Path	Lines of Code
taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java	486
taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java	37
taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java	88
taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java	512
taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java	169
taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java	315
taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java	449
taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java	117
taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/RoValidator.java	80
taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java	149
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java	117
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java	129
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java	616
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java	207
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java	110
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java	130
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java	157
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java	137
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java	220
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java	506
taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java	194
taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java	214
taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java	71
taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java	50
taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java	20
taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java	149
taverna-scufl2-examples/src/main/ruby/processors.rb	57
taverna-scufl2-schemas/src/main/resources/org/apache/taverna/scufl2/rdf/taverna-2.2.ttl	124
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java	357
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java	72
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/ApiConsumerExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BeanshellExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomartExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomobyExtensionParser.java	29
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/LocalExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/RshellExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/SoaplabExtensionParser.java	27
taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/WsdlExtensionParser.java	26
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java	1032
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java	126
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java	151
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BeanshellActivityParser.java	105
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomobyActivityParser.java	38
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/RshellActivityParser.java	125
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java	90
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java	241
taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/XPathActivityParser.java	82
taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java	524
taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java	1198
taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java	278
taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java	675
taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java	129
taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java	190
taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java	285
taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescReader.java	44
taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java	255
taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java	48
taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java	226
taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/stats/GetWfStat.java	127