected final void checkConverterRegistry() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 118 end line: 126 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 649 unit: public ReferenceSet getReferenceSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetServiceImpl.java start line: 50 end line: 58 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 650 unit: public int hashCode() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 246 end line: 254 size: 9 LOC McCabe index: 3 number of parameters: 0 id: 651 unit: private String printRefSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 301 end line: 309 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 652 unit: private DispatchLayerFactory getDispatchLayerFactory() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 102 end line: 110 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 653 unit: public RunProfile() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 82 end line: 90 size: 9 LOC McCabe index: 1 number of parameters: 5 id: 654 unit: private String toPath() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 342 end line: 350 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 655 unit: public String getProcessorId() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 368 end line: 376 size: 9 LOC McCabe index: 4 number of parameters: 1 id: 656 unit: private String indexToString() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 378 end line: 386 size: 9 LOC McCabe index: 3 number of parameters: 1 id: 657 unit: private Path getIntermediate() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 388 end line: 397 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 658 unit: private Path getPath() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 537 end line: 545 size: 9 LOC McCabe index: 3 number of parameters: 3 id: 659 unit: private void addDispatchLayer() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 281 end line: 291 size: 9 LOC McCabe index: 1 number of parameters: 4 id: 660 unit: public OPMManager() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 72 end line: 82 size: 9 LOC McCabe index: 1 number of parameters: 0 id: 661 unit: public String getDataflowInstance() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 526 end line: 534 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 662 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 93 end line: 101 size: 9 LOC McCabe index: 2 number of parameters: 0 id: 663 unit: public List getProcessors() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 807 end line: 815 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 664 unit: public List listRuns() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 302 end line: 310 size: 9 LOC McCabe index: 2 number of parameters: 2 id: 665 unit: public Map getDataBindings() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 685 end line: 693 size: 9 LOC McCabe index: 2 number of parameters: 1 id: 666 unit: public boolean hasUsernamePasswordForService() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2417 end line: 2424 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 667 unit: public boolean nextKeyValue() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 80 end line: 88 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 668 unit: public void write() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputSplit.java start line: 68 end line: 75 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 669 unit: public void readFields() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputSplit.java start line: 78 end line: 85 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 670 unit: private void setDerbyPaths() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 147 end line: 155 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 671 unit: public String getId() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 117 end line: 124 size: 8 LOC McCabe index: 4 number of parameters: 0 id: 672 unit: private Iterable forEach() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 146 end line: 153 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 673 unit: public static ObjectNode defaultConfig() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 166 end line: 173 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 674 unit: public static Object DeserializeParam() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 499 end line: 506 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 675 unit: public void receiveJobQueue() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 128 end line: 135 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 676 unit: private boolean arrayEquals() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 453 end line: 460 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 677 unit: public void finishedWith() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 178 end line: 188 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 678 unit: void incrementErrorsReflected() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 305 end line: 312 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 679 unit: void incrementErrorsTranslated() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 314 end line: 321 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 680 unit: public JsonNode getActivityConfigurationSchema() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivityFactory.java start line: 57 end line: 64 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 681 unit: protected abstract Execution createExecutionImpl() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionService.java start line: 93 end line: 101 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 682 unit: protected Execution getExecution() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionService.java start line: 129 end line: 136 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 683 unit: public JsonNode getActivityConfigurationSchema() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__ActivityFactory.java start line: 53 end line: 60 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 684 unit: public Set getInputPorts() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__ActivityFactory.java start line: 63 end line: 78 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 685 unit: public Configuration getActivityConfiguration() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/serviceprovider/__classPrefix__ServiceDesc.java start line: 73 end line: 80 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 686 unit: protected final String popOwner() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 119 end line: 128 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 687 unit: public abstract void configure() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 95 end line: 112 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 688 unit: private static boolean identicalIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 56 end line: 63 size: 8 LOC McCabe index: 4 number of parameters: 2 id: 689 unit: protected void forget() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 150 end line: 158 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 690 unit: public static String getAnnotationString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/AnnotationTools.java start line: 113 end line: 120 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 691 unit: public static String getUniqueMergeInputPortName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 502 end line: 509 size: 8 LOC McCabe index: 3 number of parameters: 3 id: 692 unit: public static Collection getProcessorsWithActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 511 end line: 518 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 693 unit: public static String uniqueProcessorName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 705 end line: 712 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 694 unit: public static String uniqueObjectName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 734 end line: 742 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 695 unit: protected abstract void doEditAction() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 96 end line: 105 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 696 unit: public static Object findAncestor() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 283 end line: 290 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 697 unit: public void start() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/Run.java start line: 237 end line: 244 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 698 unit: public void save() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 119 end line: 127 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 699 unit: private static Iterable iterate() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 260 end line: 267 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 700 unit: public InputStream openStream() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/BlueReference.java start line: 77 end line: 84 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 701 unit: public InputStream openStream() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 77 end line: 84 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 702 unit: public InputStream openStream() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/YellowReference.java start line: 78 end line: 85 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 703 unit: public InputStream openStream() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/GreenReference.java start line: 77 end line: 84 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 704 unit: public void addKeyPair() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 164 end line: 172 size: 8 LOC McCabe index: 1 number of parameters: 3 id: 705 unit: public Individual setWasGeneratedBy() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 402 end line: 410 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 706 unit: protected ProcessorInputPortImpl getInputPortWithName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 277 end line: 284 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 707 unit: protected ProcessorOutputPortImpl getOutputPortWithName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 286 end line: 293 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 708 unit: protected DataflowImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 77 end line: 84 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 709 unit: protected synchronized void removeDataflowInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 206 end line: 213 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 710 unit: protected synchronized void removeDataflowOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 285 end line: 292 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 711 unit: public void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 67 end line: 80 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 712 unit: public AbstractMergeEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractMergeEdit.java start line: 28 end line: 35 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 713 unit: public Edit getRenameMergeEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 369 end line: 376 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 714 unit: public Edit getRemoveMergeEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 750 end line: 757 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 715 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 848 end line: 860 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 716 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 883 end line: 890 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 717 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 913 end line: 920 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 718 unit: public DispatchLayer layerAbove() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 239 end line: 246 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 719 unit: public void receiveResultCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 289 end line: 296 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 720 unit: protected void configureFromXML() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 123 end line: 130 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 721 unit: public void receiveData() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 220 end line: 227 size: 8 LOC McCabe index: 1 number of parameters: 5 id: 722 unit: private NamedInputPortNode nodeForName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 261 end line: 268 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 723 unit: public void addStrategy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 90 end line: 97 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 724 unit: public void removeStrategy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 99 end line: 106 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 725 unit: public void addResultListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 245 end line: 252 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 726 unit: public void removeResultListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 351 end line: 358 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 727 unit: public void notify() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 418 end line: 431 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 728 unit: public String getTemporaryDerbyJDBC() file: taverna-reference-impl/src/main/java/org/apache/taverna/platform/spring/jdbc/TemporaryJDBC.java start line: 66 end line: 73 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 729 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ListServiceImpl.java start line: 120 end line: 127 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 730 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 147 end line: 154 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 731 unit: public Class getTargetType() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 244 end line: 251 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 732 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetServiceImpl.java start line: 137 end line: 144 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 733 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 91 end line: 99 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 734 unit: private T2ReferenceImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 68 end line: 75 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 735 unit: private ActivityFactory getActivityFactory() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 131 end line: 138 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 736 unit: public void addPropertiesToNode() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 313 end line: 320 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 737 unit: public StaticProperty() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/StaticProperty.java start line: 42 end line: 49 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 738 unit: public Saver() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 77 end line: 84 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 739 unit: public void saveData() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 130 end line: 142 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 740 unit: protected Object getProperty() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 273 end line: 280 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 741 unit: protected void prepareScufl2() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 191 end line: 198 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 742 unit: public JsonNode getActivityConfigurationSchema() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 55 end line: 62 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 743 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 89 end line: 96 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 744 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 255 end line: 262 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 745 unit: private boolean tryInit() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 94 end line: 101 size: 8 LOC McCabe index: 3 number of parameters: 0 id: 746 unit: public static String parentProcess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceUtils.java start line: 137 end line: 144 size: 8 LOC McCabe index: 3 number of parameters: 2 id: 747 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 31 end line: 39 size: 8 LOC McCabe index: 1 number of parameters: 0 id: 748 unit: public EventProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 176 end line: 185 size: 8 LOC McCabe index: 1 number of parameters: 4 id: 749 unit: public String processWorkflowStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 197 end line: 211 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 750 unit: private void makePortMapping() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 490 end line: 497 size: 8 LOC McCabe index: 3 number of parameters: 1 id: 751 unit: public List getInputPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 209 end line: 218 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 752 unit: public List getOutputPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 228 end line: 237 size: 8 LOC McCabe index: 1 number of parameters: 2 id: 753 unit: public List getProcessorsShallow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 689 end line: 696 size: 8 LOC McCabe index: 2 number of parameters: 2 id: 754 unit: private List getProcessorsShallow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 698 end line: 705 size: 8 LOC McCabe index: 2 number of parameters: 3 id: 755 unit: public void addWFId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 187 end line: 194 size: 8 LOC McCabe index: 1 number of parameters: 1 id: 756 unit: public void clearDD() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 627 end line: 634 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 757 unit: public String escape() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 51 end line: 58 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 758 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 101 end line: 108 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 759 unit: public List getWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 382 end line: 389 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 760 unit: public String getTopLevelWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 398 end line: 405 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 761 unit: public List getWorkflowsForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 408 end line: 415 size: 8 LOC McCabe index: 2 number of parameters: 1 id: 762 unit: public List getAllWorkflowIDs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 423 end line: 430 size: 8 LOC McCabe index: 2 number of parameters: 0 id: 763 unit: public String getMasterPassword() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DefaultMasterPasswordProvider.java start line: 58 end line: 64 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 764 unit: public CrossProduct() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 45 end line: 51 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 765 unit: public void initialize() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 50 end line: 56 size: 7 LOC McCabe index: 1 number of parameters: 2 id: 766 unit: public void map() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/DotProductTest.java start line: 44 end line: 50 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 767 unit: public void stopDerbyNetworkServer() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 103 end line: 109 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 768 unit: public String getDatabaseContext() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 89 end line: 95 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 769 unit: public int compareTo() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 287 end line: 294 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 770 unit: public Invocation getInvocation() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 364 end line: 371 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 771 unit: private void resumeLayerWorkflow() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 172 end line: 178 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 772 unit: public static String SerializeParam() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 490 end line: 496 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 773 unit: private static String getNextProcessID() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 84 end line: 90 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 774 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 120 end line: 126 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 775 unit: protected IntermediateProvenance findIntermediateProvenance() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 208 end line: 214 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 776 unit: public Properties getProperties() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 50 end line: 56 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 777 unit: private synchronized ErrorBounceState getState() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 91 end line: 97 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 778 unit: public String createExecution() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionService.java start line: 67 end line: 73 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 779 unit: public AbstractExecutionEnvironment() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionEnvironment.java start line: 35 end line: 41 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 780 unit: public void configure() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity/src/main/java/__classPrefix__Activity.java start line: 57 end line: 74 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 781 unit: protected Action createAction() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/menu/__classPrefix__ConfigureMenuAction.java start line: 53 end line: 59 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 782 unit: public synchronized String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 41 end line: 47 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 783 unit: public synchronized List jobsWithPrefix() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 150 end line: 156 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 784 unit: private synchronized void getJobsUnder() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 158 end line: 164 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 785 unit: public abstract EventType popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 83 end line: 108 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 786 unit: public void registerNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 288 end line: 294 size: 7 LOC McCabe index: 2 number of parameters: 3 id: 787 unit: public void setMimeTypes() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 96 end line: 102 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 788 unit: protected void addJobToStateList() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 160 end line: 166 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 789 unit: public DispatchJobEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobEvent.java start line: 53 end line: 59 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 790 unit: public DispatchResultEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchResultEvent.java start line: 57 end line: 63 size: 7 LOC McCabe index: 1 number of parameters: 5 id: 791 unit: public synchronized void remove() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 163 end line: 169 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 792 unit: public void removeFromParent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 172 end line: 178 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 793 unit: private boolean canClearCache() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 143 end line: 149 size: 7 LOC McCabe index: 4 number of parameters: 2 id: 794 unit: protected CompletionState getCompletionState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 123 end line: 129 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 795 unit: public static Processor getFirstProcessorWithActivityInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 671 end line: 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file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 340 end line: 346 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 801 unit: private void patchSubject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 118 end line: 124 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 802 unit: private void patchCheckTime() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 126 end line: 132 size: 7 LOC McCabe index: 3 number of parameters: 2 id: 803 unit: private void patchTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 142 end line: 148 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 804 unit: public TypedTreeModelEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TypedTreeModelEvent.java start line: 79 end line: 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McCabe index: 1 number of parameters: 0 id: 814 unit: public DataflowValidationReport checkValidity() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 482 end line: 489 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 815 unit: public List getEntities() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 647 end line: 653 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 816 unit: protected abstract void pushCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 153 end line: 176 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 817 unit: public final AnnotationAssertion applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractAnnotationEdit.java start line: 47 end line: 53 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 818 unit: public final T doEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditSupport.java start line: 32 end line: 38 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 819 unit: protected abstract void pushEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 80 end line: 126 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 820 unit: public void receiveResult() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 266 end line: 272 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 821 unit: public void receiveError() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 280 end line: 286 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 822 unit: public Class getSourceType() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 236 end line: 242 size: 7 LOC McCabe index: 3 number of parameters: 0 id: 823 unit: public String getLocalPart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 110 end line: 116 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 824 unit: public Set getDispatchLayerTypes() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 47 end line: 53 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 825 unit: public boolean dispatchLayerExists() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 56 end line: 62 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 826 unit: public UsernamePassword clone() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 34 end line: 40 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 827 unit: public Set getExecutionEnvironments() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 58 end line: 64 size: 7 LOC McCabe index: 2 number of parameters: 0 id: 828 unit: public Set getExecutionEnvironments() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 67 end line: 73 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 829 unit: private String getParentInvocationId() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 322 end line: 328 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 830 unit: private String getInvocationId() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 330 end line: 336 size: 7 LOC McCabe index: 3 number of parameters: 1 id: 831 unit: protected Execution createExecutionImpl() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 76 end line: 82 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 832 unit: public LocalExecutionEnvironment() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 46 end line: 52 size: 7 LOC McCabe index: 1 number of parameters: 3 id: 833 unit: private boolean seenReference() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 788 end line: 794 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 834 unit: public void createRole() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 189 end line: 195 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 835 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 60 end line: 66 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 836 unit: public static String getCreateTable() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 244 end line: 250 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 837 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 30 end line: 36 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 838 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 40 end line: 47 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 839 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 31 end line: 37 size: 7 LOC McCabe index: 1 number of parameters: 0 id: 840 unit: public Dependencies runLineageQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1108 end line: 1114 size: 7 LOC McCabe index: 2 number of parameters: 2 id: 841 unit: public String makeT2ReferenceURI() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 26 end line: 35 size: 7 LOC McCabe index: 1 number of parameters: 1 id: 842 unit: public String makeIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 64 end line: 71 size: 7 LOC McCabe index: 1 number of parameters: 4 id: 843 unit: private int getPosition() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 271 end line: 279 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 844 unit: public void removeWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 363 end line: 369 size: 7 LOC McCabe index: 2 number of parameters: 1 id: 845 unit: static URI resolveUriFragment() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 72 end line: 81 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 846 unit: public void addFragmentedURI() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 943 end line: 948 size: 6 LOC McCabe index: 3 number of parameters: 3 id: 847 unit: public void deleteUsernameAndPasswordForService() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1095 end line: 1103 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 848 unit: public MapWritable getCurrentValue() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 87 end line: 92 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 849 unit: public void reduce() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/DotProductTest.java start line: 54 end line: 60 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 850 unit: public CrossProductInputSplit() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputSplit.java start line: 50 end line: 57 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 851 unit: public TavernaInputSplit() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaInputSplit.java start line: 39 end line: 44 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 852 unit: public DataSource getDataSource() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 68 end line: 73 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 853 unit: public void outputAdded() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 340 end line: 345 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 854 unit: private String indexStr() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 246 end line: 251 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 855 unit: public AbstractExecutionService() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionService.java start line: 44 end line: 49 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 856 unit: public void noteConfiguration() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/config/__classPrefix__ConfigurationPanel.java start line: 92 end line: 99 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 857 unit: public int canProvideIconScore() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/serviceprovider/__classPrefix__ServiceIcon.java start line: 35 end line: 40 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 858 unit: public static Icon getIcon() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/serviceprovider/__classPrefix__ServiceIcon.java start line: 47 end line: 52 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 859 unit: public JComponent getMainFrame() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/view/__classPrefix__ContextualView.java start line: 65 end line: 70 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 860 unit: public synchronized void insertJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 114 end line: 119 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 861 unit: public void registerNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 220 end line: 225 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 862 unit: public RegisterNodeMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 362 end line: 367 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 863 unit: public Edits getEdits() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 84 end line: 89 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 864 unit: public final synchronized void clear() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 61 end line: 66 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 865 unit: protected boolean isComplete() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 73 end line: 78 size: 6 LOC McCabe index: 3 number of parameters: 0 id: 866 unit: public final void receiveCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 84 end line: 89 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 867 unit: public final void receiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 92 end line: 97 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 868 unit: public synchronized void insert() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/TerminalNode.java start line: 32 end line: 37 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 869 unit: public boolean equals() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/OrderedPair.java start line: 71 end line: 76 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 870 unit: private Run getRun() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 216 end line: 221 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 871 unit: private void postEvent() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 223 end line: 228 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 872 unit: private void injectContext() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 112 end line: 117 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 873 unit: public WorkflowReport load() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 129 end line: 134 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 874 unit: protected Date getDate() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/WorkflowReportJSON.java start line: 327 end line: 332 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 875 unit: public Individual createDictionary() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 194 end line: 199 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 876 unit: public void loadOntologies() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/TavernaProvModel.java start line: 80 end line: 86 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 877 unit: protected String printProcess() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 201 end line: 206 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 878 unit: public CompletionAwareTreeCache() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractCrystalizer.java start line: 103 end line: 108 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 879 unit: public AbstractBinaryProcessorEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractBinaryProcessorEdit.java start line: 39 end line: 44 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 880 unit: public void completionCreated() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorCrystalizerImpl.java start line: 52 end line: 57 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 881 unit: public final Dataflow applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowEdit.java start line: 46 end line: 51 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 882 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowEdit.java start line: 60 end line: 66 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 883 unit: public void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 96 end line: 101 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 884 unit: public final Activity applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractActivityEdit.java start line: 47 end line: 52 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 885 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractActivityEdit.java start line: 61 end line: 67 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 886 unit: private void filterAndAdd() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 655 end line: 660 size: 6 LOC McCabe index: 3 number of parameters: 3 id: 887 unit: public boolean isInputPortConnected() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 779 end line: 784 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 888 unit: public final Merge applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractMergeEdit.java start line: 38 end line: 43 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 889 unit: public MergeInputPort createMergeInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 120 end line: 125 size: 6 LOC McCabe index: 2 number of parameters: 3 id: 890 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractAnnotationEdit.java start line: 62 end line: 68 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 891 unit: public final DataflowInputPort applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowInputPortEdit.java start line: 46 end line: 51 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 892 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowInputPortEdit.java start line: 60 end line: 66 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 893 unit: public final Datalink applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDatalinkEdit.java start line: 45 end line: 50 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 894 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDatalinkEdit.java start line: 59 end line: 65 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 895 unit: public final Processor applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractProcessorEdit.java start line: 46 end line: 51 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 896 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractProcessorEdit.java start line: 60 end line: 66 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 897 unit: public final DataflowOutputPort applyEdit() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowOutputPortEdit.java start line: 48 end line: 53 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 898 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractDataflowOutputPortEdit.java start line: 62 end line: 68 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 899 unit: public final void undo() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditSupport.java start line: 52 end line: 57 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 900 unit: public DispatchLayer layerBelow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 253 end line: 258 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 901 unit: private void sendCachePurge() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 298 end line: 303 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 902 unit: public int getIterationDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 100 end line: 105 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 903 unit: public void receiveCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 229 end line: 234 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 904 unit: public Map getDesiredCardinalities() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 299 end line: 304 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 905 unit: public void receiveData() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 117 end line: 122 size: 6 LOC McCabe index: 2 number of parameters: 5 id: 906 unit: public void receiveCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 124 end line: 129 size: 6 LOC McCabe index: 2 number of parameters: 4 id: 907 unit: protected IterationStrategyImpl layerBelow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 137 end line: 142 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 908 unit: private boolean isProvenanceAlreadyAdded() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 218 end line: 223 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 909 unit: public AnnotationAssertionImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 49 end line: 54 size: 6 LOC McCabe index: 1 number of parameters: 4 id: 910 unit: public DisputeEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 34 end line: 39 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 911 unit: protected final void checkDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 80 end line: 85 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 912 unit: protected final void checkGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 93 end line: 98 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 913 unit: protected final void checkAugmentor() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 106 end line: 111 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 914 unit: public synchronized void deleteErrorDocumentsForWFRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.java start line: 59 end line: 64 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 915 unit: protected final void checkDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 67 end line: 72 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 916 unit: protected final void checkGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 80 end line: 85 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 917 unit: public synchronized void deleteReferenceSetsForWFRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 65 end line: 70 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 918 unit: public synchronized void deleteIdentifiedListsForWFRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryListDao.java start line: 62 end line: 67 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 919 unit: public Identified get() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/SimpleCacheProviderImpl.java start line: 43 end line: 48 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 920 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceServiceImpl.java start line: 681 end line: 686 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 921 unit: public WriteQueueAspect() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/WriteQueueAspect.java start line: 53 end line: 58 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 922 unit: protected final void checkGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractListServiceImpl.java start line: 76 end line: 81 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 923 unit: private void setPredecessor() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 454 end line: 459 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 924 unit: public Set getActivityTypes() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 43 end line: 48 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 925 unit: public boolean activityExists() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 51 end line: 56 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 926 unit: public String getProfileName() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 146 end line: 151 size: 6 LOC McCabe index: 3 number of parameters: 0 id: 927 unit: public LocalExecutionService() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 60 end line: 65 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 928 unit: public Set getExecutionEnvironments() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 68 end line: 73 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 929 unit: private URI getTavernaVersion() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 433 end line: 438 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 930 unit: protected void addMessageIfNonEmpty() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 769 end line: 774 size: 6 LOC McCabe index: 3 number of parameters: 2 id: 931 unit: public void setFileToT2Reference() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 812 end line: 817 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 932 unit: public String getExtraDescription() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivity.java start line: 111 end line: 116 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 933 unit: public ProvenanceAnalysis() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 87 end line: 92 size: 6 LOC McCabe index: 1 number of parameters: 1 id: 934 unit: public ProcessType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 36 end line: 41 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 935 unit: public IterationType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 34 end line: 39 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 936 unit: public PortType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 35 end line: 40 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 937 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 125 end line: 130 size: 6 LOC McCabe index: 2 number of parameters: 0 id: 938 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 41 end line: 46 size: 6 LOC McCabe index: 1 number of parameters: 0 id: 939 unit: private List processPortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1133 end line: 1142 size: 6 LOC McCabe index: 1 number of parameters: 6 id: 940 unit: public Q where() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 100 end line: 105 size: 6 LOC McCabe index: 2 number of parameters: 2 id: 941 unit: public Q where() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 107 end line: 112 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 942 unit: public Q orderBy() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 114 end line: 119 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 943 unit: public String getTopLevelWorkflowIdForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 278 end line: 283 size: 6 LOC McCabe index: 3 number of parameters: 1 id: 944 unit: public List getWorkflowIdsForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 291 end line: 296 size: 6 LOC McCabe index: 2 number of parameters: 1 id: 945 unit: public ProvenanceAccess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 89 end line: 94 size: 6 LOC McCabe index: 1 number of parameters: 2 id: 946 unit: public ProvenanceAccess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 96 end line: 101 size: 6 LOC McCabe index: 1 number of parameters: 3 id: 947 unit: public final URI setFragmentForURI() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 84 end line: 88 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 948 unit: public final URI setUserInfoForURI() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 91 end line: 95 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 949 unit: private static List getSpecialTrustedCertificates() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 214 end line: 221 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 950 unit: public boolean hasKeyPair() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1193 end line: 1200 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 951 unit: public void deleteTrustedCertificate() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1558 end line: 1562 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 952 unit: public void initializeSSL() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1927 end line: 1943 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 953 unit: public SSLSocketFactory getTavernaSSLSocketFactory() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2004 end line: 2008 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line: 48 end line: 52 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 975 unit: public NamedNode childAt() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 89 end line: 93 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 976 unit: public WorkflowDataToken() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/WorkflowDataToken.java start line: 42 end line: 46 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 977 unit: public WorkflowDataToken pushOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/WorkflowDataToken.java start line: 55 end line: 59 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 978 unit: public synchronized static MonitorManager getInstance() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 57 end line: 61 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 979 unit: 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DispatchErrorEvent popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 98 end line: 102 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 992 unit: public DispatchErrorEvent pushOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 105 end line: 109 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 993 unit: public DispatchJobQueueEvent pushOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobQueueEvent.java start line: 80 end line: 84 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 994 unit: public DispatchJobEvent popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobEvent.java start line: 85 end 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taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 86 end line: 90 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1003 unit: public Processor getProcessor() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 97 end line: 101 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1004 unit: public void remove() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 156 end line: 160 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1005 unit: public NamedInputPortNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 40 end line: 44 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1006 unit: public int getIterationDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 104 end line: 108 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1007 unit: protected CompletionState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CompletionHandlingAbstractIterationStrategyNode.java start line: 61 end line: 65 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1008 unit: public static boolean containsNestedWorkflow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 648 end line: 652 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1009 unit: public int hashCode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/OrderedPair.java start line: 79 end line: 83 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1010 unit: public VisitReport() file: 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line: 143 end line: 147 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1024 unit: public Individual setWasEnactedBy() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 149 end line: 153 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1025 unit: public Individual createWorkflow() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 172 end line: 176 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1026 unit: public Individual createProcess() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 177 end line: 181 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1027 unit: public Individual createArtifact() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 183 end line: 187 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1028 unit: public Individual setUsedInput() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 190 end line: 194 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1029 unit: public Individual setWasOutputFrom() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 196 end line: 200 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1030 unit: public Individual createInputParameter() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 202 end line: 206 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1031 unit: public Individual createOutputParameter() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 209 end line: 213 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1032 unit: public InvocationContextImpl() file: 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taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 181 end line: 185 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1037 unit: private List getListeners() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 80 end line: 84 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1038 unit: public BasicEventForwardingOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 48 end line: 52 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1039 unit: public MergeOutputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeOutputPortImpl.java start line: 29 end line: 33 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 1040 unit: public void setLocalName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 710 end line: 714 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1041 unit: public void fire() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 722 end line: 743 size: 5 LOC McCabe index: 2 number of parameters: 2 id: 1042 unit: void setIdentifier() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 772 end line: 776 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1043 unit: public boolean isSatisfied() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConditionImpl.java start line: 50 end line: 54 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1044 unit: public void setFilterDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 140 end line: 144 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1045 unit: protected ProcessorInputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorInputPortImpl.java start line: 42 end line: 46 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1046 unit: protected void pushCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorInputPortImpl.java start line: 54 end line: 58 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 1047 unit: protected void pushData() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorInputPortImpl.java start line: 61 end line: 65 size: 5 LOC McCabe index: 1 number of parameters: 5 id: 1048 unit: public ProcessorOutputPort createProcessorOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 128 end line: 132 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 1049 unit: public ProcessorInputPort createProcessorInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 135 end line: 139 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1050 unit: public Processor createProcessor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 170 end line: 174 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1051 unit: public ActivityOutputPort createActivityOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 200 end line: 204 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1052 unit: public WorkflowInstanceFacade createWorkflowInstanceFacade() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 207 end line: 211 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1053 unit: protected DatalinkImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 46 end line: 50 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1054 unit: protected ProcessorOutputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorOutputPortImpl.java start line: 39 end line: 43 size: 5 LOC McCabe index: 1 number of parameters: 4 id: 1055 unit: public int removeLayer() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 219 end line: 223 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1056 unit: protected abstract void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 66 end line: 74 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1057 unit: public void addInput() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 236 end line: 240 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1058 unit: public void removeInput() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 242 end line: 246 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1059 unit: private ArrayList copyList() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 344 end line: 348 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1060 unit: public AnnotationAssertionImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 42 end line: 47 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1061 unit: public void deleteIdentifiedListsForWorkflowRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ListServiceImpl.java start line: 130 end line: 134 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1062 unit: public final String getInternalId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractEntityImpl.java start line: 60 end line: 64 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1063 unit: public void put() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/SimpleCacheProviderImpl.java start line: 51 end line: 55 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1064 unit: private void checkUndefinedId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 55 end line: 59 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1065 unit: public void deleteErrorDocumentsForWorkflowRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentServiceImpl.java start line: 157 end line: 161 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1066 unit: public void deleteReferenceSetsForWorkflowRun() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetServiceImpl.java start line: 147 end line: 151 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1067 unit: protected final void checkDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractListServiceImpl.java start line: 64 end line: 68 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1068 unit: public static T2ReferenceImpl getAsImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 77 end line: 81 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1069 unit: public JsonNode getActivityConfigurationSchema() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 59 end line: 63 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1070 unit: public JsonNode getDispatchLayerConfigurationSchema() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 65 end line: 69 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1071 unit: public void resetPassword() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 66 end line: 70 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1072 unit: public int compare() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.java start line: 105 end line: 109 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1073 unit: public String getWorkflowName() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 120 end line: 124 size: 5 LOC McCabe index: 3 number of parameters: 0 id: 1074 unit: public void cancel() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 183 end line: 187 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1075 unit: public void addProperties() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 52 end line: 56 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1076 unit: public void saveProperties() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 58 end line: 62 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1077 unit: public Set getPropertyKeys() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 118 end line: 122 size: 5 LOC McCabe index: 2 number of parameters: 0 id: 1078 unit: public String makeWorkflowURI() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 204 end line: 208 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1079 unit: public String makeWorkflowBundleURI() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 210 end line: 215 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1080 unit: public String makeProcessExecution() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 234 end line: 238 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1081 unit: public Set getOutputPorts() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 70 end line: 74 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1082 unit: public void createAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 101 end line: 105 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1083 unit: public void setGenerateOPMGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1185 end line: 1189 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1084 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 29 end line: 33 size: 5 LOC McCabe index: 1 number of parameters: 0 id: 1085 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 44 end line: 48 size: 5 LOC McCabe index: 3 number of parameters: 0 id: 1086 unit: public List getProcessorEnactments() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 1605 end line: 1609 size: 5 LOC McCabe index: 1 number of parameters: 2 id: 1087 unit: public Provenance() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 72 end line: 76 size: 5 LOC McCabe index: 1 number of parameters: 1 id: 1088 unit: public String makePortURI() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 45 end line: 49 size: 5 LOC McCabe index: 2 number of parameters: 4 id: 1089 unit: public void setReferenceService() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 193 end line: 197 size: 5 LOC McCabe index: 2 number of parameters: 1 id: 1090 unit: public ProcessorEnactment getProcessorEnactmentByProcessId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 662 end line: 666 size: 5 LOC McCabe index: 1 number of parameters: 3 id: 1091 unit: public CredentialManagerAuthenticator() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerAuthenticator.java start line: 50 end line: 53 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1092 unit: public void setApplicationConfiguration() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DefaultMasterPasswordProvider.java start line: 52 end line: 55 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1093 unit: public final Path getCredentialManagerDefaultDirectory() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 67 end line: 70 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1094 unit: public void deleteKeyPair() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1232 end line: 1235 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1095 unit: public boolean hasTrustedCertificate() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1519 end line: 1525 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1096 unit: public boolean confirmMasterPassword() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1819 end line: 1825 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1097 unit: public String chooseServerAlias() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2099 end line: 2103 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1098 unit: public void setMasterPasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2568 end line: 2571 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1099 unit: public void setJavaTruststorePasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2592 end line: 2595 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1100 unit: public void setServiceUsernameAndPasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2613 end line: 2616 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1101 unit: public void setTrustConfirmationProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2634 end line: 2637 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1102 unit: public void setApplicationConfiguration() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2657 end line: 2660 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1103 unit: public CrossProduct() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 40 end line: 43 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1104 unit: public void addIterable() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 58 end line: 61 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1105 unit: public void remove() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 110 end line: 116 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1106 unit: public boolean hasNext() file: taverna-execution-hadoop/src/main/java/org/pingel/util/CrossProduct.java start line: 118 end line: 121 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1107 unit: public boolean nextKeyValue() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 76 end line: 79 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1108 unit: public static void main() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/DotProductTest.java start line: 101 end line: 104 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1109 unit: public RecordReader createRecordReader() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputFormat.java start line: 64 end line: 67 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1110 unit: public static void main() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductTest.java start line: 111 end line: 114 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1111 unit: protected void setup() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaMapper.java start line: 37 end line: 40 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1112 unit: public static void main() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/Test.java start line: 64 end line: 67 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1113 unit: public RecordReader createRecordReader() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaInputFormat.java start line: 41 end line: 44 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1114 unit: protected void setup() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaReducer.java start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1115 unit: public void setStartedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 254 end line: 257 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1116 unit: public void setCompletedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 276 end line: 279 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1117 unit: private static void spaces() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 164 end line: 167 size: 4 LOC McCabe index: 2 number of parameters: 2 id: 1118 unit: public StatusReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 68 end line: 71 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1119 unit: public void setCreatedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 149 end line: 152 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1120 unit: public void setCancelledDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 240 end line: 243 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1121 unit: public void setCompletedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 262 end line: 265 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1122 unit: public void setFailedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 283 end line: 286 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1123 unit: public Retry() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 75 end line: 78 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1124 unit: public Invoke() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 92 end line: 95 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1125 unit: public Parallelize() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 104 end line: 107 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1126 unit: public void receiveJob() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 137 end line: 140 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1127 unit: protected StateModel() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 332 end line: 335 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1128 unit: public ParallelizeConfig() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ParallelizeConfig.java start line: 36 end line: 39 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1129 unit: public void receiveError() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 125 end line: 128 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1130 unit: public void delete() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecutionService.java start line: 104 end line: 107 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1131 unit: public String getViewTitle() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/view/__classPrefix__ContextualView.java start line: 73 end line: 76 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1132 unit: public Action getConfigureAction() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/view/__classPrefix__ContextualView.java start line: 100 end line: 103 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1133 unit: public List getViews() file: taverna-activity-archetype/src/main/resources/archetype-resources/__rootArtifactId__-activity-ui/src/main/java/ui/view/__classPrefix__ActivityContextViewFactory.java start line: 51 end line: 54 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1134 unit: public RemoteExecutionService() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecutionService.java start line: 42 end line: 45 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1135 unit: public RemoteExecution() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 41 end line: 45 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 1136 unit: public Completion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 44 end line: 47 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1137 unit: public Completion popIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 90 end line: 93 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1138 unit: public Completion pushOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 101 end line: 104 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1139 unit: public synchronized Job get() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 182 end line: 185 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1140 unit: public WorkflowDataToken popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/WorkflowDataToken.java start line: 49 end line: 52 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1141 unit: protected IterationInternalEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/IterationInternalEvent.java start line: 45 end line: 48 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1142 unit: public void registerNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 184 end line: 187 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1143 unit: List getEntities() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/Dataflow.java start line: 81 end line: 94 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1144 unit: public VisitReport visit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/UnrecognizedActivityHealthChecker.java start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1145 unit: public VisitReport visit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/DisabledActivityHealthChecker.java start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1146 unit: public void setHandledReferenceSchemes() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityInputPortDefinitionBean.java start line: 46 end line: 49 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1147 unit: public void setInputPortDefinitions() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortsDefinitionBean.java start line: 66 end line: 69 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1148 unit: public void setOutputPortDefinitions() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortsDefinitionBean.java start line: 77 end line: 80 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1149 unit: protected void addOutput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 180 end line: 183 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1150 unit: public Job popIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1151 unit: public Job pushOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 125 end line: 128 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1152 unit: private DisabledActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 53 end line: 56 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1153 unit: public void configure() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 124 end line: 127 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1154 unit: public void receiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 115 end line: 118 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1155 unit: public void receiveResult() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 125 end line: 128 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1156 unit: public void receiveResultCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 135 end line: 138 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1157 unit: public DispatchCompletionEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchCompletionEvent.java start line: 44 end line: 47 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1158 unit: public DispatchCompletionEvent popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchCompletionEvent.java start line: 50 end line: 53 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1159 unit: protected AbstractDispatchEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/AbstractDispatchEvent.java start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1160 unit: public DispatchJobQueueEvent popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobQueueEvent.java start line: 74 end line: 77 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1161 unit: protected final void pushCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 207 end line: 210 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1162 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 111 end line: 114 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1163 unit: public static Edit addAnnotation() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/AnnotationTools.java start line: 46 end line: 49 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1164 unit: private static Dataflow getNestedWorkflow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/Tools.java start line: 658 end line: 661 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1165 unit: protected AbstractPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/AbstractPort.java start line: 34 end line: 37 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1166 unit: public ProcessorFinishedEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ProcessorFinishedEvent.java start line: 33 end line: 36 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1167 unit: protected AbstractAnnotationEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 79 end line: 82 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1168 unit: private static Set getMethods() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 311 end line: 314 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1169 unit: public void setActivityProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessorProvenanceItem.java start line: 39 end line: 42 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1170 unit: public void setParentIterationItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 103 end line: 106 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1171 unit: public void setProcessorProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 55 end line: 58 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1172 unit: public void setIterationProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ActivityProvenanceItem.java start line: 39 end line: 42 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1173 unit: public static TreeModel untypedView() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TreeModelAdapter.java start line: 72 end line: 75 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1174 unit: public ExternalReferenceConstructionException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ExternalReferenceConstructionException.java start line: 45 end line: 48 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1175 unit: public void start() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 162 end line: 165 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1176 unit: public void pause() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 168 end line: 171 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1177 unit: public void resume() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 174 end line: 177 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1178 unit: public void cancel() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 180 end line: 183 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1179 unit: public String getRunName() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 211 end line: 214 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1180 unit: public void setEmptyDictionary() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/ProvModel.java start line: 324 end line: 327 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1181 unit: public Individual createTavernaEngine() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/TavernaProvModel.java start line: 57 end line: 60 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1182 unit: public void addSubProcess() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 159 end line: 164 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1183 unit: public void setDescribedByParameter() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 215 end line: 218 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1184 unit: protected MonitorTreeModel() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 95 end line: 99 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1185 unit: public void reorderInputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 223 end line: 227 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1186 unit: void setDepths() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 58 end line: 61 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1187 unit: public void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 74 end line: 77 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1188 unit: public void sendEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 67 end line: 70 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1189 unit: protected void addOutgoingLink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 72 end line: 75 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1190 unit: public FailureTransmitter getFailureTransmitter() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 746 end line: 749 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1191 unit: public boolean doTypeCheck() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 752 end line: 755 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1192 unit: public String recordIdentifier() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 767 end line: 770 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1193 unit: protected ConditionImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConditionImpl.java start line: 34 end line: 37 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1194 unit: void setDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 47 end line: 50 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1195 unit: void setGranularDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 52 end line: 55 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1196 unit: public void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 88 end line: 91 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1197 unit: protected AbstractFilteringInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 42 end line: 45 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1198 unit: public Datalink createDatalink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 102 end line: 105 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1199 unit: public DataflowInputPort createDataflowInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 108 end line: 111 size: 4 LOC McCabe index: 1 number of parameters: 4 id: 1200 unit: public DataflowOutputPort createDataflowOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 114 end line: 117 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1201 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 596 end line: 599 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1202 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 610 end line: 613 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1203 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 624 end line: 627 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1204 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 638 end line: 641 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1205 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 651 end line: 654 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1206 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 870 end line: 873 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1207 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 900 end line: 903 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1208 unit: protected MergeInputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeInputPortImpl.java start line: 30 end line: 33 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1209 unit: protected void applyUndo() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditSupport.java start line: 61 end line: 64 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1210 unit: public String toString() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 63 end line: 66 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1211 unit: public ActivityOutputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/activity/impl/ActivityOutputPortImpl.java start line: 48 end line: 51 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1212 unit: public void addLayer() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 209 end line: 212 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1213 unit: public void addLayer() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 214 end line: 217 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1214 unit: public int getIterationDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 293 end line: 296 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1215 unit: public FacadeResultListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 363 end line: 366 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1216 unit: public synchronized ErrorDocument get() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.java start line: 42 end line: 45 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1217 unit: public synchronized boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.java start line: 53 end line: 56 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1218 unit: public final ErrorDocument registerError() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 108 end line: 111 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1219 unit: public final ErrorDocument registerError() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 114 end line: 117 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1220 unit: public final void setCacheProvider() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/CacheAspect.java start line: 51 end line: 54 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1221 unit: public synchronized ReferenceSet get() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 44 end line: 47 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1222 unit: public synchronized IdentifiedList get() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryListDao.java start line: 44 end line: 47 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1223 unit: public synchronized void store() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryListDao.java start line: 50 end line: 53 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1224 unit: public boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryListDao.java start line: 56 end line: 59 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1225 unit: public IdentifiedArrayList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 40 end line: 43 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1226 unit: public IdentifiedArrayList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 45 end line: 48 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1227 unit: public IdentifiedArrayList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 50 end line: 53 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1228 unit: public boolean add() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 62 end line: 65 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1229 unit: public void add() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 68 end line: 71 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1230 unit: public boolean addAll() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 74 end line: 77 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1231 unit: public boolean addAll() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 80 end line: 83 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1232 unit: public void clear() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 86 end line: 89 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1233 unit: public boolean remove() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 200 end line: 203 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1234 unit: public T remove() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 206 end line: 209 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1235 unit: public boolean removeAll() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 212 end line: 215 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1236 unit: public boolean retainAll() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 218 end line: 221 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1237 unit: public T set() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 224 end line: 227 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1238 unit: public ContextualizedT2ReferenceImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ContextualizedT2ReferenceImpl.java start line: 34 end line: 37 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1239 unit: public void setTranslators() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 257 end line: 260 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1240 unit: public final void setConverters() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 60 end line: 63 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1241 unit: public final void setValueBuilders() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 69 end line: 72 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1242 unit: public final ErrorDocumentService getErrorDocumentService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 129 end line: 132 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1243 unit: public final ListService getListService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 135 end line: 138 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1244 unit: public final ReferenceSetService getReferenceSetService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 141 end line: 144 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1245 unit: private void setShortestDistance() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 440 end line: 443 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1246 unit: private float getShortestDistance() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 445 end line: 448 size: 4 LOC McCabe index: 2 number of parameters: 1 id: 1247 unit: public void setDispatchLayerFactories() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/dispatch/impl/DispatchLayerServiceImpl.java start line: 97 end line: 100 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1248 unit: public UsernamePassword() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 45 end line: 48 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1249 unit: public void setPassword() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 72 end line: 75 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1250 unit: public RunProfile() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 55 end line: 58 size: 4 LOC McCabe index: 1 number of parameters: 3 id: 1251 unit: public void setExecutionEnvironment() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 210 end line: 213 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1252 unit: public Dataflow getDataflow() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 138 end line: 141 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1253 unit: public synchronized Dataflow getDataflow() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 144 end line: 147 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1254 unit: public ProcessorReport createProcessorReport() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 195 end line: 198 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1255 unit: public ActivityReport createActivityReport() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 201 end line: 204 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1256 unit: public JsonNode getActivityConfigurationSchema() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 65 end line: 68 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1257 unit: public JsonNode getDispatchLayerConfigurationSchema() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 81 end line: 84 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1258 unit: public Processor getWorkflowProcessor() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 153 end line: 156 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1259 unit: public Activity getWorkflowActivity() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 163 end line: 166 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1260 unit: public LocalProcessorReport() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalProcessorReport.java start line: 47 end line: 50 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1261 unit: private static Path tempFile() file: taverna-prov/src/main/java/org/apache/taverna/prov/SafeFileOutputStream.java start line: 76 end line: 79 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1262 unit: public void rollback() file: taverna-prov/src/main/java/org/apache/taverna/prov/SafeFileOutputStream.java start line: 132 end line: 135 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1263 unit: public void configure() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivity.java start line: 59 end line: 65 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1264 unit: public List computeLineage() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 521 end line: 524 size: 4 LOC McCabe index: 1 number of parameters: 5 id: 1265 unit: public List getWorkflowRunsForWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 192 end line: 195 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1266 unit: public void setValidPaths() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1100 end line: 1103 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1267 unit: public ProcessorType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 34 end line: 37 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1268 unit: public DataDocumentType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 34 end line: 37 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1269 unit: public ActivityType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 36 end line: 39 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1270 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 35 end line: 38 size: 4 LOC McCabe index: 2 number of parameters: 0 id: 1271 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DDRecord.java start line: 39 end line: 42 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1272 unit: private Port lookupPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 499 end line: 502 size: 4 LOC McCabe index: 2 number of parameters: 3 id: 1273 unit: public Connection getConnection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 83 end line: 86 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1274 unit: public void clearDB() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 78 end line: 81 size: 4 LOC McCabe index: 1 number of parameters: 0 id: 1275 unit: public void acceptRawProvenanceEvent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 134 end line: 137 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1276 unit: public QueryAnswer executeQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 237 end line: 240 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1277 unit: public List getPortBindings() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 452 end line: 455 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1278 unit: public List getPortsForProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 490 end line: 493 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1279 unit: public WorkflowTree getWorkflowNestingStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 502 end line: 505 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1280 unit: public List getProcessorsForWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 593 end line: 596 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1281 unit: public void setProvenanceConnector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 618 end line: 621 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1282 unit: public List getProcessorEnactments() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 656 end line: 659 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1283 unit: public ProvenanceProcessor getProvenanceProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 674 end line: 677 size: 4 LOC McCabe index: 1 number of parameters: 2 id: 1284 unit: public DataflowInvocation getDataflowInvocation() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 701 end line: 704 size: 4 LOC McCabe index: 1 number of parameters: 1 id: 1285 unit: public void setCredentialManager() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerAuthenticator.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1286 unit: public int getProviderPriority() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DefaultMasterPasswordProvider.java start line: 41 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1287 unit: public String getCN() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 230 end line: 232 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1288 unit: public String getEmailAddress() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 235 end line: 237 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1289 unit: public String getOU() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 240 end line: 242 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1290 unit: public String getO() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 245 end line: 247 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1291 unit: public String getL() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 250 end line: 252 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1292 unit: public String getST() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 255 end line: 257 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1293 unit: public String getC() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/ParsedDistinguishedNameImpl.java start line: 260 end line: 262 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1294 unit: public ParsedDistinguishedNameImpl parseDN() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 171 end line: 173 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1295 unit: public void installAuthenticator() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 226 end line: 228 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1296 unit: public CredentialManagerImpl() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 288 end line: 307 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1297 unit: public void addObserver() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1740 end line: 1742 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1298 unit: public void removeObserver() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 1756 end line: 1758 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1299 unit: public Authenticator getAuthenticator() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2011 end line: 2013 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1300 unit: public void checkClientTrusted() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2235 end line: 2237 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1301 unit: public List getMasterPasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2582 end line: 2584 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1302 unit: public List getJavaTruststorePasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2604 end line: 2606 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1303 unit: public List getServiceUsernameAndPasswordProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2624 end line: 2626 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1304 unit: public List getTrustConfirmationProviders() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/CredentialManagerImpl.java start line: 2647 end line: 2649 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1305 unit: public LongWritable getCurrentKey() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 82 end line: 84 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1306 unit: public float getProgress() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 95 end line: 97 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 1307 unit: public TextArrayWritable() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TextArrayWritable.java start line: 26 end line: 28 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1308 unit: public float getProgress() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 120 end line: 123 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1309 unit: protected boolean isSplitable() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputFormat.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1310 unit: public void addInputPortDirectory() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputSplit.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1311 unit: public List getInputPortDirectories() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductInputSplit.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1312 unit: protected boolean isSplitable() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaInputFormat.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1313 unit: protected void reduce() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaReducer.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 1314 unit: public Map getInputs() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaInputSplit.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1315 unit: public long getLength() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaInputSplit.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1316 unit: public Connection getConnection() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1317 unit: public void setDatabaseConfiguration() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 162 end line: 164 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1318 unit: public void setApplicationConfiguration() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseManagerImpl.java start line: 171 end line: 173 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1319 unit: public DatabaseConfigurationImpl() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1320 unit: public boolean isAutoSave() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1321 unit: public void enableAutoSave() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1322 unit: public void disableAutoSave() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1323 unit: public boolean isInMemory() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1324 unit: public void setInMemory() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1325 unit: public boolean isExposeDatanature() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1326 unit: public void setExposeDatanature() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1327 unit: public void setPort() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1328 unit: public void setPort() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1329 unit: public void setDriverClassName() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1330 unit: public String getDriverClassName() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 113 end line: 115 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1331 unit: public boolean isProvenanceEnabled() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1332 unit: public void setProvenanceEnabled() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 123 end line: 125 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1333 unit: public void setStartInternalDerbyServer() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 128 end line: 130 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1334 unit: public boolean getStartInternalDerbyServer() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 133 end line: 135 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1335 unit: public int getPort() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 138 end line: 140 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1336 unit: public void setCurrentPort() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 143 end line: 145 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1337 unit: public int getCurrentPort() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 148 end line: 150 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1338 unit: public int getPoolMaxActive() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 153 end line: 155 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1339 unit: public int getPoolMinIdle() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 158 end line: 160 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1340 unit: public int getPoolMaxIdle() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 163 end line: 165 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1341 unit: public String getCategory() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 168 end line: 170 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1342 unit: public String getHibernateDialect() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 202 end line: 204 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1343 unit: public String getDisplayName() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 207 end line: 209 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1344 unit: public String getFilePrefix() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 212 end line: 214 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1345 unit: public String getUUID() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 217 end line: 219 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1346 unit: public String getConnectorType() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 222 end line: 224 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1347 unit: public void setJDBCUri() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 238 end line: 240 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1348 unit: public String getUsername() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 243 end line: 245 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1349 unit: public String getPassword() file: taverna-database-configuration-impl/src/main/java/org/apache/taverna/configuration/database/impl/DatabaseConfigurationImpl.java start line: 248 end line: 250 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1350 unit: public ConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ConfigurationException.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1351 unit: public ConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ConfigurationException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1352 unit: public ConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ConfigurationException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1353 unit: public ConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ConfigurationException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1354 unit: public ActivityConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityConfigurationException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1355 unit: public ActivityConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityConfigurationException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1356 unit: public ActivityConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityConfigurationException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1357 unit: public ActivityConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityConfigurationException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1358 unit: public DispatchLayerConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerConfigurationException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1359 unit: public DispatchLayerConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerConfigurationException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1360 unit: public DispatchLayerConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerConfigurationException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1361 unit: public DispatchLayerConfigurationException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerConfigurationException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1362 unit: public ActivityNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityNotFoundException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1363 unit: public ActivityNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityNotFoundException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1364 unit: public ActivityNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityNotFoundException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1365 unit: public ActivityNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/ActivityNotFoundException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1366 unit: public DispatchLayerNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerNotFoundException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1367 unit: public DispatchLayerNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerNotFoundException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1368 unit: public DispatchLayerNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerNotFoundException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1369 unit: public DispatchLayerNotFoundException() file: taverna-capability-api/src/main/java/org/apache/taverna/platform/capability/api/DispatchLayerNotFoundException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1370 unit: public Invocation() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 3 id: 1371 unit: public String getName() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1372 unit: public StatusReport getReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 127 end line: 129 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1373 unit: public Invocation getParent() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 139 end line: 141 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1374 unit: public SortedSet getInvocations() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 158 end line: 160 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1375 unit: public SortedMap getInputs() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 170 end line: 172 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1376 unit: public void setInputs() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 180 end line: 182 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1377 unit: public void setInput() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 190 end line: 192 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1378 unit: public SortedMap getOutputs() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 202 end line: 204 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1379 unit: public void setOutputs() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 212 end line: 214 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1380 unit: public void setOutput() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 222 end line: 224 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1381 unit: public State getState() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 233 end line: 235 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1382 unit: public Date getStartedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 244 end line: 246 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1383 unit: public Date getCompletedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 266 end line: 268 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1384 unit: public String toString() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/Invocation.java start line: 282 end line: 284 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1385 unit: public ActivityReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ActivityReport.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1386 unit: public WorkflowReport getNestedWorkflowReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ActivityReport.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1387 unit: public void setNestedWorkflowReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ActivityReport.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1388 unit: public WorkflowReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1389 unit: public Set getProcessorReports() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1390 unit: public void addProcessorReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1391 unit: public Bundle getDataBundle() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1392 unit: public void setDataBundle() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/WorkflowReport.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1393 unit: public ProcessorReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1394 unit: public void addActivityReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1395 unit: public Set getActivityReports() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1396 unit: public int getJobsCompleted() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1397 unit: public int getJobsCompletedWithErrors() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1398 unit: public int getJobsQueued() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1399 unit: public int getJobsStarted() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 101 end line: 103 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1400 unit: public Object getProperty() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 105 end line: 107 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1401 unit: public Set getPropertyKeys() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1402 unit: public void setJobsCompleted() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1403 unit: public void setJobsCompletedWithErrors() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 128 end line: 130 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1404 unit: public void setJobsQueued() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 137 end line: 139 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1405 unit: public void setJobsStarted() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/ProcessorReport.java start line: 146 end line: 148 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1406 unit: public SUBJECT getSubject() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1407 unit: public URI getSubjectURI() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1408 unit: public PARENT getParentReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 96 end line: 98 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1409 unit: public void setParentReport() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1410 unit: public State getState() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1411 unit: public Date getCreatedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 139 end line: 141 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1412 unit: public Date getStartedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 161 end line: 163 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1413 unit: public Date getPausedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 184 end line: 186 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1414 unit: public Date getResumedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 207 end line: 209 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1415 unit: public Date getCancelledDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 230 end line: 232 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1416 unit: public Date getCompletedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 252 end line: 254 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1417 unit: public Date getFailedDate() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 273 end line: 275 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1418 unit: public List getPausedDates() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 295 end line: 297 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1419 unit: public List getResumedDates() file: taverna-report-api/src/main/java/org/apache/taverna/platform/report/StatusReport.java start line: 306 end line: 308 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1420 unit: protected JobState getStateObject() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1421 unit: public FailoverState() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1422 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1423 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1424 unit: public void receiveJobQueue() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1425 unit: public float getBackoffFactor() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1426 unit: public int getInitialDelay() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1427 unit: public int getMaxDelay() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1428 unit: public int getMaxRetries() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1429 unit: public void setBackoffFactor() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1430 unit: public void setInitialDelay() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1431 unit: public void setMaxDelay() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1432 unit: public void setMaxRetries() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/RetryConfig.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1433 unit: public RetryState() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1434 unit: protected JobState getStateObject() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 124 end line: 126 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1435 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Retry.java start line: 176 end line: 178 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1436 unit: public void finishedWith() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1437 unit: public String getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1438 unit: private static String uuid() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 281 end line: 283 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1439 unit: public void receiveJobQueue() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 400 end line: 402 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1440 unit: public void receiveResultCompletion() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 460 end line: 462 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1441 unit: public void setReporter() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 471 end line: 473 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1442 unit: public ProvenanceReporter getReporter() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 475 end line: 477 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1443 unit: public void setWorkflow() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 485 end line: 487 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1444 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1445 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 234 end line: 236 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1446 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 239 end line: 241 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1447 unit: public InvocationContext getContext() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 257 end line: 259 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1448 unit: public String getParentProcessIdentifier() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 262 end line: 264 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1449 unit: public void setProperties() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1450 unit: public Activity getCondition() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 75 end line: 77 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1451 unit: public void setCondition() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1452 unit: public void setRunFirst() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/LoopConfiguration.java start line: 91 end line: 93 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1453 unit: public Parallelize() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1454 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 211 end line: 213 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1455 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 216 end line: 218 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1456 unit: Integer queueSize() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Parallelize.java start line: 337 end line: 339 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1457 unit: public JsonNode getDispatchLayerConfigurationSchema() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.java start line: 93 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1458 unit: public Set getDispatchLayerTypes() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/CoreDispatchLayerFactory.java start line: 99 end line: 101 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1459 unit: public void setMaximumJobs() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ParallelizeConfig.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1460 unit: public int getMaximumJobs() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ParallelizeConfig.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1461 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1462 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1463 unit: private Activity getCondition() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 148 end line: 151 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1464 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 274 end line: 276 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1465 unit: public void fail() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 279 end line: 281 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1466 unit: public InvocationContext getContext() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 301 end line: 303 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1467 unit: public String getParentProcessIdentifier() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 306 end line: 308 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1468 unit: public JsonNode getConfiguration() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 172 end line: 175 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1469 unit: int getErrorsReflected() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 293 end line: 295 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1470 unit: int getErrorsTranslated() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 301 end line: 303 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1471 unit: public void configure() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivity.java start line: 60 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1472 unit: public JsonNode getConfiguration() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivity.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1473 unit: public Dataflow getNestedDataflow() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivity.java start line: 158 end line: 160 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1474 unit: public void setNestedDataflow() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivity.java start line: 163 end line: 165 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1475 unit: public boolean canVisit() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivityHealthChecker.java start line: 29 end line: 31 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1476 unit: public VisitReport visit() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivityHealthChecker.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1477 unit: public boolean isTimeConsuming() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivityHealthChecker.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1478 unit: public URI getActivityType() file: taverna-dataflow-activity/src/main/java/org/apache/taverna/activities/dataflow/DataflowActivityFactory.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1479 unit: public Set getInputPorts() file: 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taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidWorkflowException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1484 unit: public InvalidWorkflowException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidWorkflowException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1485 unit: public InvalidWorkflowException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidWorkflowException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1486 unit: public InvalidExecutionIdException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidExecutionIdException.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1487 unit: public InvalidExecutionIdException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidExecutionIdException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1488 unit: public InvalidExecutionIdException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidExecutionIdException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1489 unit: public InvalidExecutionIdException() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/InvalidExecutionIdException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1490 unit: public String getID() file: taverna-execution-api/src/main/java/org/apache/taverna/platform/execution/api/AbstractExecution.java start line: 109 end line: 111 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1491 unit: public WorkflowBundle getWorkflowBundle() file: 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taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecutionService.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1539 unit: protected WorkflowReport createWorkflowReport() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 48 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1540 unit: protected ProcessorReport createProcessorReport() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 54 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1541 unit: protected ActivityReport createActivityReport() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 60 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1542 unit: public Completion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1543 unit: public Completion pushIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1544 unit: public Completion popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Completion.java start line: 96 end line: 98 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1545 unit: public void insertJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1546 unit: public int getIndexLength() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 104 end line: 106 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1547 unit: public synchronized boolean containsLocation() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TreeCache.java start line: 172 end line: 174 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1548 unit: public ProcessIdentifierException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/ProcessIdentifierException.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1549 unit: public ProcessIdentifierException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/ProcessIdentifierException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1550 unit: public ProcessIdentifierException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/ProcessIdentifierException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1551 unit: public ProcessIdentifierException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/ProcessIdentifierException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1552 unit: public final boolean isFinal() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1553 unit: public final String getOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1554 unit: public final InvocationContext getContext() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/Event.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1555 unit: public TokenOrderException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TokenOrderException.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1556 unit: public TokenOrderException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TokenOrderException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1557 unit: public TokenOrderException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TokenOrderException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1558 unit: public TokenOrderException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/TokenOrderException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1559 unit: public T2Reference getData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/invocation/WorkflowDataToken.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1560 unit: public NoSuchPropertyException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/NoSuchPropertyException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1561 unit: public NoSuchPropertyException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/NoSuchPropertyException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1562 unit: public NoSuchPropertyException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/NoSuchPropertyException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1563 unit: public NoSuchPropertyException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/NoSuchPropertyException.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1564 unit: protected synchronized static void setInstance() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1565 unit: public void addObserver() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1566 unit: public void deregisterNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 127 end line: 129 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1567 unit: public void deregisterNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 146 end line: 148 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1568 unit: public void registerNode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 253 end line: 255 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1569 unit: public void removeObserver() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 300 end line: 302 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1570 unit: public DeregisterNodeMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 330 end line: 332 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1571 unit: public MonitorMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 343 end line: 345 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1572 unit: public Object getWorkflowObject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 373 end line: 375 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1573 unit: public ConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ConfigurationException.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1574 unit: public ConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ConfigurationException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1575 unit: public ConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ConfigurationException.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1576 unit: public ConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ConfigurationException.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1577 unit: public CompoundEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/CompoundEdit.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1578 unit: public CompoundEdit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/CompoundEdit.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1579 unit: public Object getSubject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/CompoundEdit.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1580 unit: public boolean isApplied() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/CompoundEdit.java start line: 111 end line: 113 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1581 unit: public DataflowValidationReport getDataflowValidationReport() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/InvalidDataflowException.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1582 unit: public Dataflow getDataflow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/InvalidDataflowException.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1583 unit: public int getGranularDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/AbstractOutputPort.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1584 unit: public EditException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/EditException.java start line: 29 end line: 31 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1585 unit: public EditException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/EditException.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1586 unit: public EditException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/EditException.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1587 unit: public DeserializationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/serialization/DeserializationException.java start line: 23 end line: 25 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1588 unit: public DeserializationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/serialization/DeserializationException.java start line: 27 end line: 29 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1589 unit: public SerializationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/serialization/SerializationException.java start line: 23 end line: 25 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1590 unit: public SerializationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/serialization/SerializationException.java start line: 27 end line: 29 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1591 unit: public boolean canVisit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/UnrecognizedActivityHealthChecker.java start line: 43 end line: 45 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 1592 unit: public boolean isTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/UnrecognizedActivityHealthChecker.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1593 unit: public boolean canVisit() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/DisabledActivityHealthChecker.java start line: 43 end line: 45 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 1594 unit: public boolean isTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/DisabledActivityHealthChecker.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1595 unit: public static HealthCheck getInstance() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/HealthCheck.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1596 unit: public static int getTimeoutInSeconds() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1597 unit: public static void setTimeoutInSeconds() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1598 unit: public static long getEndpointExpiryInMilliseconds() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1599 unit: public static void setEndpointExpiryInMilliseconds() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1600 unit: public static void clearCachedEndpointStatus() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1601 unit: public boolean isTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/health/RemoteHealthChecker.java start line: 232 end line: 234 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1602 unit: public String getName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1603 unit: public void setName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1604 unit: public int getDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1605 unit: public void setDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1606 unit: public void setMimeTypes() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortDefinitionBean.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1607 unit: public Class getTranslatedElementType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityInputPortDefinitionBean.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1608 unit: public void setTranslatedElementType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityInputPortDefinitionBean.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1609 unit: public boolean getAllowsLiteralValues() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityInputPortDefinitionBean.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1610 unit: public void setAllowsLiteralValues() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityInputPortDefinitionBean.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1611 unit: public List getInputPortDefinitions() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortsDefinitionBean.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1612 unit: public List getOutputPortDefinitions() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityPortsDefinitionBean.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1613 unit: public int getGranularDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityOutputPortDefinitionBean.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1614 unit: public void setGranularDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/config/ActivityOutputPortDefinitionBean.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1615 unit: public ActivityConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityConfigurationException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1616 unit: public ActivityConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityConfigurationException.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1617 unit: public ActivityConfigurationException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityConfigurationException.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1618 unit: public final Set getInputPorts() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1619 unit: public final Map getOutputPortMapping() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1620 unit: public final Set getOutputPorts() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 140 end line: 142 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1621 unit: protected void addOutput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 194 end line: 196 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1622 unit: protected void removeOutputs() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 252 end line: 254 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1623 unit: protected void removeInputs() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/AbstractActivity.java start line: 260 end line: 262 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1624 unit: public Job pushIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1625 unit: public Map getData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1626 unit: public Job popOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/Job.java start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1627 unit: public ActivityAndBeanWrapper getConfiguration() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1628 unit: public Activity getActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 137 end line: 139 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1629 unit: public Object getActivityConfiguration() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 144 end line: 146 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1630 unit: public boolean configurationWouldWork() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 148 end line: 150 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1631 unit: public Object getLastWorkingConfiguration() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/DisabledActivity.java start line: 187 end line: 189 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1632 unit: private UnrecognizedActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/UnrecognizedActivity.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1633 unit: public void configure() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/UnrecognizedActivity.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1634 unit: public Element getConfiguration() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/UnrecognizedActivity.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1635 unit: protected NonExecutableActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1636 unit: public void addProxyInput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1637 unit: public void addProxyInput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1638 unit: public void addProxyOutput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1639 unit: public void addProxyOutput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/NonExecutableActivity.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1640 unit: public Activity getActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1641 unit: public void setActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1642 unit: public Object getBean() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1643 unit: public void setBean() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1644 unit: public String getName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1645 unit: public void setName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/activity/ActivityAndBeanWrapper.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1646 unit: protected AbstractErrorHandlerLayer() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1647 unit: protected JobState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractErrorHandlerLayer.java start line: 263 end line: 265 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1648 unit: public DispatchMessageType getMessageType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchCompletionEvent.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1649 unit: public DispatchErrorType getFailureType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1650 unit: public Activity getFailedActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1651 unit: public Throwable getCause() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1652 unit: public String getMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1653 unit: public DispatchMessageType getMessageType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchErrorEvent.java start line: 115 end line: 117 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1654 unit: public DispatchMessageType getMessageType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobQueueEvent.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1655 unit: public Map getData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobEvent.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1656 unit: public DispatchMessageType getMessageType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchJobEvent.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1657 unit: public boolean isStreamingEvent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchResultEvent.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1658 unit: public Map getData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchResultEvent.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1659 unit: public DispatchMessageType getMessageType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/events/DispatchResultEvent.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1660 unit: public void setDispatchStack() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1661 unit: protected final DispatchLayer getAbove() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1662 unit: protected final DispatchLayer getBelow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1663 unit: public final synchronized Enumeration children() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1664 unit: public boolean getAllowsChildren() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1665 unit: public final synchronized IterationStrategyNode getChildAt() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1666 unit: public final int getChildCount() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1667 unit: public final synchronized List getChildren() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 96 end line: 98 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1668 unit: public final synchronized int getIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 104 end line: 106 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1669 unit: public final IterationStrategyNode getParent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 112 end line: 114 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1670 unit: public synchronized void insert() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 117 end line: 119 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1671 unit: public boolean isLeaf() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 151 end line: 153 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1672 unit: public void setUserObject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/AbstractIterationStrategyNode.java start line: 200 end line: 202 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1673 unit: public IterationTypeMismatchException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/IterationTypeMismatchException.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1674 unit: public IterationTypeMismatchException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/IterationTypeMismatchException.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1675 unit: public IterationTypeMismatchException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/IterationTypeMismatchException.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1676 unit: public IterationTypeMismatchException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/IterationTypeMismatchException.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1677 unit: protected final void cleanUp() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 132 end line: 134 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1678 unit: public void receiveJob() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1679 unit: public void receiveCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1680 unit: public String getPortName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1681 unit: public int getCardinality() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1682 unit: public boolean isLeaf() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1683 unit: public boolean getAllowsChildren() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/NamedInputPortNode.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1684 unit: protected synchronized final void cleanUp() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/PrefixDotProduct.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1685 unit: public void innerReceiveCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/DotProduct.java start line: 94 end line: 101 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1686 unit: protected void cleanUp() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/DotProduct.java start line: 104 end line: 106 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1687 unit: public MissingIterationInputException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1688 unit: public MissingIterationInputException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1689 unit: public MissingIterationInputException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1690 unit: public MissingIterationInputException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/MissingIterationInputException.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1691 unit: public int compare() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/NamedWorkflowEntityComparator.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1692 unit: public int compare() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/utils/PortComparator.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1693 unit: public T getA() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/OrderedPair.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1694 unit: public T getB() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/OrderedPair.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1695 unit: public int getDepth() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/AbstractPort.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1696 unit: public final String getName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/AbstractPort.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1697 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/AbstractPort.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1698 unit: public void setOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ProcessorFinishedEvent.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1699 unit: public String getOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ProcessorFinishedEvent.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1700 unit: public void setProcessor() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ProcessorFinishedEvent.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1701 unit: public Processor getProcessor() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/ProcessorFinishedEvent.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1702 unit: public WorkflowStructureException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/WorkflowStructureException.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1703 unit: public NamingException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/NamingException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1704 unit: public NamingException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/NamingException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1705 unit: public NamingException() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/NamingException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1706 unit: public WorkflowRunCancellation() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/facade/WorkflowRunCancellation.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1707 unit: public String getCancelledWorkflowRunId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/facade/WorkflowRunCancellation.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1708 unit: public String getIdentification() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/IdentificationAssertion.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1709 unit: public void setIdentification() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/IdentificationAssertion.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1710 unit: public NumericType getUpperNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericRangeAssertion.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1711 unit: public void setUpperNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericRangeAssertion.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1712 unit: public NumericType getLowerNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericRangeAssertion.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1713 unit: public void setLowerNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericRangeAssertion.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1714 unit: public NumericType getNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericValueAssertion.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1715 unit: public void setNumericValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericValueAssertion.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1716 unit: public String getMimeType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/SemanticAnnotation.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1717 unit: public void setMimeType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/SemanticAnnotation.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1718 unit: public void setContent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/SemanticAnnotation.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1719 unit: public String getContent() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/SemanticAnnotation.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1720 unit: public HostInstitution() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/HostInstitution.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1721 unit: public String getText() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractTextualValueAssertion.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1722 unit: public void setText() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractTextualValueAssertion.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1723 unit: public MimeType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/MimeType.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1724 unit: public String getText() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/MimeType.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1725 unit: public URL getDocumentationURL() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/DocumentationUrl.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1726 unit: public void setDocumentationURL() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/DocumentationUrl.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1727 unit: public final Set getAnnotations() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1728 unit: public final void setAnnotations() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1729 unit: public final boolean isApplied() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/AbstractAnnotatedThing.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1730 unit: public boolean wasTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1731 unit: public void setWasTimeConsuming() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1732 unit: public int getResultId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 160 end line: 162 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1733 unit: public void setResultId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 167 end line: 169 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1734 unit: public String getMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 174 end line: 176 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1735 unit: public void setMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 184 end line: 186 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1736 unit: public void setStatus() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 210 end line: 212 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1737 unit: public Object getSubject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 217 end line: 219 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1738 unit: public void setSubject() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 225 end line: 227 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1739 unit: public Collection getSubReports() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 235 end line: 237 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1740 unit: public void setSubReports() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 245 end line: 247 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1741 unit: public VisitKind getKind() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 253 end line: 255 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1742 unit: public void setKind() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 260 end line: 262 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1743 unit: public void setProperty() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 264 end line: 266 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1744 unit: public Object getProperty() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 268 end line: 270 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1745 unit: public Map getProperties() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 272 end line: 274 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1746 unit: public void setCheckTime() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 292 end line: 294 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1747 unit: public long getCheckTime() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 296 end line: 298 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1748 unit: public HierarchyTraverser() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/HierarchyTraverser.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1749 unit: public static DataflowCollation getInstance() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/DataflowCollation.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1750 unit: public ActivityProvenanceItem getActivityProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessorProvenanceItem.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1751 unit: public String getProcessorID() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessorProvenanceItem.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1752 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessorProvenanceItem.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1753 unit: public IterationProvenanceItem getParentIterationItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1754 unit: public Timestamp getEnactmentEnded() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1755 unit: public Timestamp getEnactmentStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1756 unit: public ErrorProvenanceItem getErrorItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1757 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1758 unit: public InputDataProvenanceItem getInputDataItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1759 unit: public OutputDataProvenanceItem getOutputDataItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 75 end line: 77 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1760 unit: public void setEnactmentEnded() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1761 unit: public void setEnactmentStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1762 unit: public void setErrorItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1763 unit: public void setInputDataItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 91 end line: 93 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1764 unit: public void setIteration() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1765 unit: public void setOutputDataItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/IterationProvenanceItem.java start line: 99 end line: 101 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1766 unit: public final Date getInvocationStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1767 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1768 unit: public void setActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1769 unit: public Activity getActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1770 unit: public void setInvocationProcessId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1771 unit: public String getInvocationProcessId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1772 unit: public void setInvocationStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InvocationStartedProvenanceItem.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1773 unit: public Timestamp getInvocationEnded() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataflowRunComplete.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1774 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataflowRunComplete.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1775 unit: public void setInvocationEnded() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataflowRunComplete.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1776 unit: public void setState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataflowRunComplete.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1777 unit: public State getState() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataflowRunComplete.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1778 unit: public boolean isInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1779 unit: public void setInputPort() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1780 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1781 unit: public void setPortName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1782 unit: public String getPortName() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1783 unit: public void setData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1784 unit: public T2Reference getData() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1785 unit: public void setReferenceService() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1786 unit: public ReferenceService getReferenceService() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1787 unit: public void setIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1788 unit: public void setFinal() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1789 unit: public boolean isFinal() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1790 unit: public final String getIdentifier() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1791 unit: public int hashCode() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 36 end line: 38 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 1792 unit: public final void setIdentifier() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1793 unit: public final String getParentId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1794 unit: public final void setParentId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1795 unit: public final String getProcessId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1796 unit: public final void setProcessId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1797 unit: public final String getWorkflowId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1798 unit: public final void setWorkflowId() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1799 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/AbstractProvenanceItem.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1800 unit: public Map getDataMap() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataProvenanceItem.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1801 unit: public void setDataMap() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataProvenanceItem.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1802 unit: public void setReferenceService() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataProvenanceItem.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1803 unit: public ReferenceService getReferenceService() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/DataProvenanceItem.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1804 unit: protected boolean isInput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InputDataProvenanceItem.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1805 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/InputDataProvenanceItem.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1806 unit: public String getFacadeID() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1807 unit: public ProcessorProvenanceItem getProcessorProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1808 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1809 unit: public String getOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1810 unit: public void setOwningProcess() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1811 unit: public void setFacadeID() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1812 unit: public void setDataflowID() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1813 unit: public String getDataflowID() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ProcessProvenanceItem.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1814 unit: public Timestamp getInvocationStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1815 unit: public Dataflow getDataflow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1816 unit: public void setDataflow() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1817 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1818 unit: public void setIndex() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1819 unit: public boolean isFinal() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1820 unit: public void setFinal() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1821 unit: public void setInvocationStarted() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1822 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1823 unit: public Throwable getCause() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1824 unit: public void setCause() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1825 unit: public String getMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1826 unit: public void setMessage() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1827 unit: public String getErrorType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1828 unit: public void setErrorType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1829 unit: protected boolean isInput() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/OutputDataProvenanceItem.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1830 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/OutputDataProvenanceItem.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1831 unit: public IterationProvenanceItem getIterationProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ActivityProvenanceItem.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1832 unit: public SharedVocabulary getEventType() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ActivityProvenanceItem.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1833 unit: public Activity getActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ActivityProvenanceItem.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1834 unit: public void setActivity() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ActivityProvenanceItem.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1835 unit: public Object getSource() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TypedTreeModelEvent.java start line: 129 end line: 131 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1836 unit: public TreePath getTreePath() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TypedTreeModelEvent.java start line: 139 end line: 141 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1837 unit: public String toString() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TypedTreeModelEvent.java start line: 147 end line: 149 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1838 unit: public ExternalReferenceConstructionException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ExternalReferenceConstructionException.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1839 unit: public ExternalReferenceConstructionException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ExternalReferenceConstructionException.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1840 unit: public ExternalReferenceConstructionException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ExternalReferenceConstructionException.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1841 unit: public ReferenceServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceServiceException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1842 unit: public ReferenceServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceServiceException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1843 unit: public ReferenceServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceServiceException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1844 unit: public WorkflowRunIdEntity() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/WorkflowRunIdEntity.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1845 unit: public void setWorkflowRunId() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/WorkflowRunIdEntity.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1846 unit: public String getWorkflowRunId() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/WorkflowRunIdEntity.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1847 unit: public ListServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ListServiceException.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1848 unit: public ListServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ListServiceException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1849 unit: public ListServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ListServiceException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1850 unit: public ListServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ListServiceException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1851 unit: public final void setPrimaryKey() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/AbstractExternalReference.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1852 unit: public final int getPrimaryKey() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/AbstractExternalReference.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1853 unit: public ReferencedDataNature getDataNature() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/AbstractExternalReference.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1854 unit: public String getCharset() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/AbstractExternalReference.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1855 unit: public float getResolutionCost() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/AbstractExternalReference.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1856 unit: public DereferenceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/DereferenceException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1857 unit: public DereferenceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/DereferenceException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1858 unit: public DereferenceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/DereferenceException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1859 unit: public ErrorDocumentServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ErrorDocumentServiceException.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1860 unit: public ErrorDocumentServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ErrorDocumentServiceException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1861 unit: public ErrorDocumentServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ErrorDocumentServiceException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1862 unit: public ErrorDocumentServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ErrorDocumentServiceException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1863 unit: public ReferenceSetServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceSetServiceException.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1864 unit: public ReferenceSetServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceSetServiceException.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1865 unit: public ReferenceSetServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceSetServiceException.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1866 unit: public DaoException() file: 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start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1922 unit: public ReferencedDataNature getDataNature() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1923 unit: public String getCharset() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 106 end line: 108 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1924 unit: public String toString() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 114 end line: 116 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1925 unit: public Long getApproximateSizeInBytes() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of 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number of parameters: 1 id: 1960 unit: public void setDescribedByWorkflow() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 155 end line: 157 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1961 unit: public void setDescribedByProcess() file: taverna-prov-owl-bindings/src/main/java/org/apache/taverna/prov/owl/WfprovModel.java start line: 167 end line: 169 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 1962 unit: public Set getActivityTypes() file: taverna-services-impl/src/main/java/org/apache/taverna/services/impl/ServiceRegistryImpl.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1963 unit: public void setActivityService() file: taverna-services-impl/src/main/java/org/apache/taverna/services/impl/ServiceRegistryImpl.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1964 unit: public ReferenceService getReferenceService() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/invocation/impl/InvocationContextImpl.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1965 unit: public ProvenanceReporter getProvenanceReporter() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/invocation/impl/InvocationContextImpl.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1966 unit: public void addEntity() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/invocation/impl/InvocationContextImpl.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1967 unit: public void removeEntity() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/invocation/impl/InvocationContextImpl.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1968 unit: public JTree getJTree() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 106 end line: 108 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1969 unit: public void setNodeRemovalDelay() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 140 end line: 142 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1970 unit: public void addMonitorableProperty() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 354 end line: 356 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1971 unit: public void expire() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 358 end line: 360 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1972 unit: public Date getCreationDate() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 363 end line: 365 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1973 unit: public Object getWorkflowObject() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 381 end line: 383 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1974 unit: public boolean hasExpired() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 386 end line: 388 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1975 unit: public long getNodeRemovalDelay() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 415 end line: 417 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1976 unit: protected DefaultTreeModel getMonitorTree() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/monitor/impl/MonitorTreeModel.java start line: 419 end line: 421 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1977 unit: public final OrderedPair getSubject() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractBinaryProcessorEdit.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1978 unit: public final Configurable getSubject() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConfigureEdit.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1979 unit: public List getPreconditionList() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 305 end line: 307 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1980 unit: public List getControlledPreconditionList() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 310 end line: 312 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1981 unit: public DispatchStackImpl getDispatchStack() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 315 end line: 317 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1982 unit: public IterationStrategyStackImpl getIterationStrategy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 320 end line: 322 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1983 unit: public List getInputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 325 end line: 327 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1984 unit: public List getOutputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 330 end line: 332 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1985 unit: protected void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 339 end line: 341 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1986 unit: public String getLocalName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 344 end line: 346 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1987 unit: public void addObserver() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 407 end line: 409 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1988 unit: public void removeObserver() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 417 end line: 419 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1989 unit: public String toString() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorImpl.java start line: 422 end line: 424 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1990 unit: protected ProcessorCrystalizerImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorCrystalizerImpl.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1991 unit: public String getLocalName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1992 unit: protected void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1993 unit: public void addInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1994 unit: public void removeInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 1995 unit: public List getInputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1996 unit: public EventForwardingOutputPort getOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1997 unit: public String toString() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeImpl.java start line: 230 end line: 232 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1998 unit: public EventHandlingInputPort getInternalInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 1999 unit: public Dataflow getDataflow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2000 unit: public void addResultListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2001 unit: public void removeResultListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2002 unit: public int getDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowOutputPortImpl.java start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2003 unit: public final Set getOutgoingLinks() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2004 unit: protected void removeOutgoingLink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2005 unit: protected void setDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2006 unit: protected void setGranularDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2007 unit: protected void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/BasicEventForwardingOutputPort.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2008 unit: public Merge getMerge() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeOutputPortImpl.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2009 unit: protected synchronized void removeProcessor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 105 end line: 107 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2010 unit: protected synchronized void removeMerge() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 128 end line: 130 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2011 unit: public synchronized List getInputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 405 end line: 407 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2012 unit: public synchronized List getProcessors() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 443 end line: 445 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2013 unit: public synchronized List getMerges() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 451 end line: 453 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2014 unit: public synchronized List getOutputPorts() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 459 end line: 461 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2015 unit: public String getLocalName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 467 end line: 469 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2016 unit: public String toString() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 717 end line: 719 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2017 unit: public void refreshInternalIdentifier() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 757 end line: 759 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2018 unit: public String getIdentifier() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowImpl.java start line: 762 end line: 764 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2019 unit: public ProcessorImpl getControl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConditionImpl.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2020 unit: public ProcessorImpl getTarget() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConditionImpl.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2021 unit: protected void satisfy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ConditionImpl.java start line: 56 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2022 unit: public int getGranularInputDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2023 unit: public EventForwardingOutputPort getInternalOutputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2024 unit: public Dataflow getDataflow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowInputPortImpl.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2025 unit: public int getFilterDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2026 unit: public void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractFilteringInputPort.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2027 unit: public final Object getSubject() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractMergeEdit.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2028 unit: public String transformOwningProcess() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorInputPortImpl.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2029 unit: public Processor getProcessor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorInputPortImpl.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2030 unit: public Dataflow createDataflow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2031 unit: public AnnotationChain createAnnotationChain() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 142 end line: 144 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2032 unit: public IterationStrategy createIterationStrategy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 177 end line: 179 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2033 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 798 end line: 800 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2034 unit: protected void doEditAction() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditsImpl.java start line: 835 end line: 837 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2035 unit: public List getFailedEntities() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2036 unit: public Map getInvalidDataflows() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2037 unit: public List getUnresolvedOutputs() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 75 end line: 77 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2038 unit: public List getUnsatisfiedEntities() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2039 unit: public boolean isValid() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2040 unit: public boolean isWorkflowIncomplete() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DataflowValidationReportImpl.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2041 unit: public void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeInputPortImpl.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2042 unit: public Merge getMerge() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/MergeInputPortImpl.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2043 unit: public final boolean isApplied() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/EditSupport.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2044 unit: public int getResolvedDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2045 unit: protected void setResolvedDepth() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2046 unit: public EventHandlingInputPort getSink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2047 unit: public EventForwardingOutputPort getSource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/DatalinkImpl.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2048 unit: protected void receiveEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorOutputPortImpl.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2049 unit: public Processor getProcessor() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/ProcessorOutputPortImpl.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2050 unit: protected AbstractEventHandlingInputPort() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractEventHandlingInputPort.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2051 unit: public Datalink getIncomingLink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractEventHandlingInputPort.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2052 unit: protected void setIncomingLink() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractEventHandlingInputPort.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2053 unit: protected void setName() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/impl/AbstractEventHandlingInputPort.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2054 unit: public ActivityInputPortImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/activity/impl/ActivityInputPortImpl.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2055 unit: public boolean allowsLiteralValues() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/activity/impl/ActivityInputPortImpl.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2056 unit: public Class getTranslatedElementClass() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/activity/impl/ActivityInputPortImpl.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2057 unit: protected DispatchLayer firstLayer() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 260 end line: 262 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2058 unit: public Object getConfiguration() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 311 end line: 314 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2059 unit: public final DispatchStack getSubject() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2060 unit: public final boolean isApplied() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/AbstractDispatchLayerEdit.java start line: 82 end line: 84 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2061 unit: private IterationInternalEvent unwrap() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 81 end line: 83 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 2062 unit: public void receiveCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2063 unit: public void receiveJob() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 91 end line: 93 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2064 unit: public void receiveBypassCompletion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2065 unit: public IterationStrategyImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2066 unit: public TerminalNode getTerminalNode() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 113 end line: 115 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2067 unit: public void setIterationStrategyStack() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyImpl.java start line: 270 end line: 272 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2068 unit: public List getStrategies() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 109 end line: 111 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2069 unit: public void clear() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 113 end line: 115 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2070 unit: public InvocationContext getContext() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2071 unit: public void addFacadeListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 240 end line: 242 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2072 unit: public Date getLastModified() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 274 end line: 276 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2073 unit: public State getValue() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 284 end line: 286 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2074 unit: public Dataflow getDataflow() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 290 end line: 292 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2075 unit: public TypedTreeModel getStateModel() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 295 end line: 298 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2076 unit: public void removeFacadeListener() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 340 end line: 342 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2077 unit: public ProcessorFinishedObserver() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 413 end line: 415 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2078 unit: public WeakHashMap getPushedDataMap() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 496 end line: 498 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2079 unit: public void setWorkflowRunId() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 500 end line: 502 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2080 unit: public String getWorkflowRunId() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 505 end line: 507 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2081 unit: public synchronized State getState() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 510 end line: 512 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2082 unit: public String getIdentifier() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/facade/impl/WorkflowInstanceFacadeImpl.java start line: 627 end line: 629 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2083 unit: public AnnotationBeanSPI getDetail() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2084 unit: public AnnotationRole getRole() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2085 unit: public Date getCreationDate() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2086 unit: public List getCreators() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2087 unit: public void addCreator() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2088 unit: public void removeCreator() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2089 unit: public AnnotationSourceSPI getSource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2090 unit: public void setAnnotationBean() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2091 unit: public void setAnnotationRole() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2092 unit: public void removeAnnotationRole() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2093 unit: public void setDate() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 106 end line: 108 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2094 unit: public void setCreators() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2095 unit: public void setAnnotationSource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 114 end line: 116 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2096 unit: public void removeAnnotationSource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2097 unit: public void removeAnnotationBean() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 122 end line: 124 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2098 unit: public void addCurationEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 126 end line: 128 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2099 unit: public void removeCurationEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationAssertionImpl.java start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2100 unit: public PersonImpl() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/PersonImpl.java start line: 28 end line: 30 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2101 unit: public URISource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/URISource.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2102 unit: public void setUri() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/URISource.java start line: 36 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2103 unit: public URI getUri() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/URISource.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2104 unit: public DisputeEventDetails getDetail() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2105 unit: public Curateable getTarget() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2106 unit: public CurationEventType getType() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2107 unit: public void setDisputeEventDetails() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 56 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2108 unit: public void setCurationEventType() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 62 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2109 unit: public void setTargetEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 68 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2110 unit: public void addAnnotationAssertion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationChainImpl.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2111 unit: public void removeAnnotationAssertion() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/AnnotationChainImpl.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2112 unit: public ErrorDocumentImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2113 unit: public String getExceptionMessage() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2114 unit: public void setExceptionMessage() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2115 unit: public String getMessage() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2116 unit: public void setMessage() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2117 unit: public List getStackTraceStrings() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2118 unit: public void setStackTraceList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2119 unit: public List getStackTraceList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2120 unit: public Set getErrorReferences() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2121 unit: public void setErrorReferenceSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2122 unit: public Set getErrorReferenceSet() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 111 end line: 113 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2123 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ErrorDocumentImpl.java start line: 116 end line: 118 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2124 unit: public String getClassName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2125 unit: public void setClassName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2126 unit: public String getFileName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 51 end line: 53 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2127 unit: public void setFileName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2128 unit: public int getLineNumber() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2129 unit: public void setLineNumber() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2130 unit: public String getMethodName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2131 unit: public void setMethodName() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2132 unit: public final void setReferenceSetDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2133 unit: public final void setT2ReferenceGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2134 unit: public final void setReferenceSetAugmentor() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceSetServiceImpl.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2135 unit: public InMemoryErrorDocumentDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2136 unit: public synchronized void store() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2137 unit: public final void setErrorDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2138 unit: public final void setT2ReferenceGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractErrorDocumentServiceImpl.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2139 unit: private final ReferenceServiceCacheProvider getCacheProvider() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/CacheAspect.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2140 unit: public AbstractT2ReferenceGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractT2ReferenceGenerator.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2141 unit: public InMemoryReferenceSetDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2142 unit: public synchronized void store() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2143 unit: public synchronized void update() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2144 unit: public synchronized boolean delete() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryReferenceSetDao.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2145 unit: public T2Reference getId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractEntityImpl.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2146 unit: public void setTypedId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractEntityImpl.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2147 unit: public T2ReferenceImpl getTypedId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractEntityImpl.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2148 unit: public void setInternalId() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractEntityImpl.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2149 unit: public InMemoryListDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/InMemoryListDao.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2150 unit: public void setNamespace() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/SimpleT2ReferenceGenerator.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2151 unit: public String getNamespace() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/SimpleT2ReferenceGenerator.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2152 unit: protected synchronized String getNextLocalPart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/SimpleT2ReferenceGenerator.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2153 unit: public boolean contains() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2154 unit: public boolean containsAll() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2155 unit: public T get() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2156 unit: public int indexOf() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2157 unit: public boolean isEmpty() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 112 end line: 114 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2158 unit: public Iterator iterator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 117 end line: 119 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2159 unit: public int lastIndexOf() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 122 end line: 124 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2160 unit: public ListIterator listIterator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 190 end line: 192 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2161 unit: public ListIterator listIterator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 195 end line: 197 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2162 unit: public int size() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 230 end line: 232 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2163 unit: public List subList() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/IdentifiedArrayList.java start line: 235 end line: 237 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2164 unit: public void setNamespace() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/UUIDT2ReferenceGenerator.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2165 unit: public String getNamespace() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/UUIDT2ReferenceGenerator.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2166 unit: protected String getNextLocalPart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/UUIDT2ReferenceGenerator.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2167 unit: public WriteQueueAspect() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/WriteQueueAspect.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2168 unit: public int cacheSize() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/WriteQueueAspect.java start line: 138 end line: 140 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2169 unit: public T2Reference getReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ContextualizedT2ReferenceImpl.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2170 unit: public ExternalReferenceBuilderSPI getInitialBuilder() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 262 end line: 264 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2171 unit: public void setInitialBuilder() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 266 end line: 268 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2172 unit: public ExternalReferenceSPI getSourceReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 270 end line: 272 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2173 unit: public void setSourceReference() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 274 end line: 276 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2174 unit: public void setBuilders() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 282 end line: 284 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2175 unit: public T2ReferenceListImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceListImpl.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2176 unit: public List getListContents() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceListImpl.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2177 unit: public void setListContents() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceListImpl.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2178 unit: public final void setErrorDocumentService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2179 unit: public final void setReferenceSetService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2180 unit: public final void setListService() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractReferenceServiceImpl.java start line: 91 end line: 93 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2181 unit: public Set getExternalReferences() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2182 unit: public void setExternalReferences() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2183 unit: public void setApproximateSizeInBytes() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 114 end line: 116 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2184 unit: public Long getApproximateSizeInBytes() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2185 unit: protected void executeRunnable() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractServiceImpl.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2186 unit: protected Thread makeExecutionThread() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractServiceImpl.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2187 unit: public final void setListDao() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractListServiceImpl.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2188 unit: public final void setT2ReferenceGenerator() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/AbstractListServiceImpl.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2189 unit: public List getEntities() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/EmptyReferenceContext.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2190 unit: public boolean containsErrors() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2191 unit: public boolean getContainsErrors() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2192 unit: public int getDepth() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2193 unit: public String getNamespacePart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 122 end line: 124 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2194 unit: public T2ReferenceType getReferenceType() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2195 unit: public synchronized void setNamespacePart() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 139 end line: 141 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2196 unit: public synchronized void setDepth() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 164 end line: 166 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2197 unit: public synchronized void setContainsErrors() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 173 end line: 175 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2198 unit: public synchronized void setReferenceType() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 182 end line: 184 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2199 unit: public String toString() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 191 end line: 193 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2200 unit: public synchronized String getCompactForm() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 284 end line: 286 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2201 unit: public ReferenceSetAugmentorImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2202 unit: public void buildersUpdated() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2203 unit: public void translatorsUpdated() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2204 unit: private void executeRunnable() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 338 end line: 340 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2205 unit: public List getTranslationPaths() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 366 end line: 368 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2206 unit: private boolean isSettled() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 436 end line: 438 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2207 unit: private Class extractMin() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.java start line: 450 end line: 452 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2208 unit: public void setActivityFactories() file: taverna-capability-impl/src/main/java/org/apache/taverna/platform/capability/activity/impl/ActivityServiceImpl.java start line: 127 end line: 129 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2209 unit: public InvalidConfigurationException() file: taverna-services-api/src/main/java/org/apache/taverna/services/InvalidConfigurationException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2210 unit: public InvalidConfigurationException() file: taverna-services-api/src/main/java/org/apache/taverna/services/InvalidConfigurationException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2211 unit: public InvalidConfigurationException() file: taverna-services-api/src/main/java/org/apache/taverna/services/InvalidConfigurationException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2212 unit: public InvalidConfigurationException() file: taverna-services-api/src/main/java/org/apache/taverna/services/InvalidConfigurationException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2213 unit: public ActivityTypeNotFoundException() file: taverna-services-api/src/main/java/org/apache/taverna/services/ActivityTypeNotFoundException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2214 unit: public ActivityTypeNotFoundException() file: taverna-services-api/src/main/java/org/apache/taverna/services/ActivityTypeNotFoundException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2215 unit: public ActivityTypeNotFoundException() file: taverna-services-api/src/main/java/org/apache/taverna/services/ActivityTypeNotFoundException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2216 unit: public ActivityTypeNotFoundException() file: taverna-services-api/src/main/java/org/apache/taverna/services/ActivityTypeNotFoundException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2217 unit: public String getPasswordAsString() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2218 unit: public String getUsername() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2219 unit: public boolean isShouldSave() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2220 unit: public void setShouldSave() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2221 unit: public void setUsername() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2222 unit: protected void finalize() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2223 unit: public KeystoreChangedEvent() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/KeystoreChangedEvent.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2224 unit: public CMException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2225 unit: public CMException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2226 unit: public CMException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMException.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2227 unit: public CMException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMException.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2228 unit: public CMNotInitialisedException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMNotInitialisedException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2229 unit: public CMNotInitialisedException() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/CMNotInitialisedException.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2230 unit: public WorkflowBundle getWorkflowBundle() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2231 unit: public void setWorkflowBundle() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 109 end line: 111 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2232 unit: public void setWorkflowName() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 134 end line: 136 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2233 unit: public void setProfileName() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 164 end line: 166 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2234 unit: public Bundle getDataBundle() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 175 end line: 177 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2235 unit: public void setDataBundle() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 187 end line: 189 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2236 unit: public ExecutionEnvironment getExecutionEnvironment() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfile.java start line: 198 end line: 200 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2237 unit: public InvalidRunIdException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/InvalidRunIdException.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2238 unit: public InvalidRunIdException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/InvalidRunIdException.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2239 unit: public InvalidRunIdException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/InvalidRunIdException.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2240 unit: public InvalidRunIdException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/InvalidRunIdException.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2241 unit: public RunProfileException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfileException.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2242 unit: public RunProfileException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfileException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2243 unit: public RunProfileException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfileException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2244 unit: public RunProfileException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunProfileException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2245 unit: public RunStateException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunStateException.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2246 unit: public RunStateException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunStateException.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2247 unit: public RunStateException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunStateException.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2248 unit: public RunStateException() file: taverna-run-api/src/main/java/org/apache/taverna/platform/run/api/RunStateException.java start line: 43 end line: 45 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2249 unit: public void setExecutionServices() file: taverna-execution-impl/src/main/java/org/apache/taverna/platform/execution/impl/ExecutionEnvironmentServiceImpl.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2250 unit: private String getInvocationName() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 338 end line: 340 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2251 unit: public NestedDataflowResultListener() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 492 end line: 494 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2252 unit: public DataflowResultListener() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionMonitor.java start line: 516 end line: 518 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2253 unit: public void setEdits() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2254 unit: public void setActivityService() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2255 unit: public void setDispatchLayerService() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2256 unit: public void setReferenceService() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionService.java start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2257 unit: public void delete() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 130 end line: 132 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2258 unit: public void pause() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 173 end line: 175 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2259 unit: public void resume() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 178 end line: 180 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2260 unit: protected WorkflowReport createWorkflowReport() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 190 end line: 192 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2261 unit: public Set getActivityTypes() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2262 unit: public boolean activityExists() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2263 unit: public Set getDispatchLayerTypes() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2264 unit: public boolean dispatchLayerExists() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecutionEnvironment.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2265 unit: public Object getValue() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/StaticProperty.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2266 unit: public Date getLastModified() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/StaticProperty.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2267 unit: public Workflow getWorkflow() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/WorkflowToDataflowMapper.java start line: 132 end line: 134 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2268 unit: public Bundle getBundle() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 126 end line: 128 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2269 unit: private void setBundle() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 144 end line: 146 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2270 unit: private String hexOfDigest() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 346 end line: 348 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2271 unit: public ReferenceService getReferenceService() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 350 end line: 352 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2272 unit: public void setReferenceService() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 354 end line: 356 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2273 unit: public InvocationContext getContext() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 358 end line: 360 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2274 unit: public void setContext() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 362 end line: 364 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2275 unit: public String getRunId() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 366 end line: 368 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2276 unit: public void setRunId() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 370 end line: 372 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2277 unit: public Map getChosenReferences() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 374 end line: 376 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2278 unit: public void setChosenReferences() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 378 end line: 380 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2279 unit: public Map getFileToId() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 382 end line: 384 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2280 unit: public void setFileToId() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 386 end line: 388 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2281 unit: public Map getSha1sums() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 390 end line: 392 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2282 unit: public Map getMediaTypes() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 394 end line: 396 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2283 unit: public Map getSha512sums() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 398 end line: 400 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2284 unit: public void setMediaTypes() file: taverna-prov/src/main/java/org/apache/taverna/prov/Saver.java start line: 402 end line: 404 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2285 unit: public SafeFileOutputStream() file: taverna-prov/src/main/java/org/apache/taverna/prov/SafeFileOutputStream.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2286 unit: public Path getBaseFolder() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 138 end line: 140 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2287 unit: public Map getFileToT2Reference() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 142 end line: 144 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2288 unit: public String getPath() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 250 end line: 252 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2289 unit: protected void label() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 452 end line: 454 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2290 unit: protected URI toURI() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 543 end line: 545 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2291 unit: private boolean seenReference() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 657 end line: 659 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2292 unit: public ProvenanceAccess getProvenanceAccess() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 796 end line: 798 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2293 unit: public void setProvenanceAccess() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 800 end line: 802 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2294 unit: public String getWorkflowRunId() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 804 end line: 806 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2295 unit: public void setWorkflowRunId() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 808 end line: 810 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2296 unit: public Bundle getBundle() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 827 end line: 829 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2297 unit: public void setBundle() file: taverna-prov/src/main/java/org/apache/taverna/prov/W3ProvenanceExport.java start line: 1022 end line: 1024 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2298 unit: public String getStringValue() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivity.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2299 unit: public JsonNode getConfiguration() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivity.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2300 unit: public boolean canVisit() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityHealthChecker.java start line: 32 end line: 34 size: 3 LOC McCabe index: 2 number of parameters: 1 id: 2301 unit: public boolean isTimeConsuming() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityHealthChecker.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2302 unit: public StringConstantActivity createActivity() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2303 unit: public URI getActivityType() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2304 unit: public Set getInputPorts() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2305 unit: public void setEdits() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantActivityFactory.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2306 unit: public String getValue() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantConfigurationBean.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2307 unit: public void setValue() file: taverna-stringconstant-activity/src/main/java/org/apache/taverna/activities/stringconstant/StringConstantConfigurationBean.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2308 unit: public List getDataValueExtractor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 90 end line: 92 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2309 unit: public ProvenanceContextFacade getGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 279 end line: 281 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2310 unit: public ProvenanceAccount getAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 286 end line: 288 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2311 unit: public void setAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 294 end line: 296 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2312 unit: public ProvenanceRole getCurrentRole() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 301 end line: 303 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2313 unit: public void setCurrentRole() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 309 end line: 311 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2314 unit: public ProvenanceArtifact getCurrentArtifact() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 316 end line: 318 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2315 unit: public void setCurrentArtifact() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 324 end line: 326 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2316 unit: public ProvenanceAccount getCurrentAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 331 end line: 333 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2317 unit: public void setCurrentAccount() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 339 end line: 341 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2318 unit: public ProvenanceProcess getCurrentProcess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 346 end line: 348 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2319 unit: public void setCurrentProcess() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 354 end line: 356 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2320 unit: public void setGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 418 end line: 420 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2321 unit: public void setActive() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 422 end line: 424 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2322 unit: public boolean isActive() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMManager.java start line: 426 end line: 428 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2323 unit: public OPMImporter() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2324 unit: private String removeBlanks() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/opm/OPMImporter.java start line: 337 end line: 339 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2325 unit: public AbstractProvenanceConnector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 281 end line: 283 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2326 unit: public InvocationContext getInvocationContext() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 315 end line: 317 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2327 unit: public void setInvocationContext() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 324 end line: 326 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2328 unit: public ReferenceService getReferenceService() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 332 end line: 334 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2329 unit: public void setReferenceService() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 341 end line: 343 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2330 unit: protected Connection getConnection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 375 end line: 377 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2331 unit: public void setSessionID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 506 end line: 508 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2332 unit: public String getSessionID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 516 end line: 518 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2333 unit: public String getSaveEvents() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 539 end line: 541 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2334 unit: public void setSaveEvents() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 547 end line: 549 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2335 unit: public void setProvenance() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 551 end line: 553 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2336 unit: public Provenance getProvenance() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 555 end line: 557 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2337 unit: public void setFinished() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 559 end line: 561 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2338 unit: public boolean isFinished() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 563 end line: 565 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2339 unit: public void setExecutor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 567 end line: 569 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2340 unit: public synchronized ExecutorService getExecutor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 571 end line: 573 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2341 unit: public void setProvenanceAnalysis() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 575 end line: 577 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2342 unit: public ProvenanceAnalysis getProvenanceAnalysis() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 585 end line: 587 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2343 unit: public ProvenanceWriter getWriter() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 592 end line: 594 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2344 unit: protected void setWriter() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 599 end line: 601 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2345 unit: public ProvenanceQuery getQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 606 end line: 608 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2346 unit: protected void setQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 613 end line: 615 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2347 unit: public WorkflowDataProcessor getWfdp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 620 end line: 622 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2348 unit: public void setWfdp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 627 end line: 629 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2349 unit: public EventProcessor getEventProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 634 end line: 636 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2350 unit: public void setEventProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/connector/AbstractProvenanceConnector.java start line: 641 end line: 643 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2351 unit: public List getWorkflowRunIds() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 181 end line: 183 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2352 unit: public void addStep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 885 end line: 887 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2353 unit: public void removeLastStep() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 889 end line: 891 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2354 unit: public List getPath() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 896 end line: 898 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2355 unit: public void setPath() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 904 end line: 906 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2356 unit: public String getIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 911 end line: 913 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2357 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 919 end line: 921 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2358 unit: public int getIic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 926 end line: 928 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2359 unit: public void setIic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 934 end line: 936 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2360 unit: public String getCollectionRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 941 end line: 943 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2361 unit: public void setCollectionRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 949 end line: 951 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2362 unit: public String getProc() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 956 end line: 958 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2363 unit: public void setProc() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 964 end line: 966 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2364 unit: public String getVar() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 971 end line: 973 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2365 unit: public void setVar() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 979 end line: 981 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2366 unit: public String getVarType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 986 end line: 988 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2367 unit: public void setVarType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 994 end line: 996 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2368 unit: public String getWorkflowRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1001 end line: 1003 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2369 unit: public void setWorkflowRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1009 end line: 1011 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2370 unit: public boolean isXform() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1016 end line: 1018 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2371 unit: public void setXform() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1024 end line: 1026 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2372 unit: public int getCollectionNesting() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1031 end line: 1033 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2373 unit: public void setCollectionNesting() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1039 end line: 1041 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2374 unit: public String getIterationVector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1046 end line: 1048 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2375 unit: public void setIterationVector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1054 end line: 1056 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2376 unit: public int getDNL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1061 end line: 1063 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2377 unit: public void setDNL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1069 end line: 1071 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2378 unit: public int getANL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1076 end line: 1078 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2379 unit: public void setANL() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1084 end line: 1086 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2380 unit: public void setPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1105 end line: 1107 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2381 unit: public ProvenanceQuery getPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1109 end line: 1111 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2382 unit: public boolean isReady() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1116 end line: 1118 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2383 unit: public void setReady() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1124 end line: 1126 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2384 unit: public boolean isReturnOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1131 end line: 1133 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2385 unit: public void setReturnOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1139 end line: 1141 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2386 unit: public boolean isRecordArtifactValues() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1146 end line: 1148 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2387 unit: public void setRecordArtifactValues() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1154 end line: 1157 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2388 unit: public boolean isIncludeDataValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1162 end line: 1164 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2389 unit: public void setIncludeDataValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1170 end line: 1172 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2390 unit: public boolean isGenerateOPMGraph() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1177 end line: 1179 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2391 unit: public void setInvocationContext() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1191 end line: 1193 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2392 unit: public InvocationContext getInvocationContext() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 1195 end line: 1197 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2393 unit: public void setProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2394 unit: public ProcessorType getProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2395 unit: public void setProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2396 unit: public String getDataflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2397 unit: public void setDataflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2398 unit: public String getFacadeID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2399 unit: public void setFacadeID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 101 end line: 103 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2400 unit: public PortsSequenceType getInputdata() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2401 unit: public void setInputdata() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2402 unit: public PortsSequenceType getOutputdata() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2403 unit: public void setOutputdata() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2404 unit: public String getId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 82 end line: 84 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2405 unit: public void setId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 91 end line: 93 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2406 unit: public DataDocumentType getDataDocument() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2407 unit: public void setDataDocument() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2408 unit: public LiteralType getLiteral() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2409 unit: public void setLiteral() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2410 unit: public String getName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2411 unit: public void setName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2412 unit: public void setActivity() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2413 unit: public ActivityType getActivity() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2414 unit: public void setActivity() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2415 unit: public String getId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2416 unit: public void setId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2417 unit: public String getReference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2418 unit: public void setReference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2419 unit: public String getId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2420 unit: public void setId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2421 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2422 unit: public IterationType getIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2423 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 63 end line: 65 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2424 unit: public void setId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2425 unit: public PortsSequenceType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortsSequenceType.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2426 unit: public void setPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortsSequenceType.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2427 unit: public PortType getPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortsSequenceType.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2428 unit: public void setPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortsSequenceType.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2429 unit: public LiteralType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/LiteralType.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2430 unit: public String getId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/LiteralType.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2431 unit: public void setId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/LiteralType.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2432 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 25 end line: 27 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 2433 unit: public String getActivityId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2434 unit: public void setActivityId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2435 unit: public String getActivityDefinition() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2436 unit: public void setActivityDefinition() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2437 unit: public Workflow getWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2438 unit: public void setWorkflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Activity.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2439 unit: public List getChildren() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2440 unit: public void setChildren() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2441 unit: public Workflow getNode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2442 unit: public void setNode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2443 unit: public void addChild() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2444 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2445 unit: public String toString() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowTree.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2446 unit: public String getIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2447 unit: public void setIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2448 unit: public String getParentIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2449 unit: public void setParentIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2450 unit: public String getWorkflowRunIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 46 end line: 48 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2451 unit: public void setWorkflowRunIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2452 unit: public String getProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 54 end line: 56 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2453 unit: public void setProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2454 unit: public String getPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2455 unit: public void setPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 66 end line: 68 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2456 unit: public String getIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2457 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2458 unit: public void setCollId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2459 unit: public String getCollId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Collection.java start line: 82 end line: 84 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2460 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 33 end line: 35 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2461 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2462 unit: public String getSourcePortId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2463 unit: public void setSourcePortId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 49 end line: 51 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2464 unit: public String getSourceProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2465 unit: public void setSourceProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2466 unit: public String getSourcePortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2467 unit: public void setSourcePortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2468 unit: public String getDestinationPortId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 83 end line: 85 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2469 unit: public void setDestinationPortId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2470 unit: public String getDestinationProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2471 unit: public void setDestinationProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2472 unit: public String getDestinationPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 109 end line: 111 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2473 unit: public void setDestinationPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataLink.java start line: 117 end line: 119 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2474 unit: public String getProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2475 unit: public void setProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2476 unit: public String getPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 59 end line: 61 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2477 unit: public void setPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 67 end line: 69 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2478 unit: public String getPath() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 74 end line: 76 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2479 unit: public void setPath() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 82 end line: 84 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2480 unit: public String getValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2481 unit: public void setValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2482 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 104 end line: 106 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2483 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 112 end line: 114 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2484 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2485 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/QueryPort.java start line: 127 end line: 129 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2486 unit: public int hashCode() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 36 end line: 38 size: 3 LOC McCabe index: 2 number of parameters: 0 id: 2487 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 70 end line: 72 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2488 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2489 unit: public String getPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2490 unit: public void setPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2491 unit: public String getProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2492 unit: public void setProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2493 unit: public boolean isInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 116 end line: 118 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2494 unit: public void setInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 125 end line: 127 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2495 unit: public int getDepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 132 end line: 134 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2496 unit: public void setDepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 140 end line: 142 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2497 unit: public Integer getResolvedDepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 147 end line: 149 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2498 unit: public void setResolvedDepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 155 end line: 157 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2499 unit: public boolean isResolvedDepthSet() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 162 end line: 164 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2500 unit: public void setIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 166 end line: 168 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2501 unit: public String getIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 170 end line: 172 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2502 unit: public int getIterationStrategyOrder() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 177 end line: 179 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2503 unit: public void setIterationStrategyOrder() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 185 end line: 187 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2504 unit: public String getProcessorId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 189 end line: 191 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2505 unit: public void setProcessorId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Port.java start line: 193 end line: 195 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2506 unit: public ProcessorEnactment getProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2507 unit: public void setProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2508 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2509 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2510 unit: public long getInvocationNumber() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2511 unit: public void setInvocationNumber() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2512 unit: public Timestamp getInvocationStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2513 unit: public void setInvocationStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2514 unit: public Timestamp getInvocationEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2515 unit: public void setInvocationEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2516 unit: public DataBinding getInputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2517 unit: public void setInputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2518 unit: public DataBinding getOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2519 unit: public void setOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2520 unit: public String getFailureT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2521 unit: public void setFailureT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 96 end line: 98 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2522 unit: public Activity getActivity() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2523 unit: public void setActivity() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 104 end line: 106 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2524 unit: public String getInitiatingDispatchLayer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 108 end line: 110 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2525 unit: public void setInitiatingDispatchLayer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 112 end line: 114 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2526 unit: public String getFinalDispatchLayer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 116 end line: 118 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2527 unit: public void setFinalDispatchLayer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ServiceInvocation.java start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2528 unit: public String getDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 27 end line: 29 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2529 unit: public void setDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 31 end line: 33 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2530 unit: public Port getPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 35 end line: 37 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2531 unit: public void setPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 39 end line: 41 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2532 unit: public String getT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2533 unit: public void setT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2534 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2535 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataBinding.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2536 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 36 end line: 38 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2537 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2538 unit: public void setTimestamp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 44 end line: 46 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2539 unit: public String getTimestamp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 48 end line: 50 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2540 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2541 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2542 unit: public String getWorkflowExternalName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2543 unit: public void setWorkflowExternalName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2544 unit: public void setDataflowBlob() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/WorkflowRun.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2545 unit: public String getDataflowInvocationId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2546 unit: public void setDataflowInvocationId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2547 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2548 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 77 end line: 79 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2549 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 81 end line: 83 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2550 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 85 end line: 87 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2551 unit: public String getParentProcessorEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2552 unit: public void setParentProcessorEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 93 end line: 95 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2553 unit: public String getInputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 97 end line: 99 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2554 unit: public void setInputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 101 end line: 103 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2555 unit: public String getOutputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 105 end line: 107 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2556 unit: public void setOutputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 109 end line: 111 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2557 unit: public Timestamp getInvocationEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 113 end line: 115 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2558 unit: public void setInvocationEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 117 end line: 119 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2559 unit: public Timestamp getInvocationStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 121 end line: 123 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2560 unit: public void setInvocationStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 125 end line: 127 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2561 unit: public void setCompleted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 129 end line: 131 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2562 unit: public boolean getCompleted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/DataflowInvocation.java start line: 133 end line: 135 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2563 unit: public Timestamp getEnactmentEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2564 unit: public Timestamp getEnactmentStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 56 end line: 58 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2565 unit: public String getFinalOutputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2566 unit: public String getInitialInputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2567 unit: public String getIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 68 end line: 70 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2568 unit: public String getParentProcessorEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 72 end line: 74 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2569 unit: public String getProcessEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 76 end line: 78 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2570 unit: public String getProcessIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2571 unit: public String getProcessorId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 84 end line: 86 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2572 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2573 unit: public void setEnactmentEnded() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2574 unit: public void setEnactmentStarted() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2575 unit: public void setFinalOutputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 111 end line: 113 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2576 unit: public void setInitialInputsDataBindingId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 115 end line: 117 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2577 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 119 end line: 121 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2578 unit: public void setParentProcessorEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 123 end line: 125 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2579 unit: public void setProcessEnactmentId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 127 end line: 129 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2580 unit: public void setProcessIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 131 end line: 133 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2581 unit: public void setProcessorId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 135 end line: 137 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2582 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorEnactment.java start line: 139 end line: 141 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2583 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 52 end line: 54 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2584 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2585 unit: public String getFirstActivityClassName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2586 unit: public void setFirstActivityClassName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2587 unit: public String getProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 86 end line: 88 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2588 unit: public void setProcessorName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 94 end line: 96 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2589 unit: public void setIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 98 end line: 100 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2590 unit: public String getIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2591 unit: public void setTopLevelProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 106 end line: 108 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2592 unit: public boolean isTopLevelProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2593 unit: public String getCollectionT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 32 end line: 34 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2594 unit: public void setCollectionT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 40 end line: 42 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2595 unit: public String getParentCollIdRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 47 end line: 49 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2596 unit: public void setParentCollIdRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 55 end line: 57 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2597 unit: public String getWorkflowRunId() file: 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taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 92 end line: 94 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2602 unit: public void setPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 100 end line: 102 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2603 unit: public String getIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 107 end line: 109 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2604 unit: public void setIteration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/NestedListNode.java start line: 115 end line: 117 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2605 unit: public String getPortId() file: 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setFirstActivityClassName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2638 unit: public String getIterationVector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2639 unit: public void setIterationVector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2640 unit: public void setIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 99 end line: 101 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2641 unit: public String getIdentifier() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2642 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2643 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProcessorBinding.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2644 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Workflow.java start line: 26 end line: 28 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2645 unit: public String getWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Workflow.java start line: 30 end line: 32 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2646 unit: public void setParentWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Workflow.java start line: 34 end line: 36 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2647 unit: public String getParentWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Workflow.java start line: 38 end line: 40 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2648 unit: public String getExternalName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/Workflow.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2649 unit: public void setExternalName() file: 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isInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 165 end line: 167 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2682 unit: public void setIsInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 173 end line: 175 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2683 unit: public String getCollectionT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 181 end line: 183 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2684 unit: public void setCollectionT2Reference() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 189 end line: 191 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2685 unit: public boolean isCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 197 end line: 199 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2686 unit: public void setCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 205 end line: 207 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2687 unit: public String getParentCollIDRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 213 end line: 215 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2688 unit: public void setParentCollIDRef() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 221 end line: 223 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2689 unit: public String getworkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 229 end line: 231 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2690 unit: public void setWorkflowId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageQueryResultRecord.java start line: 237 end line: 239 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2691 unit: public int getdepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2692 unit: public void setdepth() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 50 end line: 52 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2693 unit: public String getCollQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 57 end line: 59 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2694 unit: public void setCollQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 64 end line: 66 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2695 unit: public String getVbQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 71 end line: 73 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2696 unit: public void setVbQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/LineageSQLQuery.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2697 unit: public EventProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 164 end line: 166 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2698 unit: public void reconcileTopLevelOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 821 end line: 823 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2699 unit: String extractIterationVector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1287 end line: 1289 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2700 unit: public Pair() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1299 end line: 1301 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2701 unit: public String getV1() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1306 end line: 1308 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2702 unit: public void setV1() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1313 end line: 1315 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2703 unit: public String getV2() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1320 end line: 1322 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2704 unit: public void setV2() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1327 end line: 1329 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2705 unit: public void setPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1514 end line: 1516 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2706 unit: public ProvenanceWriter getPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1518 end line: 1520 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2707 unit: public void setPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1522 end line: 1524 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2708 unit: public ProvenanceQuery getPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1526 end line: 1528 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2709 unit: public void setWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1530 end line: 1532 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2710 unit: public String getWorkflowRunId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1534 end line: 1536 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2711 unit: public void setWfdp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1538 end line: 1540 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2712 unit: public WorkflowDataProcessor getWfdp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/EventProcessor.java start line: 1542 end line: 1544 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2713 unit: public ProvenanceQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 79 end line: 81 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2714 unit: private Q query() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2715 unit: public ResultSet exec() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 120 end line: 122 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2716 unit: public String query() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceQuery.java start line: 123 end line: 125 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2717 unit: public boolean isFirstWorkflowStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 58 end line: 60 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2718 unit: public void setFirstWorkflowStructure() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 62 end line: 64 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2719 unit: public String getSaveEvents() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 87 end line: 89 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2720 unit: public void setSaveEvents() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2721 unit: public void setPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 102 end line: 104 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2722 unit: public ProvenanceQuery getPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 106 end line: 108 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2723 unit: public void setPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2724 unit: public ProvenanceWriter getPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 114 end line: 116 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2725 unit: public void setEp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2726 unit: public EventProcessor getEp() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 122 end line: 124 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2727 unit: public ProvenanceWriter() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2728 unit: public Connection getConnection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 69 end line: 71 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2729 unit: public Set clearDBDynamic() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 555 end line: 557 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2730 unit: public void setQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 667 end line: 669 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2731 unit: public ProvenanceQuery getQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 671 end line: 673 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2732 unit: public String makeWFInstanceURI() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2733 unit: public String makeWorkflowURI() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 41 end line: 43 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2734 unit: public String makeProcessorURI() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 60 end line: 62 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2735 unit: public URI makeRunUri() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/URIGenerator.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2736 unit: public ListIterator iterator() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 42 end line: 44 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2737 unit: public void setRecords() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 89 end line: 91 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2738 unit: public List getRecords() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 96 end line: 98 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2739 unit: public boolean isPrintResolvedValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 114 end line: 116 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2740 unit: public void setPrintResolvedValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Dependencies.java start line: 122 end line: 124 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2741 unit: public String getProcessId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 316 end line: 318 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2742 unit: public String getValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 323 end line: 325 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2743 unit: public void setProcessId() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 327 end line: 330 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2744 unit: public void setValue() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 336 end line: 338 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2745 unit: public String getIndex() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 343 end line: 345 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2746 unit: public void setIndex() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 351 end line: 353 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2747 unit: public String getPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 358 end line: 360 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2748 unit: public void setPortName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 366 end line: 368 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2749 unit: public boolean isList() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 373 end line: 375 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2750 unit: public void setList() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 381 end line: 383 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2751 unit: public WorkflowDataNode getParent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 388 end line: 390 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2752 unit: public void setParent() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 396 end line: 398 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2753 unit: public int getRelativePosition() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 403 end line: 405 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2754 unit: public void setRelativePosition() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 411 end line: 413 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2755 unit: public String getWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 418 end line: 420 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2756 unit: public void setWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 426 end line: 428 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2757 unit: public void setInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 430 end line: 432 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2758 unit: public boolean isInputPort() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 434 end line: 436 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2759 unit: public ProvenanceQuery getPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 442 end line: 444 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2760 unit: public void setPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 450 end line: 452 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2761 unit: public ProvenanceWriter getPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 457 end line: 459 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2762 unit: public void setPw() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/WorkflowDataProcessor.java start line: 465 end line: 467 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2763 unit: public void setAnswer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/NativeAnswer.java start line: 78 end line: 80 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2764 unit: public NativeAnswer getNativeAnswer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/QueryAnswer.java start line: 37 end line: 39 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2765 unit: public void setNativeAnswer() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/QueryAnswer.java start line: 45 end line: 47 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2766 unit: public String getOPMAnswer_AsRDF() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/QueryAnswer.java start line: 53 end line: 55 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2767 unit: public void setOPMAnswer_AsRDF() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/QueryAnswer.java start line: 61 end line: 63 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2768 unit: public List getTargetPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 65 end line: 67 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2769 unit: public void setTargetPorts() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 73 end line: 75 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2770 unit: public List getSelectedProcessors() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 80 end line: 82 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2771 unit: public void setFocus() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 88 end line: 90 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2772 unit: public List getRunIDList() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 95 end line: 97 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2773 unit: public void setRunIDList() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 103 end line: 105 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2774 unit: public String getWorkflowName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 110 end line: 112 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2775 unit: public void setWorkflowName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/Query.java start line: 118 end line: 120 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2776 unit: public static void initDataSource() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 112 end line: 114 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2777 unit: public InvocationContext initDefaultReferenceService() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 171 end line: 174 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2778 unit: public InvocationContext initReferenceService() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 183 end line: 186 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2779 unit: public void init() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 200 end line: 202 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2780 unit: public String getContainingCollection() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 283 end line: 285 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2781 unit: public boolean isTopLevelDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 313 end line: 315 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2782 unit: public boolean isTopLevelDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 318 end line: 320 size: 3 LOC McCabe index: 1 number of parameters: 2 id: 2783 unit: public String getLatestRunID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 323 end line: 325 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2784 unit: public List getCollectionsForRun() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 447 end line: 449 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2785 unit: public List getPortsForDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 465 end line: 467 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2786 unit: public List getAllPortsInDataflow() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 477 end line: 479 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2787 unit: public String getWorkflowNameByWorkflowID() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 497 end line: 499 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2788 unit: public void toggleIncludeProcessorOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 523 end line: 525 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2789 unit: public boolean isIncludeProcessorOutputs() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 528 end line: 530 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2790 unit: public InvocationContext getInvocationContext() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 537 end line: 539 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2791 unit: public void toggleOPMGeneration() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 548 end line: 550 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2792 unit: public boolean isOPMGenerationActive() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 557 end line: 559 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2793 unit: public void toggleAttachOPMArtifactValues() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 569 end line: 571 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2794 unit: public boolean isAttachOPMArtifactValues() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 577 end line: 579 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2795 unit: public String getWorkflowIDForExternalName() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 588 end line: 590 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2796 unit: public AbstractProvenanceConnector getProvenanceConnector() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 610 end line: 612 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2797 unit: public ProvenanceAnalysis getAnalysis() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 627 end line: 629 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2798 unit: public void setPa() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 635 end line: 637 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2799 unit: public ProvenanceQuery getQuery() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 643 end line: 645 size: 3 LOC McCabe index: 1 number of parameters: 0 id: 2800 unit: public void setPq() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 651 end line: 653 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2801 unit: public ProcessorEnactment getProcessorEnactment() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 669 end line: 671 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2802 unit: public ProvenanceProcessor getProvenanceProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 680 end line: 682 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2803 unit: public DataflowInvocation getDataflowInvocation() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 696 end line: 698 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2804 unit: public List getDataflowInvocations() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/api/ProvenanceAccess.java start line: 707 end line: 709 size: 3 LOC McCabe index: 1 number of parameters: 1 id: 2805 unit: public void setMasterPassword() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DefaultMasterPasswordProvider.java start line: 67 end line: 69 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2806 unit: public DistinguishedNameParserImpl() file: taverna-credential-manager-impl/src/main/java/org/apache/taverna/security/credentialmanager/impl/DistinguishedNameParserImpl.java start line: 47 end line: 48 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2807 unit: public void close() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/TavernaRecordReader.java start line: 100 end line: 102 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2808 unit: public void close() file: taverna-execution-hadoop/src/main/java/org/apache/taverna/platform/execution/impl/hadoop/CrossProductRecordReader.java start line: 126 end line: 129 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2809 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Failover.java start line: 102 end line: 104 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2810 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Stop.java start line: 60 end line: 62 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2811 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/IntermediateProvenance.java start line: 84 end line: 85 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2812 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Invoke.java start line: 98 end line: 100 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2813 unit: public void receiveCompletion() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/Loop.java start line: 311 end line: 313 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2814 unit: public void configure() file: taverna-workflowmodel-extensions/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/layers/ErrorBounce.java start line: 167 end line: 169 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2815 unit: public void start() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 66 end line: 69 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2816 unit: public void pause() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 72 end line: 75 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2817 unit: public void resume() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 78 end line: 81 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2818 unit: public void cancel() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 84 end line: 87 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2819 unit: public void delete() file: taverna-execution-remote/src/main/java/org/apache/taverna/platform/execution/impl/remote/RemoteExecution.java start line: 90 end line: 93 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2820 unit: protected MonitorManager() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/monitor/MonitorManager.java start line: 82 end line: 83 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2821 unit: public void finishedWith() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/AbstractDispatchLayer.java start line: 93 end line: 95 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2822 unit: public void innerReceiveCompletion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/CrossProduct.java start line: 127 end line: 129 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 2823 unit: public Optional() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/Optional.java start line: 39 end line: 41 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2824 unit: protected AbstractNumericRangeAssertion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericRangeAssertion.java start line: 43 end line: 45 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2825 unit: protected AbstractNumericValueAssertion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractNumericValueAssertion.java start line: 41 end line: 43 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2826 unit: public Author() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/Author.java start line: 39 end line: 41 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2827 unit: public FreeTextDescription() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/FreeTextDescription.java start line: 43 end line: 45 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2828 unit: protected AbstractTextualValueAssertion() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/AbstractTextualValueAssertion.java start line: 40 end line: 42 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2829 unit: public DescriptiveTitle() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/DescriptiveTitle.java start line: 37 end line: 39 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2830 unit: public ExampleValue() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/ExampleValue.java start line: 38 end line: 40 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2831 unit: public DocumentationUrl() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/annotation/annotationbeans/DocumentationUrl.java start line: 45 end line: 47 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2832 unit: public WorkflowDataProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowDataProvenanceItem.java start line: 53 end line: 54 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2833 unit: public WorkflowProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/WorkflowProvenanceItem.java start line: 51 end line: 52 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2834 unit: public ErrorProvenanceItem() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/provenance/item/ErrorProvenanceItem.java start line: 39 end line: 40 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2835 unit: private TreeModelAdapter() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/utility/TreeModelAdapter.java start line: 53 end line: 55 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2836 unit: public ReferenceServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceServiceException.java start line: 31 end line: 33 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2837 unit: public DereferenceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/DereferenceException.java start line: 32 end line: 34 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2838 unit: public ReferenceSetServiceException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceSetServiceException.java start line: 32 end line: 34 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2839 unit: public ReferenceSetAugmentationException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ReferenceSetAugmentationException.java start line: 31 end line: 33 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2840 unit: public ValueToReferenceConversionException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ValueToReferenceConversionException.java start line: 32 end line: 34 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2841 unit: public ExternalReferenceValidationException() file: taverna-reference-api/src/main/java/org/apache/taverna/reference/ExternalReferenceValidationException.java start line: 34 end line: 36 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2842 unit: public void outputAdded() file: taverna-run-impl/src/main/java/org/apache/taverna/platform/run/impl/RunServiceImpl.java start line: 250 end line: 251 size: 2 LOC McCabe index: 1 number of parameters: 3 id: 2843 unit: public BlueReference() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/BlueReference.java start line: 46 end line: 48 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2844 unit: public RedReference() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/RedReference.java start line: 46 end line: 48 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2845 unit: public YellowReference() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/YellowReference.java start line: 47 end line: 49 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2846 unit: public GreenReference() file: taverna-reference-testhelpers/src/main/java/org/apache/taverna/t2referencetest/GreenReference.java start line: 46 end line: 48 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2847 unit: public void configure() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/dispatch/impl/DispatchStackImpl.java start line: 306 end line: 308 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2848 unit: protected void receiveEventFromStrategy() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/workflowmodel/processor/iteration/impl/IterationStrategyStackImpl.java start line: 150 end line: 152 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2849 unit: public URISource() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/URISource.java start line: 29 end line: 30 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2850 unit: public DisputeEvent() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEvent.java start line: 31 end line: 32 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2851 unit: public DisputeEventDetails() file: taverna-workflowmodel-impl/src/main/java/org/apache/taverna/annotation/impl/DisputeEventDetails.java start line: 25 end line: 26 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2852 unit: public StackTraceElementBeanImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/StackTraceElementBeanImpl.java start line: 37 end line: 39 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2853 unit: public TranslationPath() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/TranslationPath.java start line: 48 end line: 49 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2854 unit: public ReferenceSetImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/ReferenceSetImpl.java start line: 79 end line: 81 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2855 unit: public void addEntity() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/EmptyReferenceContext.java start line: 43 end line: 44 size: 2 LOC McCabe index: 1 number of parameters: 1 id: 2856 unit: public T2ReferenceImpl() file: taverna-reference-impl/src/main/java/org/apache/taverna/reference/impl/T2ReferenceImpl.java start line: 58 end line: 60 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2857 unit: public UsernamePassword() file: taverna-credential-manager-api/src/main/java/org/apache/taverna/security/credentialmanager/UsernamePassword.java start line: 42 end line: 43 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2858 unit: public void resultTokenProduced() file: taverna-execution-local/src/main/java/org/apache/taverna/platform/execution/impl/local/LocalExecution.java start line: 242 end line: 243 size: 2 LOC McCabe index: 1 number of parameters: 2 id: 2859 unit: public ProvenanceAnalysis() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceAnalysis.java start line: 84 end line: 85 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2860 unit: public ProcessType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessType.java start line: 33 end line: 34 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2861 unit: public IterationType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/IterationType.java start line: 31 end line: 32 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2862 unit: public PortType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortType.java start line: 32 end line: 33 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2863 unit: public ProcessorType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ProcessorType.java start line: 31 end line: 32 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2864 unit: public DataDocumentType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/DataDocumentType.java start line: 31 end line: 32 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2865 unit: public ActivityType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/ActivityType.java start line: 33 end line: 34 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2866 unit: public PortsSequenceType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/PortsSequenceType.java start line: 29 end line: 30 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2867 unit: public LiteralType() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/types/LiteralType.java start line: 29 end line: 30 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2868 unit: public ProvenanceProcessor() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/ProvenanceProcessor.java start line: 36 end line: 37 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2869 unit: public PortBinding() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/utils/PortBinding.java start line: 36 end line: 37 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2870 unit: public void closeCurrentModel() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/ProvenanceWriter.java start line: 73 end line: 75 size: 2 LOC McCabe index: 1 number of parameters: 0 id: 2871 unit: protected VisitReport() file: taverna-workflowmodel-api/src/main/java/org/apache/taverna/visit/VisitReport.java start line: 114 end line: 114 size: 1 LOC McCabe index: 1 number of parameters: 0 id: 2872 unit: public Provenance() file: taverna-provenanceconnector/src/main/java/org/apache/taverna/provenance/lineageservice/Provenance.java start line: 70 end line: 70 size: 1 LOC McCabe index: 1 number of parameters: 0