id: 1
unit: protected void parseLine()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 113
end line: 326
size: 195 LOC
McCabe index: 40
number of parameters: 1

id: 2
unit: public void readTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 184
end line: 423
size: 182 LOC
McCabe index: 46
number of parameters: 3

id: 3
unit: public boolean visit()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 336
end line: 522
size: 173 LOC
McCabe index: 18
number of parameters: 1

id: 4
unit: protected OntModel save()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 96
end line: 310
size: 157 LOC
McCabe index: 29
number of parameters: 1

id: 5
unit: protected String bundleString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 102
end line: 251
size: 134 LOC
McCabe index: 23
number of parameters: 1

id: 6
unit: public URI uriForBean()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java
start line: 141
end line: 248
size: 102 LOC
McCabe index: 23
number of parameters: 1

id: 7
unit: public void parseAnnotations()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 653
end line: 758
size: 91 LOC
McCabe index: 19
number of parameters: 2

id: 8
unit: private void findAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 343
end line: 451
size: 90 LOC
McCabe index: 25
number of parameters: 0

id: 9
unit: public boolean visit()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DispatchingVisitor.java
start line: 77
end line: 168
size: 88 LOC
McCabe index: 43
number of parameters: 0

id: 10
unit: public static Object resolve()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 560
end line: 654
size: 87 LOC
McCabe index: 34
number of parameters: 2

id: 11
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/RshellActivityParser.java
start line: 82
end line: 214
size: 85 LOC
McCabe index: 16
number of parameters: 3

id: 12
unit: public String getManifestAsString()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1156
end line: 1244
size: 82 LOC
McCabe index: 14
number of parameters: 0

id: 13
unit: public void populateFromBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 294
end line: 373
size: 68 LOC
McCabe index: 11
number of parameters: 0

id: 14
unit: public void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1036
end line: 1110
size: 68 LOC
McCabe index: 23
number of parameters: 3

id: 15
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/RESTActivityParser.java
start line: 82
end line: 157
size: 68 LOC
McCabe index: 16
number of parameters: 3

id: 16
unit: protected ObjectNode parseToolDescription()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 300
end line: 441
size: 68 LOC
McCabe index: 11
number of parameters: 3

id: 17
unit: public void read()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/stats/GetWfStat.java
start line: 73
end line: 158
size: 64 LOC
McCabe index: 18
number of parameters: 1

id: 18
unit: public Map process()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 230
end line: 338
size: 63 LOC
McCabe index: 23
number of parameters: 1

id: 19
unit: public void readManifestXML()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 497
end line: 567
size: 62 LOC
McCabe index: 16
number of parameters: 0

id: 20
unit: public void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 820
end line: 887
size: 61 LOC
McCabe index: 19
number of parameters: 3

id: 21
unit: public ProcessorSplit splitProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 415
end line: 480
size: 61 LOC
McCabe index: 15
number of parameters: 2

id: 22
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 117
end line: 202
size: 60 LOC
McCabe index: 9
number of parameters: 3

id: 23
unit: private Revision parse()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java
start line: 86
end line: 156
size: 60 LOC
McCabe index: 14
number of parameters: 3

id: 24
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BeanshellActivityParser.java
start line: 78
end line: 153
size: 57 LOC
McCabe index: 11
number of parameters: 3

id: 25
unit: protected WorkflowBundle parseWorkflowBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java
start line: 76
end line: 134
size: 56 LOC
McCabe index: 11
number of parameters: 2

id: 26
unit: public void startElement()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1576
end line: 1628
size: 53 LOC
McCabe index: 12
number of parameters: 4

id: 27
unit: public InputSource resolveEntity()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1699
end line: 1754
size: 53 LOC
McCabe index: 16
number of parameters: 2

id: 28
unit: public WorkflowBundle readWorkflowBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java
start line: 192
end line: 259
size: 53 LOC
McCabe index: 8
number of parameters: 2

id: 29
unit: protected void parseConfiguration()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 130
end line: 195
size: 51 LOC
McCabe index: 12
number of parameters: 1

id: 30
unit: public void service()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ServiceTypes.java
start line: 56
end line: 110
size: 49 LOC
McCabe index: 11
number of parameters: 0

id: 31
unit: protected UCFPackage makeUCFPackage()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 84
end line: 141
size: 48 LOC
McCabe index: 8
number of parameters: 1

id: 32
unit: protected static void safeMoveOrCopy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 246
end line: 312
size: 47 LOC
McCabe index: 12
number of parameters: 3

id: 33
unit: public Annotation createNewAnnotation()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 152
end line: 207
size: 46 LOC
McCabe index: 6
number of parameters: 4

id: 34
unit: public static FileTime literalAsFileTime()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RDFUtils.java
start line: 44
end line: 117
size: 45 LOC
McCabe index: 12
number of parameters: 1

id: 35
unit: public Set processSteps()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 115
end line: 165
size: 44 LOC
McCabe index: 8
number of parameters: 1

id: 36
unit: protected void parseActivityOutputMap()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 588
end line: 634
size: 43 LOC
McCabe index: 7
number of parameters: 1

id: 37
unit: public Workflow convertWorkflowProcess()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 186
end line: 233
size: 43 LOC
McCabe index: 7
number of parameters: 2

id: 38
unit: private static String nameForAgent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 197
end line: 238
size: 42 LOC
McCabe index: 2
number of parameters: 1

id: 39
unit: private void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 561
end line: 613
size: 42 LOC
McCabe index: 8
number of parameters: 2

id: 40
unit: protected Set parseDatalinks()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 877
end line: 924
size: 42 LOC
McCabe index: 9
number of parameters: 1

id: 41
unit: public void readManifestXML()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java
start line: 201
end line: 242
size: 41 LOC
McCabe index: 13
number of parameters: 0

id: 42
unit: public Dataset annotationDatasetFor()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 67
end line: 111
size: 41 LOC
McCabe index: 7
number of parameters: 1

id: 43
unit: private ProcessorCheckStatus checkProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 192
end line: 238
size: 41 LOC
McCabe index: 8
number of parameters: 0

id: 44
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java
start line: 89
end line: 137
size: 39 LOC
McCabe index: 5
number of parameters: 3

id: 45
unit: protected void prepareContainerXML()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 198
end line: 250
size: 38 LOC
McCabe index: 12
number of parameters: 0

id: 46
unit: public void setRootFile()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 460
end line: 504
size: 38 LOC
McCabe index: 10
number of parameters: 2

id: 47
unit: protected void parseActivityInputMap()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 545
end line: 586
size: 38 LOC
McCabe index: 6
number of parameters: 1

id: 48
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SpreadsheetActivityParser.java
start line: 65
end line: 110
size: 38 LOC
McCabe index: 9
number of parameters: 3

id: 49
unit: protected void parseWorkflow()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 281
end line: 322
size: 38 LOC
McCabe index: 10
number of parameters: 2

id: 50
unit: void parseManifest()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 720
end line: 766
size: 37 LOC
McCabe index: 4
number of parameters: 0

id: 51
unit: protected void parseDispatchStack()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 944
end line: 999
size: 37 LOC
McCabe index: 9
number of parameters: 1

id: 52
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 226
end line: 262
size: 37 LOC
McCabe index: 11
number of parameters: 0

id: 53
unit: public String probeContentType()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileTypeDetector.java
start line: 45
end line: 88
size: 36 LOC
McCabe index: 9
number of parameters: 1

id: 54
unit: public String validate()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/validate/Validate.java
start line: 80
end line: 129
size: 36 LOC
McCabe index: 6
number of parameters: 2

id: 55
unit: protected Revision parseIdentificationAnnotations()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 786
end line: 822
size: 36 LOC
McCabe index: 10
number of parameters: 1

id: 56
unit: protected void readProfile()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 317
end line: 355
size: 36 LOC
McCabe index: 12
number of parameters: 3

id: 57
unit: private void checkProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 109
end line: 161
size: 36 LOC
McCabe index: 8
number of parameters: 0

id: 58
unit: public Path createManifestXML()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java
start line: 159
end line: 199
size: 35 LOC
McCabe index: 7
number of parameters: 0

id: 59
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 294
end line: 331
size: 35 LOC
McCabe index: 7
number of parameters: 4

id: 60
unit: protected SenderPort findSenderPort()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 268
end line: 302
size: 35 LOC
McCabe index: 9
number of parameters: 2

id: 61
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLActivityParser.java
start line: 63
end line: 103
size: 35 LOC
McCabe index: 8
number of parameters: 3

id: 62
unit: private void parseAnnotations()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java
start line: 145
end line: 189
size: 35 LOC
McCabe index: 7
number of parameters: 1

id: 63
unit: private void initialize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 372
end line: 417
size: 34 LOC
McCabe index: 8
number of parameters: 1

id: 64
unit: protected Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 442
end line: 482
size: 34 LOC
McCabe index: 8
number of parameters: 1

id: 65
unit: public WorkflowBundle parseT2Flow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1165
end line: 1201
size: 33 LOC
McCabe index: 6
number of parameters: 1

id: 66
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ApiConsomerActivityParser.java
start line: 58
end line: 98
size: 33 LOC
McCabe index: 4
number of parameters: 3

id: 67
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 59
end line: 95
size: 33 LOC
McCabe index: 11
number of parameters: 1

id: 68
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 59
end line: 94
size: 33 LOC
McCabe index: 11
number of parameters: 1

id: 69
unit: public void visitProcessorBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 426
end line: 462
size: 33 LOC
McCabe index: 14
number of parameters: 1

id: 70
unit: public InputStream getInputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1379
end line: 1415
size: 32 LOC
McCabe index: 3
number of parameters: 0

id: 71
unit: protected ReceiverPort findReceiverPort()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 235
end line: 266
size: 32 LOC
McCabe index: 8
number of parameters: 2

id: 72
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/XPathActivityParser.java
start line: 80
end line: 122
size: 32 LOC
McCabe index: 3
number of parameters: 3

id: 73
unit: public WorkflowBean resolveUri()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java
start line: 95
end line: 139
size: 32 LOC
McCabe index: 9
number of parameters: 2

id: 74
unit: public boolean convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 98
end line: 143
size: 31 LOC
McCabe index: 9
number of parameters: 0

id: 75
unit: public void visitProcessorInputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 465
end line: 496
size: 31 LOC
McCabe index: 11
number of parameters: 1

id: 76
unit: private void initialize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 333
end line: 369
size: 30 LOC
McCabe index: 6
number of parameters: 1

id: 77
unit: protected void parseProcessor()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 242
end line: 272
size: 30 LOC
McCabe index: 6
number of parameters: 1

id: 78
unit: public static Process createProcess()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/ProcessFactory.java
start line: 29
end line: 63
size: 30 LOC
McCabe index: 8
number of parameters: 1

id: 79
unit: public void save()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 312
end line: 345
size: 29 LOC
McCabe index: 3
number of parameters: 2

id: 80
unit: public void convertFile()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 164
end line: 203
size: 29 LOC
McCabe index: 4
number of parameters: 2

id: 81
unit: protected void parseActivityBinding()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 393
end line: 428
size: 29 LOC
McCabe index: 3
number of parameters: 2

id: 82
unit: public Unmarshaller getUnmarshaller()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 503
end line: 533
size: 29 LOC
McCabe index: 8
number of parameters: 0

id: 83
unit: public void removePortsBindingForUnknownPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 784
end line: 813
size: 29 LOC
McCabe index: 7
number of parameters: 1

id: 84
unit: Integer calculateResultWrappingDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 240
end line: 276
size: 29 LOC
McCabe index: 6
number of parameters: 1

id: 85
unit: public ValidationReport check()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/RoValidator.java
start line: 108
end line: 157
size: 28 LOC
McCabe index: 11
number of parameters: 0

id: 86
unit: private OmexManifest makeOmexManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 453
end line: 489
size: 28 LOC
McCabe index: 7
number of parameters: 0

id: 87
unit: private List getAgents()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 125
end line: 157
size: 28 LOC
McCabe index: 11
number of parameters: 3

id: 88
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/InteractionActivityParser.java
start line: 60
end line: 93
size: 28 LOC
McCabe index: 3
number of parameters: 3

id: 89
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 119
end line: 152
size: 28 LOC
McCabe index: 4
number of parameters: 2

id: 90
unit: public Unmarshaller getUnmarshaller()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 381
end line: 412
size: 28 LOC
McCabe index: 8
number of parameters: 0

id: 91
unit: public void parseDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 138
end line: 166
size: 28 LOC
McCabe index: 7
number of parameters: 1

id: 92
unit: public void parseDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 157
end line: 185
size: 28 LOC
McCabe index: 7
number of parameters: 1

id: 93
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 103
end line: 130
size: 28 LOC
McCabe index: 13
number of parameters: 1

id: 94
unit: public Integer getDotProductIterationDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 327
end line: 358
size: 28 LOC
McCabe index: 6
number of parameters: 2

id: 95
unit: public String guessMediaType()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 263
end line: 292
size: 27 LOC
McCabe index: 14
number of parameters: 1

id: 96
unit: public SeekableByteChannel newByteChannel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 522
end line: 567
size: 27 LOC
McCabe index: 9
number of parameters: 3

id: 97
unit: public void show()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 65
end line: 95
size: 27 LOC
McCabe index: 5
number of parameters: 0

id: 98
unit: protected IterationStrategyNode parseIterationStrategyNode()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1053
end line: 1080
size: 27 LOC
McCabe index: 5
number of parameters: 1

id: 99
unit: public Marshaller getMarshaller()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 641
end line: 669
size: 27 LOC
McCabe index: 4
number of parameters: 0

id: 100
unit: private void parsePort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 344
end line: 370
size: 27 LOC
McCabe index: 7
number of parameters: 2

id: 101
unit: protected boolean getJarDoubleEscaping()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 425
end line: 473
size: 26 LOC
McCabe index: 5
number of parameters: 0

id: 102
unit: public void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 992
end line: 1021
size: 26 LOC
McCabe index: 5
number of parameters: 3

id: 103
unit: protected void readWorkflow()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 350
end line: 380
size: 26 LOC
McCabe index: 5
number of parameters: 2

id: 104
unit: private ObjectNode convertProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 128
end line: 155
size: 26 LOC
McCabe index: 4
number of parameters: 1

id: 105
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 141
end line: 167
size: 26 LOC
McCabe index: 13
number of parameters: 1

id: 106
unit: public void visitDataLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 233
end line: 263
size: 26 LOC
McCabe index: 12
number of parameters: 1

id: 107
unit: public BundleFileSystem newFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 617
end line: 644
size: 25 LOC
McCabe index: 5
number of parameters: 2

id: 108
unit: protected ObjectNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 212
end line: 243
size: 25 LOC
McCabe index: 4
number of parameters: 1

id: 109
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 347
end line: 374
size: 25 LOC
McCabe index: 4
number of parameters: 3

id: 110
unit: public Source resolve()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1757
end line: 1783
size: 25 LOC
McCabe index: 5
number of parameters: 2

id: 111
unit: protected Set parseProcessors()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1122
end line: 1147
size: 25 LOC
McCabe index: 3
number of parameters: 1

id: 112
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/RetryParser.java
start line: 74
end line: 106
size: 25 LOC
McCabe index: 12
number of parameters: 3

id: 113
unit: private void createDefaultProcessorBinding()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 269
end line: 294
size: 25 LOC
McCabe index: 3
number of parameters: 0

id: 114
unit: public static  Stream resolveAsStream()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 684
end line: 712
size: 25 LOC
McCabe index: 7
number of parameters: 2

id: 115
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 100
end line: 124
size: 25 LOC
McCabe index: 13
number of parameters: 1

id: 116
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 373
end line: 399
size: 25 LOC
McCabe index: 9
number of parameters: 2

id: 117
unit: public URI relativePath()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java
start line: 56
end line: 87
size: 25 LOC
McCabe index: 7
number of parameters: 2

id: 118
unit: public void visitProcessorOutputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 499
end line: 524
size: 25 LOC
McCabe index: 11
number of parameters: 1

id: 119
unit: public OutputStream insertOutputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1445
end line: 1469
size: 24 LOC
McCabe index: 5
number of parameters: 2

id: 120
unit: protected IterationStrategyStack parseIterationStrategyStack()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1026
end line: 1051
size: 24 LOC
McCabe index: 7
number of parameters: 1

id: 121
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLXMLSplitterParser.java
start line: 71
end line: 101
size: 24 LOC
McCabe index: 3
number of parameters: 3

id: 122
unit: protected void parseProcessorBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 251
end line: 279
size: 24 LOC
McCabe index: 5
number of parameters: 1

id: 123
unit: private static Resource mboxForAgent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 173
end line: 195
size: 23 LOC
McCabe index: 2
number of parameters: 1

id: 124
unit: protected URI baseURIFor()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 323
end line: 346
size: 23 LOC
McCabe index: 5
number of parameters: 1

id: 125
unit: protected ObjectNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 145
end line: 168
size: 23 LOC
McCabe index: 6
number of parameters: 1

id: 126
unit: public void close()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 660
end line: 684
size: 23 LOC
McCabe index: 4
number of parameters: 0

id: 127
unit: private Set parseControlLinks()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 848
end line: 875
size: 23 LOC
McCabe index: 6
number of parameters: 1

id: 128
unit: protected Set parseInputPorts()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1001
end line: 1024
size: 23 LOC
McCabe index: 4
number of parameters: 1

id: 129
unit: protected ObjectNode parseAndAddOutputPortDefinition()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 110
end line: 144
size: 23 LOC
McCabe index: 3
number of parameters: 3

id: 130
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SoaplabActivityParser.java
start line: 59
end line: 88
size: 23 LOC
McCabe index: 5
number of parameters: 3

id: 131
unit: private void configuration()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 125
end line: 154
size: 23 LOC
McCabe index: 2
number of parameters: 1

id: 132
unit: private Iterable nodeIterable()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 76
end line: 101
size: 23 LOC
McCabe index: 1
number of parameters: 1

id: 133
unit: protected void parseActivity()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 103
end line: 126
size: 23 LOC
McCabe index: 5
number of parameters: 1

id: 134
unit: def parse()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 23 LOC
McCabe index: 4
number of parameters: 1

id: 135
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 328
end line: 351
size: 23 LOC
McCabe index: 4
number of parameters: 2

id: 136
unit: public Configuration setAsNestedWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 756
end line: 782
size: 23 LOC
McCabe index: 5
number of parameters: 3

id: 137
unit: private static List creatingAgentsFor()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 138
end line: 160
size: 22 LOC
McCabe index: 2
number of parameters: 1

id: 138
unit: protected JsonNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 170
end line: 192
size: 22 LOC
McCabe index: 4
number of parameters: 1

id: 139
unit: private String ensureValidPackagePath()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 771
end line: 793
size: 22 LOC
McCabe index: 5
number of parameters: 1

id: 140
unit: protected Map listResources()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 355
end line: 382
size: 22 LOC
McCabe index: 9
number of parameters: 2

id: 141
unit: protected ObjectNode parseAndAddInputPortDefinition()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 163
end line: 203
size: 22 LOC
McCabe index: 3
number of parameters: 3

id: 142
unit: private Iterable elementIter()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 266
end line: 290
size: 22 LOC
McCabe index: 1
number of parameters: 1

id: 143
unit: private Set processStepInput()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 167
end line: 193
size: 22 LOC
McCabe index: 6
number of parameters: 1

id: 144
unit: public static ErrorDocument getError()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 181
end line: 208
size: 22 LOC
McCabe index: 7
number of parameters: 1

id: 145
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 119
end line: 143
size: 22 LOC
McCabe index: 6
number of parameters: 1

id: 146
unit: protected ProcessorPortBinding processorPortBindingForPortInternal()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 299
end line: 320
size: 22 LOC
McCabe index: 5
number of parameters: 2

id: 147
unit: public void bindActivityToProcessorByMatchingPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 714
end line: 736
size: 22 LOC
McCabe index: 7
number of parameters: 1

id: 148
unit: public void visitWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 590
end line: 616
size: 22 LOC
McCabe index: 9
number of parameters: 1

id: 149
unit: public void clearWorkflowData()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 162
end line: 183
size: 22 LOC
McCabe index: 7
number of parameters: 0

id: 150
unit: private void checkWorkflowOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 163
end line: 190
size: 22 LOC
McCabe index: 5
number of parameters: 0

id: 151
unit: public void validate()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/RoValidator.java
start line: 83
end line: 106
size: 21 LOC
McCabe index: 5
number of parameters: 0

id: 152
unit: public static void copyRecursively()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 65
end line: 87
size: 21 LOC
McCabe index: 7
number of parameters: 3

id: 153
unit: private URI pathOnly()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 122
end line: 146
size: 21 LOC
McCabe index: 6
number of parameters: 1

id: 154
unit: public DirectoryStream newDirectoryStream()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 570
end line: 591
size: 21 LOC
McCabe index: 1
number of parameters: 2

id: 155
unit: public void createdir()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 74
end line: 95
size: 21 LOC
McCabe index: 4
number of parameters: 0

id: 156
unit: public void runcommand()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 223
end line: 245
size: 21 LOC
McCabe index: 9
number of parameters: 0

id: 157
unit: private void entryUpdate()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 689
end line: 715
size: 21 LOC
McCabe index: 6
number of parameters: 1

id: 158
unit: public Document getDom()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 915
end line: 947
size: 21 LOC
McCabe index: 3
number of parameters: 1

id: 159
unit: private Map getPredicatesForClass()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 760
end line: 784
size: 21 LOC
McCabe index: 3
number of parameters: 0

id: 160
unit: public String getPreferredPrefix()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/impl/NamespacePrefixMapperJAXB_RI.java
start line: 28
end line: 48
size: 21 LOC
McCabe index: 8
number of parameters: 3

id: 161
unit: public boolean visit()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 262
end line: 282
size: 21 LOC
McCabe index: 9
number of parameters: 1

id: 162
unit: private Map processdetails()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 349
end line: 373
size: 21 LOC
McCabe index: 6
number of parameters: 1

id: 163
unit: public void visitBlockingControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 150
end line: 176
size: 21 LOC
McCabe index: 10
number of parameters: 1

id: 164
unit: public void visitPortNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 385
end line: 407
size: 21 LOC
McCabe index: 9
number of parameters: 1

id: 165
unit: public static String isTrue()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 104
end line: 127
size: 20 LOC
McCabe index: 7
number of parameters: 0

id: 166
unit: protected void prepareAndSave()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 173
end line: 196
size: 20 LOC
McCabe index: 5
number of parameters: 1

id: 167
unit: private PipedInputStream copyToOutputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 620
end line: 639
size: 20 LOC
McCabe index: 2
number of parameters: 1

id: 168
unit: private Calendar parseDate()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 824
end line: 846
size: 20 LOC
McCabe index: 3
number of parameters: 1

id: 169
unit: public Map readRevisionChain()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java
start line: 63
end line: 84
size: 20 LOC
McCabe index: 4
number of parameters: 2

id: 170
unit: private Set processStepOutput()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 195
end line: 219
size: 20 LOC
McCabe index: 6
number of parameters: 1

id: 171
unit: def parse_all_graphs()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 20 LOC
McCabe index: 8
number of parameters: 2

id: 172
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 92
end line: 111
size: 20 LOC
McCabe index: 10
number of parameters: 1

id: 173
unit: public  T cloneIfNotInCache()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 112
end line: 135
size: 20 LOC
McCabe index: 6
number of parameters: 1

id: 174
unit: public List nestedWorkflowsForProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 634
end line: 653
size: 20 LOC
McCabe index: 7
number of parameters: 2

id: 175
unit: public void visitIterationStrategyTopNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 316
end line: 335
size: 20 LOC
McCabe index: 9
number of parameters: 1

id: 176
unit: public Path writeAsJsonLD()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 471
end line: 491
size: 19 LOC
McCabe index: 2
number of parameters: 0

id: 177
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 277
end line: 298
size: 19 LOC
McCabe index: 5
number of parameters: 0

id: 178
unit: private OdfPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 183
end line: 205
size: 19 LOC
McCabe index: 3
number of parameters: 0

id: 179
unit: public List getRootFiles()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 524
end line: 544
size: 19 LOC
McCabe index: 7
number of parameters: 0

id: 180
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/StringConstantExtensionParser.java
start line: 70
end line: 90
size: 19 LOC
McCabe index: 1
number of parameters: 1

id: 181
unit: public static void setWorkflowBundle()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 388
end line: 411
size: 19 LOC
McCabe index: 3
number of parameters: 2

id: 182
unit: public int compareTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 98
end line: 120
size: 19 LOC
McCabe index: 5
number of parameters: 1

id: 183
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 288
end line: 306
size: 19 LOC
McCabe index: 4
number of parameters: 2

id: 184
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 218
end line: 236
size: 19 LOC
McCabe index: 3
number of parameters: 2

id: 185
unit: public void workflowHistory()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/ROEvoSerializer.java
start line: 41
end line: 64
size: 18 LOC
McCabe index: 2
number of parameters: 2

id: 186
unit: public static URI getReference()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 156
end line: 178
size: 18 LOC
McCabe index: 6
number of parameters: 1

id: 187
unit: public static void setMimeType()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 314
end line: 336
size: 18 LOC
McCabe index: 6
number of parameters: 2

id: 188
unit: public void setAggregates()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 381
end line: 399
size: 18 LOC
McCabe index: 5
number of parameters: 1

id: 189
unit: public void writefile()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/stats/GetWfStat.java
start line: 162
end line: 183
size: 18 LOC
McCabe index: 3
number of parameters: 2

id: 190
unit: private void parseMimeTypes()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 205
end line: 226
size: 18 LOC
McCabe index: 8
number of parameters: 2

id: 191
unit: private Workflow parseWorkflow()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 176
end line: 196
size: 18 LOC
McCabe index: 1
number of parameters: 1

id: 192
unit: public Processor convertStepToProcessor()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 74
end line: 94
size: 18 LOC
McCabe index: 3
number of parameters: 1

id: 193
unit: public static List getList()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 221
end line: 240
size: 18 LOC
McCabe index: 6
number of parameters: 1

id: 194
unit: public void setName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 154
end line: 175
size: 18 LOC
McCabe index: 5
number of parameters: 1

id: 195
unit: public void visitWorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 619
end line: 638
size: 18 LOC
McCabe index: 10
number of parameters: 1

id: 196
unit: public Integer getIterationDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 299
end line: 318
size: 18 LOC
McCabe index: 4
number of parameters: 2

id: 197
unit: private Integer getCrossProductIterationDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 360
end line: 379
size: 18 LOC
McCabe index: 4
number of parameters: 2

id: 198
unit: public FileVisitResult postVisitDirectory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 149
end line: 169
size: 17 LOC
McCabe index: 3
number of parameters: 2

id: 199
unit: protected Manifest readOrPopulateManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 109
end line: 128
size: 17 LOC
McCabe index: 4
number of parameters: 0

id: 200
unit: protected void treeModelAsString()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 151
end line: 167
size: 17 LOC
McCabe index: 3
number of parameters: 4

id: 201
unit: protected JsonNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 194
end line: 210
size: 17 LOC
McCabe index: 4
number of parameters: 1

id: 202
unit: public InputStream getInputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1340
end line: 1370
size: 17 LOC
McCabe index: 8
number of parameters: 1

id: 203
unit: protected void parseContainerXML()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 122
end line: 139
size: 17 LOC
McCabe index: 3
number of parameters: 0

id: 204
unit: protected void parseDispatchStack()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 926
end line: 942
size: 17 LOC
McCabe index: 2
number of parameters: 1

id: 205
unit: public  ConfigType unmarshallConfig()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 63
end line: 79
size: 17 LOC
McCabe index: 5
number of parameters: 4

id: 206
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/StringConstantActivityParser.java
start line: 61
end line: 78
size: 17 LOC
McCabe index: 2
number of parameters: 3

id: 207
unit: private void processorBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 202
end line: 219
size: 17 LOC
McCabe index: 2
number of parameters: 1

id: 208
unit: protected void parseIterationStrategyStack()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 200
end line: 217
size: 17 LOC
McCabe index: 2
number of parameters: 1

id: 209
unit: public int compare()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/IterableComparator.java
start line: 70
end line: 91
size: 17 LOC
McCabe index: 7
number of parameters: 2

id: 210
unit: protected ProcessorPortBinding processorPortBindingInternalInBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 322
end line: 339
size: 17 LOC
McCabe index: 7
number of parameters: 2

id: 211
unit: protected static void setPrefixMapper()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFJaxb.java
start line: 91
end line: 117
size: 16 LOC
McCabe index: 4
number of parameters: 1

id: 212
unit: protected static void setPrefixMapper()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 272
end line: 298
size: 16 LOC
McCabe index: 4
number of parameters: 1

id: 213
unit: public PathMetadata getAggregation()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 133
end line: 148
size: 16 LOC
McCabe index: 4
number of parameters: 1

id: 214
unit: protected void close()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 55
end line: 77
size: 16 LOC
McCabe index: 6
number of parameters: 1

id: 215
unit: protected static void addMimeTypeToZip()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 205
end line: 226
size: 16 LOC
McCabe index: 2
number of parameters: 2

id: 216
unit: protected Path findSource()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 66
end line: 82
size: 16 LOC
McCabe index: 3
number of parameters: 0

id: 217
unit: protected Iterator wrapIterator()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 218
end line: 235
size: 16 LOC
McCabe index: 1
number of parameters: 1

id: 218
unit: public GetWfStat()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/stats/GetWfStat.java
start line: 50
end line: 69
size: 16 LOC
McCabe index: 4
number of parameters: 3

id: 219
unit: public void parse()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 104
end line: 123
size: 16 LOC
McCabe index: 4
number of parameters: 4

id: 220
unit: private URI mapTypeFromRaven()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 355
end line: 370
size: 16 LOC
McCabe index: 3
number of parameters: 2

id: 221
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ComponentActivityParser.java
start line: 58
end line: 77
size: 16 LOC
McCabe index: 2
number of parameters: 3

id: 222
unit: protected void setPrefixMapper()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 788
end line: 814
size: 16 LOC
McCabe index: 4
number of parameters: 1

id: 223
unit: protected void parseDataLink()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 115
end line: 131
size: 16 LOC
McCabe index: 2
number of parameters: 1

id: 224
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLReader.java
start line: 64
end line: 79
size: 16 LOC
McCabe index: 5
number of parameters: 1

id: 225
unit: public Set parseInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLParser.java
start line: 43
end line: 60
size: 16 LOC
McCabe index: 4
number of parameters: 0

id: 226
unit: public void writeWorkflowToFile()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 104
end line: 119
size: 16 LOC
McCabe index: 3
number of parameters: 1

id: 227
unit: public WorkflowBundle createBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 521
end line: 539
size: 16 LOC
McCabe index: 1
number of parameters: 0

id: 228
unit: public void setParents()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 341
end line: 356
size: 16 LOC
McCabe index: 3
number of parameters: 1

id: 229
unit: public void annotateT2flows()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescAgent.java
start line: 65
end line: 83
size: 15 LOC
McCabe index: 2
number of parameters: 0

id: 230
unit: private Collection bundleSubjects()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 310
end line: 325
size: 15 LOC
McCabe index: 5
number of parameters: 0

id: 231
unit: public List getAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 162
end line: 177
size: 15 LOC
McCabe index: 2
number of parameters: 1

id: 232
unit: public BundleFileSystem getFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 409
end line: 423
size: 15 LOC
McCabe index: 3
number of parameters: 1

id: 233
unit: public URI toUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 210
end line: 225
size: 15 LOC
McCabe index: 4
number of parameters: 0

id: 234
unit: private void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1113
end line: 1127
size: 15 LOC
McCabe index: 5
number of parameters: 2

id: 235
unit: public void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 155
end line: 171
size: 15 LOC
McCabe index: 6
number of parameters: 1

id: 236
unit: protected RootFiles getRootFiles()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 506
end line: 521
size: 15 LOC
McCabe index: 4
number of parameters: 1

id: 237
unit: public void unsetRootFile()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 554
end line: 568
size: 15 LOC
McCabe index: 5
number of parameters: 1

id: 238
unit: protected Workflow parseDataflow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 636
end line: 651
size: 15 LOC
McCabe index: 2
number of parameters: 2

id: 239
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/DataflowActivityParser.java
start line: 62
end line: 77
size: 15 LOC
McCabe index: 2
number of parameters: 3

id: 240
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 80
end line: 94
size: 15 LOC
McCabe index: 3
number of parameters: 2

id: 241
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ParallelizeParser.java
start line: 67
end line: 82
size: 15 LOC
McCabe index: 4
number of parameters: 3

id: 242
unit: public WorkflowBundle parseScufl()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 158
end line: 174
size: 15 LOC
McCabe index: 1
number of parameters: 1

id: 243
unit: private void parseProcessor()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 251
end line: 267
size: 15 LOC
McCabe index: 2
number of parameters: 1

id: 244
unit: public Workflow buildWorkflow()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 82
end line: 102
size: 15 LOC
McCabe index: 1
number of parameters: 0

id: 245
unit: public void extractFormat()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 428
end line: 447
size: 15 LOC
McCabe index: 6
number of parameters: 2

id: 246
unit: public void figureOutFormats()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 459
end line: 478
size: 15 LOC
McCabe index: 4
number of parameters: 2

id: 247
unit: public static Path setError()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 307
end line: 322
size: 15 LOC
McCabe index: 2
number of parameters: 4

id: 248
unit: public static long getListSize()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 436
end line: 451
size: 15 LOC
McCabe index: 5
number of parameters: 1

id: 249
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 80
end line: 94
size: 15 LOC
McCabe index: 4
number of parameters: 1

id: 250
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 252
end line: 266
size: 15 LOC
McCabe index: 5
number of parameters: 1

id: 251
unit: protected boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 178
end line: 193
size: 15 LOC
McCabe index: 6
number of parameters: 2

id: 252
unit: public String validFilename()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java
start line: 250
end line: 267
size: 15 LOC
McCabe index: 3
number of parameters: 1

id: 253
unit: public void writeBundle()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescWriter.java
start line: 50
end line: 64
size: 14 LOC
McCabe index: 2
number of parameters: 3

id: 254
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescReader.java
start line: 63
end line: 82
size: 14 LOC
McCabe index: 5
number of parameters: 1

id: 255
unit: public Path createManifestXML()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 327
end line: 341
size: 14 LOC
McCabe index: 2
number of parameters: 0

id: 256
unit: public static BundleFileSystem newFileSystemFromExisting()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 251
end line: 279
size: 14 LOC
McCabe index: 2
number of parameters: 1

id: 257
unit: public Validate()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/validate/Validate.java
start line: 47
end line: 63
size: 14 LOC
McCabe index: 3
number of parameters: 3

id: 258
unit: public void saveToLog()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/validate/Validate.java
start line: 131
end line: 145
size: 14 LOC
McCabe index: 2
number of parameters: 1

id: 259
unit: public void rec_convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 147
end line: 161
size: 14 LOC
McCabe index: 4
number of parameters: 1

id: 260
unit: public ObjectNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 269
end line: 288
size: 14 LOC
McCabe index: 1
number of parameters: 1

id: 261
unit: public Enumeration entries()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1831
end line: 1845
size: 14 LOC
McCabe index: 3
number of parameters: 0

id: 262
unit: public void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 574
end line: 591
size: 14 LOC
McCabe index: 2
number of parameters: 1

id: 263
unit: protected void parseControlLink()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 70
end line: 85
size: 14 LOC
McCabe index: 1
number of parameters: 1

id: 264
unit: protected void parseCrossProduct()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 100
end line: 113
size: 14 LOC
McCabe index: 1
number of parameters: 1

id: 265
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 60
end line: 73
size: 14 LOC
McCabe index: 3
number of parameters: 2

id: 266
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 76
end line: 89
size: 14 LOC
McCabe index: 3
number of parameters: 2

id: 267
unit: public void parseProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 141
end line: 155
size: 14 LOC
McCabe index: 4
number of parameters: 1

id: 268
unit: public Set convertProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java
start line: 53
end line: 67
size: 14 LOC
McCabe index: 3
number of parameters: 1

id: 269
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 185
end line: 198
size: 14 LOC
McCabe index: 6
number of parameters: 1

id: 270
unit: public int compareTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 59
end line: 100
size: 14 LOC
McCabe index: 5
number of parameters: 1

id: 271
unit: public  T findParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 224
end line: 237
size: 14 LOC
McCabe index: 4
number of parameters: 2

id: 272
unit: public Processor createConstant()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 834
end line: 848
size: 14 LOC
McCabe index: 1
number of parameters: 3

id: 273
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 65
end line: 78
size: 14 LOC
McCabe index: 7
number of parameters: 1

id: 274
unit: public void visitAbstractGranularDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 124
end line: 137
size: 14 LOC
McCabe index: 7
number of parameters: 1

id: 275
unit: public void visitConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 200
end line: 220
size: 14 LOC
McCabe index: 6
number of parameters: 1

id: 276
unit: private void inheritDataLinkDepthsFromWorkflowInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 391
end line: 404
size: 14 LOC
McCabe index: 3
number of parameters: 0

id: 277
unit: public String getPreferredPrefix()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFJaxb.java
start line: 55
end line: 67
size: 13 LOC
McCabe index: 5
number of parameters: 3

id: 278
unit: private Set listObjectProperties()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 170
end line: 182
size: 13 LOC
McCabe index: 4
number of parameters: 2

id: 279
unit: public FileVisitResult preVisitDirectory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 172
end line: 188
size: 13 LOC
McCabe index: 4
number of parameters: 2

id: 280
unit: public XMLReader newXMLReader()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 69
end line: 89
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 281
unit: public void remove()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1482
end line: 1494
size: 13 LOC
McCabe index: 11
number of parameters: 1

id: 282
unit: public InputStream getInputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1848
end line: 1861
size: 13 LOC
McCabe index: 4
number of parameters: 1

id: 283
unit: private InputStream readAsInputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1863
end line: 1875
size: 13 LOC
McCabe index: 3
number of parameters: 1

id: 284
unit: public OutputStream addResourceUsingOutputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 593
end line: 606
size: 13 LOC
McCabe index: 4
number of parameters: 2

id: 285
unit: public  ConfigType unmarshallElement()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 81
end line: 93
size: 13 LOC
McCabe index: 2
number of parameters: 3

id: 286
unit: public  ConfigType unmarshallXml()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 95
end line: 108
size: 13 LOC
McCabe index: 2
number of parameters: 3

id: 287
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 165
end line: 181
size: 13 LOC
McCabe index: 5
number of parameters: 1

id: 288
unit: public  T getCurrent()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 49
end line: 62
size: 13 LOC
McCabe index: 6
number of parameters: 1

id: 289
unit: private void outputActivityPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 178
end line: 191
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 290
unit: private void processorInputPortBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 221
end line: 233
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 291
unit: private void processorOutputPortBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 235
end line: 247
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 292
unit: protected  T resolveBeanUri()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 98
end line: 110
size: 13 LOC
McCabe index: 3
number of parameters: 2

id: 293
unit: protected void parseDotProduct()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 174
end line: 187
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 294
unit: protected void parsePortNode()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 228
end line: 240
size: 13 LOC
McCabe index: 2
number of parameters: 1

id: 295
unit: protected void processorOutputProcessorPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 335
end line: 347
size: 13 LOC
McCabe index: 3
number of parameters: 1

id: 296
unit: protected void parseInputPortBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 208
end line: 221
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 297
unit: protected void parseOutputPortBinding()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 236
end line: 249
size: 13 LOC
McCabe index: 1
number of parameters: 1

id: 298
unit: protected void parseProfile()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 281
end line: 297
size: 13 LOC
McCabe index: 3
number of parameters: 2

id: 299
unit: public Set parseOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLParser.java
start line: 62
end line: 76
size: 13 LOC
McCabe index: 3
number of parameters: 0

id: 300
unit: public boolean isValidArrayType()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 511
end line: 523
size: 13 LOC
McCabe index: 4
number of parameters: 1

id: 301
unit: private static Path anyExtension()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 123
end line: 150
size: 13 LOC
McCabe index: 4
number of parameters: 2

id: 302
unit: private void parseType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 382
end line: 394
size: 13 LOC
McCabe index: 3
number of parameters: 1

id: 303
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 132
end line: 144
size: 13 LOC
McCabe index: 3
number of parameters: 2

id: 304
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 109
end line: 121
size: 13 LOC
McCabe index: 5
number of parameters: 1

id: 305
unit: public UCFPackage getResources()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 135
end line: 147
size: 13 LOC
McCabe index: 3
number of parameters: 0

id: 306
unit: public String addWithUniqueName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 117
end line: 133
size: 13 LOC
McCabe index: 3
number of parameters: 1

id: 307
unit: public List controlLinksWaitingFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 188
end line: 200
size: 13 LOC
McCabe index: 4
number of parameters: 1

id: 308
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 76
end line: 88
size: 13 LOC
McCabe index: 5
number of parameters: 1

id: 309
unit: public void visitChild()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 179
end line: 192
size: 13 LOC
McCabe index: 7
number of parameters: 1

id: 310
unit: public void visitIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 301
end line: 313
size: 13 LOC
McCabe index: 7
number of parameters: 1

id: 311
unit: public void visitProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 537
end line: 551
size: 13 LOC
McCabe index: 7
number of parameters: 1

id: 312
unit: private String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 264
end line: 276
size: 13 LOC
McCabe index: 4
number of parameters: 2

id: 313
unit: public static Bundle openBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 213
end line: 224
size: 12 LOC
McCabe index: 3
number of parameters: 1

id: 314
unit: private static Model parseRDF()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 240
end line: 254
size: 12 LOC
McCabe index: 1
number of parameters: 1

id: 315
unit: public String toString()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 223
end line: 234
size: 12 LOC
McCabe index: 4
number of parameters: 0

id: 316
unit: protected static Model jsonLdAsJenaModel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 90
end line: 107
size: 12 LOC
McCabe index: 1
number of parameters: 2

id: 317
unit: protected static Path withoutSlash()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 193
end line: 204
size: 12 LOC
McCabe index: 5
number of parameters: 1

id: 318
unit: private void findProcessors()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 102
end line: 114
size: 12 LOC
McCabe index: 3
number of parameters: 3

id: 319
unit: protected void addPorts()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 108
end line: 121
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 320
unit: private static Cli parser()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 52
end line: 64
size: 12 LOC
McCabe index: 1
number of parameters: 0

id: 321
unit: public String getWay()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 138
end line: 151
size: 12 LOC
McCabe index: 3
number of parameters: 0

id: 322
unit: private void deleteDirectoryRecursive()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 70
end line: 82
size: 12 LOC
McCabe index: 5
number of parameters: 1

id: 323
unit: private boolean isFileCompressed()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 622
end line: 633
size: 12 LOC
McCabe index: 4
number of parameters: 1

id: 324
unit: public void addResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 264
end line: 275
size: 12 LOC
McCabe index: 4
number of parameters: 3

id: 325
unit: public void addResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 277
end line: 288
size: 12 LOC
McCabe index: 4
number of parameters: 3

id: 326
unit: public void addResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 290
end line: 301
size: 12 LOC
McCabe index: 4
number of parameters: 3

id: 327
unit: public void addResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 303
end line: 315
size: 12 LOC
McCabe index: 4
number of parameters: 3

id: 328
unit: protected Set parseProcessorOutputPorts()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1109
end line: 1120
size: 12 LOC
McCabe index: 2
number of parameters: 2

id: 329
unit: private void makeRange()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SpreadsheetActivityParser.java
start line: 112
end line: 124
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 330
unit: public void workflowDoc()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 846
end line: 859
size: 12 LOC
McCabe index: 1
number of parameters: 3

id: 331
unit: protected void parseCrossDotOrPortNodeList()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 87
end line: 98
size: 12 LOC
McCabe index: 5
number of parameters: 1

id: 332
unit: private OutputProcessorPort findOrCreateProcessorOutputPort()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 296
end line: 307
size: 12 LOC
McCabe index: 2
number of parameters: 4

id: 333
unit: public synchronized Set getScuflExtensionParsers()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 431
end line: 446
size: 12 LOC
McCabe index: 4
number of parameters: 0

id: 334
unit: private String getLiteral()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 117
end line: 129
size: 12 LOC
McCabe index: 2
number of parameters: 2

id: 335
unit: public Set parseProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 105
end line: 118
size: 12 LOC
McCabe index: 2
number of parameters: 1

id: 336
unit: public Step convertProcessor()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java
start line: 69
end line: 80
size: 12 LOC
McCabe index: 2
number of parameters: 2

id: 337
unit: def main()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 12 LOC
McCabe index: 6
number of parameters: 2

id: 338
unit: public int compareTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 86
end line: 97
size: 12 LOC
McCabe index: 3
number of parameters: 1

id: 339
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 150
end line: 161
size: 12 LOC
McCabe index: 4
number of parameters: 0

id: 340
unit: private String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 259
end line: 270
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 341
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 84
end line: 95
size: 12 LOC
McCabe index: 5
number of parameters: 1

id: 342
unit: private void appendPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 83
end line: 94
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 343
unit: private String datalink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 253
end line: 264
size: 12 LOC
McCabe index: 2
number of parameters: 1

id: 344
unit: protected synchronized WorkflowBundle parse()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 100
end line: 111
size: 12 LOC
McCabe index: 2
number of parameters: 1

id: 345
unit: private void addAcceptHeaders()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 401
end line: 413
size: 12 LOC
McCabe index: 4
number of parameters: 2

id: 346
unit: public NamedSet clone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 142
end line: 153
size: 12 LOC
McCabe index: 3
number of parameters: 0

id: 347
unit: public Configuration configurationFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 130
end line: 141
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 348
unit: public List controlLinksBlocking()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 174
end line: 185
size: 12 LOC
McCabe index: 4
number of parameters: 1

id: 349
unit: public ProcessorBinding processorBindingForProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 254
end line: 265
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 350
unit: public void createActivityPortsFromProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 678
end line: 689
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 351
unit: public void createProcessorPortsFromActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 691
end line: 702
size: 12 LOC
McCabe index: 3
number of parameters: 2

id: 352
unit: public Set getConstants()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 886
end line: 897
size: 12 LOC
McCabe index: 5
number of parameters: 2

id: 353
unit: public Revision newRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 66
end line: 77
size: 12 LOC
McCabe index: 2
number of parameters: 1

id: 354
unit: public boolean detectedProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 204
end line: 215
size: 12 LOC
McCabe index: 10
number of parameters: 0

id: 355
unit: private void fillInDesiredCardinalities()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 286
end line: 297
size: 12 LOC
McCabe index: 4
number of parameters: 2

id: 356
unit: public static Path setReference()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 338
end line: 374
size: 11 LOC
McCabe index: 1
number of parameters: 2

id: 357
unit: protected static Path withExtension()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 389
end line: 400
size: 11 LOC
McCabe index: 5
number of parameters: 2

id: 358
unit: public String getErrorList()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 93
end line: 104
size: 11 LOC
McCabe index: 3
number of parameters: 0

id: 359
unit: public String getInfoWarnings()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 108
end line: 118
size: 11 LOC
McCabe index: 3
number of parameters: 0

id: 360
unit: public String getWarnings()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 122
end line: 134
size: 11 LOC
McCabe index: 3
number of parameters: 0

id: 361
unit: public FileSystem newFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 604
end line: 614
size: 11 LOC
McCabe index: 2
number of parameters: 2

id: 362
unit: public void read()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/validate/Validate.java
start line: 65
end line: 78
size: 11 LOC
McCabe index: 3
number of parameters: 1

id: 363
unit: public ToRobundle()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToRobundle.java
start line: 36
end line: 49
size: 11 LOC
McCabe index: 2
number of parameters: 2

id: 364
unit: protected JsonNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 245
end line: 255
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 365
unit: protected JsonNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 257
end line: 267
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 366
unit: public void run()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 58
end line: 68
size: 11 LOC
McCabe index: 2
number of parameters: 0

id: 367
unit: void stream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/StreamHelper.java
start line: 73
end line: 85
size: 11 LOC
McCabe index: 3
number of parameters: 0

id: 368
unit: public HashMap getManifestEntries()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1138
end line: 1148
size: 11 LOC
McCabe index: 4
number of parameters: 0

id: 369
unit: public void endElement()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1634
end line: 1644
size: 11 LOC
McCabe index: 4
number of parameters: 3

id: 370
unit: protected void open()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 109
end line: 119
size: 11 LOC
McCabe index: 3
number of parameters: 1

id: 371
unit: public void addResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 252
end line: 262
size: 11 LOC
McCabe index: 3
number of parameters: 3

id: 372
unit: public synchronized Set getT2Parsers()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 311
end line: 325
size: 11 LOC
McCabe index: 4
number of parameters: 0

id: 373
unit: protected Configuration parseConfigurationAndAddToProfile()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 430
end line: 440
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 374
unit: public static String elementToXML()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 484
end line: 494
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 375
unit: protected Set parseOutputPorts()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1082
end line: 1092
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 376
unit: protected Set parseProcessorInputPorts()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1095
end line: 1106
size: 11 LOC
McCabe index: 2
number of parameters: 2

id: 377
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BeanshellActivityParser.java
start line: 60
end line: 70
size: 11 LOC
McCabe index: 5
number of parameters: 1

id: 378
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomartActivityParser.java
start line: 58
end line: 71
size: 11 LOC
McCabe index: 1
number of parameters: 3

id: 379
unit: private void inputActivityPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 165
end line: 176
size: 11 LOC
McCabe index: 1
number of parameters: 1

id: 380
unit: public void workflowBundleDoc()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 832
end line: 844
size: 11 LOC
McCabe index: 1
number of parameters: 2

id: 381
unit: protected JAXBContext getJaxbContext()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java
start line: 50
end line: 60
size: 11 LOC
McCabe index: 2
number of parameters: 0

id: 382
unit: protected void parseOutputActivityPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 223
end line: 234
size: 11 LOC
McCabe index: 3
number of parameters: 1

id: 383
unit: protected void readProfile()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 304
end line: 314
size: 11 LOC
McCabe index: 3
number of parameters: 2

id: 384
unit: private InputProcessorPort findOrCreateProcessorInputPort()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 309
end line: 319
size: 11 LOC
McCabe index: 2
number of parameters: 3

id: 385
unit: private void parseExtensionObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 330
end line: 341
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 386
unit: public boolean isValidDataType()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 488
end line: 498
size: 11 LOC
McCabe index: 11
number of parameters: 1

id: 387
unit: private static  Stream resolveItemAsStream()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 713
end line: 723
size: 11 LOC
McCabe index: 3
number of parameters: 3

id: 388
unit: protected int compareItems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/IterableComparator.java
start line: 94
end line: 105
size: 11 LOC
McCabe index: 6
number of parameters: 2

id: 389
unit: private int portCompare()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 123
end line: 138
size: 11 LOC
McCabe index: 3
number of parameters: 2

id: 390
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 79
end line: 89
size: 11 LOC
McCabe index: 3
number of parameters: 0

id: 391
unit: private  List sorted()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 282
end line: 292
size: 11 LOC
McCabe index: 1
number of parameters: 1

id: 392
unit: private void parseConfigures()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 412
end line: 422
size: 11 LOC
McCabe index: 2
number of parameters: 1

id: 393
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 139
end line: 150
size: 11 LOC
McCabe index: 4
number of parameters: 0

id: 394
unit: public JsonNode portDefinitionFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 239
end line: 252
size: 11 LOC
McCabe index: 2
number of parameters: 2

id: 395
unit: public Workflow nestedWorkflowForProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 590
end line: 600
size: 11 LOC
McCabe index: 3
number of parameters: 2

id: 396
unit: public  T findAncestral()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 102
end line: 112
size: 11 LOC
McCabe index: 4
number of parameters: 2

id: 397
unit: private Set getReferencedPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 337
end line: 347
size: 11 LOC
McCabe index: 4
number of parameters: 1

id: 398
unit: public void visitRoot()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 559
end line: 569
size: 11 LOC
McCabe index: 6
number of parameters: 1

id: 399
unit: public void visitTyped()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 577
end line: 587
size: 11 LOC
McCabe index: 6
number of parameters: 1

id: 400
unit: public DataLink getMainIncomingDataLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 122
end line: 132
size: 11 LOC
McCabe index: 5
number of parameters: 1

id: 401
unit: private void addPrevious()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/ROEvoSerializer.java
start line: 75
end line: 85
size: 10 LOC
McCabe index: 1
number of parameters: 3

id: 402
unit: protected static synchronized JAXBContext getJaxbContext()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFJaxb.java
start line: 80
end line: 89
size: 10 LOC
McCabe index: 2
number of parameters: 0

id: 403
unit: public Object getAboutObject()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 59
end line: 68
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 404
unit: private Path toDestination()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 190
end line: 207
size: 10 LOC
McCabe index: 3
number of parameters: 1

id: 405
unit: public OutputStream newOutputStream()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 655
end line: 665
size: 10 LOC
McCabe index: 2
number of parameters: 2

id: 406
unit: public PathMatcher getPathMatcher()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 119
end line: 128
size: 10 LOC
McCabe index: 1
number of parameters: 1

id: 407
unit: protected BundlePath wrap()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 206
end line: 216
size: 10 LOC
McCabe index: 3
number of parameters: 1

id: 408
unit: public TreeModel makeProcessorTree()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 116
end line: 126
size: 10 LOC
McCabe index: 1
number of parameters: 1

id: 409
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 210
end line: 221
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 410
unit: static File newTempOdfDirectory()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDir.java
start line: 41
end line: 50
size: 10 LOC
McCabe index: 3
number of parameters: 2

id: 411
unit: public void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 963
end line: 976
size: 10 LOC
McCabe index: 2
number of parameters: 3

id: 412
unit: public UCFPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 82
end line: 92
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 413
unit: public UCFPackage clone()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 609
end line: 618
size: 10 LOC
McCabe index: 2
number of parameters: 0

id: 414
unit: public List getAdditionalSchemas()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 100
end line: 109
size: 10 LOC
McCabe index: 2
number of parameters: 0

id: 415
unit: protected synchronized static JAXBContext getJAxbContextStatic()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 538
end line: 547
size: 10 LOC
McCabe index: 2
number of parameters: 0

id: 416
unit: public void annotation()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 549
end line: 611
size: 10 LOC
McCabe index: 5
number of parameters: 1

id: 417
unit: protected void parseInputWorkflowPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 189
end line: 198
size: 10 LOC
McCabe index: 2
number of parameters: 1

id: 418
unit: protected void processorInputProcessorPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 324
end line: 333
size: 10 LOC
McCabe index: 2
number of parameters: 1

id: 419
unit: private void replaceDefaultsWithStringConstants()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 369
end line: 379
size: 10 LOC
McCabe index: 4
number of parameters: 1

id: 420
unit: public JsonNode convertWorkflowProcessToJsonNode()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 96
end line: 106
size: 10 LOC
McCabe index: 1
number of parameters: 1

id: 421
unit: public void parseInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 121
end line: 130
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 422
unit: protected static String withExtensionFilename()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 342
end line: 352
size: 10 LOC
McCabe index: 5
number of parameters: 2

id: 423
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 222
end line: 231
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 424
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 66
end line: 75
size: 10 LOC
McCabe index: 6
number of parameters: 1

id: 425
unit: protected List discoverReaders()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 106
end line: 122
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 426
unit: protected List discoverWriters()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 124
end line: 139
size: 10 LOC
McCabe index: 3
number of parameters: 0

id: 427
unit: public void cloneNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 52
end line: 69
size: 10 LOC
McCabe index: 3
number of parameters: 1

id: 428
unit: public Scufl2Tools getTools()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 152
end line: 161
size: 10 LOC
McCabe index: 5
number of parameters: 0

id: 429
unit: public URITools getUriTools()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 163
end line: 172
size: 10 LOC
McCabe index: 5
number of parameters: 0

id: 430
unit: public boolean remove()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 246
end line: 255
size: 10 LOC
McCabe index: 3
number of parameters: 1

id: 431
unit: public List annotationsFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 106
end line: 115
size: 10 LOC
McCabe index: 4
number of parameters: 2

id: 432
unit: public Configuration createConfigurationFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 850
end line: 861
size: 10 LOC
McCabe index: 1
number of parameters: 2

id: 433
unit: public boolean detectedProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 219
end line: 228
size: 10 LOC
McCabe index: 10
number of parameters: 0

id: 434
unit: public static void main()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescAgent.java
start line: 51
end line: 63
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 435
unit: public static void closeAndSaveBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 92
end line: 100
size: 9 LOC
McCabe index: 2
number of parameters: 2

id: 436
unit: protected OntModel getOntModel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 159
end line: 168
size: 9 LOC
McCabe index: 1
number of parameters: 0

id: 437
unit: public FileVisitResult visitFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 217
end line: 225
size: 9 LOC
McCabe index: 2
number of parameters: 2

id: 438
unit: public static BundleFileSystemProvider getInstance()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 239
end line: 249
size: 9 LOC
McCabe index: 3
number of parameters: 0

id: 439
unit: private boolean asBoolean()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 313
end line: 321
size: 9 LOC
McCabe index: 3
number of parameters: 2

id: 440
unit: public  V getFileAttributeView()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 385
end line: 400
size: 9 LOC
McCabe index: 2
number of parameters: 3

id: 441
unit: public Path getPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 476
end line: 484
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 442
unit: protected BundleFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 44
end line: 53
size: 9 LOC
McCabe index: 3
number of parameters: 2

id: 443
unit: public List showProcessorNames()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 128
end line: 136
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 444
unit: public ToJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 95
end line: 106
size: 9 LOC
McCabe index: 1
number of parameters: 0

id: 445
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 258
end line: 267
size: 9 LOC
McCabe index: 1
number of parameters: 4

id: 446
unit: private OdfPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 266
end line: 274
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 447
unit: public void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 534
end line: 545
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 448
unit: private void cacheContent()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 640
end line: 650
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 449
unit: public void setPackageMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 145
end line: 153
size: 9 LOC
McCabe index: 4
number of parameters: 1

id: 450
unit: public String getResourceAsString()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 317
end line: 325
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 451
unit: public InputStream getResourceAsInputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 337
end line: 345
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 452
unit: protected List getAdditionalSchemas()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 535
end line: 543
size: 9 LOC
McCabe index: 3
number of parameters: 0

id: 453
unit: public List getAdditionalSchemas()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/RESTActivityParser.java
start line: 66
end line: 74
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 454
unit: public List getAdditionalSchemas()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/XPathActivityParser.java
start line: 64
end line: 72
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 455
unit: private GranularPortDepth makeGranularPortDepth()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 310
end line: 318
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 456
unit: public void profileDoc()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 766
end line: 776
size: 9 LOC
McCabe index: 1
number of parameters: 3

id: 457
unit: protected String findWorkflowBundlePath()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java
start line: 66
end line: 74
size: 9 LOC
McCabe index: 4
number of parameters: 0

id: 458
unit: private void createMarshaller()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 68
end line: 76
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 459
unit: protected void parseInputActivityPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 197
end line: 206
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 460
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomartExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 461
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/ApiConsumerExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 462
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/StringConstantExtensionParser.java
start line: 59
end line: 67
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 463
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomobyExtensionParser.java
start line: 48
end line: 56
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 464
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BeanshellExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 465
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/RshellExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 466
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/SoaplabExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 467
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/LocalExtensionParser.java
start line: 45
end line: 53
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 468
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 102
end line: 114
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 469
unit: protected List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 421
end line: 429
size: 9 LOC
McCabe index: 3
number of parameters: 0

id: 470
unit: private static String sanitiseName()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 488
end line: 496
size: 9 LOC
McCabe index: 5
number of parameters: 1

id: 471
unit: public void parseInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java
start line: 61
end line: 70
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 472
unit: public void parseOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java
start line: 72
end line: 80
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 473
unit: public WorkflowBundle buildWorkflowBundle()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 175
end line: 184
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 474
unit: public WorkflowProcess convertWorkflow()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java
start line: 23
end line: 33
size: 9 LOC
McCabe index: 1
number of parameters: 1

id: 475
unit: public static NavigableMap getPorts()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 260
end line: 268
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 476
unit: protected JsonNode parseJson()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 260
end line: 268
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 477
unit: protected Integer compareNulls()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/IterableComparator.java
start line: 107
end line: 115
size: 9 LOC
McCabe index: 7
number of parameters: 2

id: 478
unit: public static Integer nullCompare()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/NullSafeComparator.java
start line: 64
end line: 72
size: 9 LOC
McCabe index: 7
number of parameters: 2

id: 479
unit: public void writeBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 305
end line: 313
size: 9 LOC
McCabe index: 1
number of parameters: 3

id: 480
unit: private void parseWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 334
end line: 342
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 481
unit: private void parseProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 372
end line: 380
size: 9 LOC
McCabe index: 2
number of parameters: 1

id: 482
unit: public void writeBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 462
end line: 470
size: 9 LOC
McCabe index: 2
number of parameters: 3

id: 483
unit: public void writeBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 496
end line: 504
size: 9 LOC
McCabe index: 2
number of parameters: 3

id: 484
unit: public List datalinksFrom()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 203
end line: 211
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 485
unit: public List datalinksTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 214
end line: 222
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 486
unit: public List processorBindingsForProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 267
end line: 275
size: 9 LOC
McCabe index: 3
number of parameters: 2

id: 487
unit: public List processorBindingsToActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 277
end line: 285
size: 9 LOC
McCabe index: 3
number of parameters: 1

id: 488
unit: public Set possibleDownStreamProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 374
end line: 382
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 489
unit: public Set possibleUpStreamProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 400
end line: 408
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 490
unit: public ProcessorBinding bindActivityToProcessorByMatchingPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 704
end line: 712
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 491
unit: public Activity createActivityFromProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 746
end line: 754
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 492
unit: public Configuration createConfigurationFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 863
end line: 871
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 493
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 226
end line: 234
size: 9 LOC
McCabe index: 1
number of parameters: 2

id: 494
unit: private void rememberDataLinkConnections()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 381
end line: 389
size: 9 LOC
McCabe index: 2
number of parameters: 0

id: 495
unit: private void addRevision()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/ROEvoSerializer.java
start line: 66
end line: 73
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 496
unit: public void writeBundle()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescWriter.java
start line: 67
end line: 76
size: 8 LOC
McCabe index: 2
number of parameters: 3

id: 497
unit: public void setAbout()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 102
end line: 111
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 498
unit: private Individual findRO()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 113
end line: 123
size: 8 LOC
McCabe index: 2
number of parameters: 2

id: 499
unit: public Manifest getManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 83
end line: 90
size: 8 LOC
McCabe index: 3
number of parameters: 0

id: 500
unit: protected static void createBundleAsZip()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 228
end line: 237
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 501
unit: public void createDirectory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 363
end line: 371
size: 8 LOC
McCabe index: 2
number of parameters: 2

id: 502
unit: public FileChannel newFileChannel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 594
end line: 601
size: 8 LOC
McCabe index: 1
number of parameters: 3

id: 503
unit: public String toString()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 200
end line: 207
size: 8 LOC
McCabe index: 3
number of parameters: 0

id: 504
unit: public void convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 133
end line: 143
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 505
unit: public void removeResource()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 384
end line: 391
size: 8 LOC
McCabe index: 4
number of parameters: 1

id: 506
unit: public boolean equals()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 427
end line: 435
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 507
unit: protected Unmarshaller initialValue()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 225
end line: 232
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 508
unit: protected void makeProfile()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 335
end line: 343
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 509
unit: private URI makeRavenURI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 345
end line: 353
size: 8 LOC
McCabe index: 2
number of parameters: 2

id: 510
unit: private  T getPortElement()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 154
end line: 161
size: 8 LOC
McCabe index: 3
number of parameters: 3

id: 511
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLXMLSplitterParser.java
start line: 61
end line: 68
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 512
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLActivityParser.java
start line: 48
end line: 55
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 513
unit: private Map makeMappedMechanismTypes()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 80
end line: 87
size: 8 LOC
McCabe index: 1
number of parameters: 0

id: 514
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 90
end line: 97
size: 8 LOC
McCabe index: 4
number of parameters: 1

id: 515
unit: private GranularPortDepth granularPortDepth()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 156
end line: 163
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 516
unit: private PortDepth portDepth()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 193
end line: 200
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 517
unit: private PortDepth makePortDepth()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 320
end line: 327
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 518
unit: protected WorkflowBean resolveBeanUri()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 112
end line: 119
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 519
unit: private Revision addOrExisting()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java
start line: 158
end line: 165
size: 8 LOC
McCabe index: 2
number of parameters: 2

id: 520
unit: protected void parseOutputWorkflowPort()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 219
end line: 226
size: 8 LOC
McCabe index: 1
number of parameters: 1

id: 521
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/WsdlExtensionParser.java
start line: 45
end line: 52
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 522
unit: protected Unmarshaller initialValue()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 132
end line: 139
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 523
unit: private void findExtensionParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 343
end line: 350
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 524
unit: public WorkflowProcess()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 64
end line: 72
size: 8 LOC
McCabe index: 1
number of parameters: 1

id: 525
unit: public void parseInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 87
end line: 94
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 526
unit: public void parseOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 96
end line: 103
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 527
unit: private ObjectNode convertInputWorkflows()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 108
end line: 116
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 528
unit: private ObjectNode convertOutputWorkflows()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 118
end line: 126
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 529
unit: public PortDetail convertToPortDetail()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 157
end line: 165
size: 8 LOC
McCabe index: 1
number of parameters: 1

id: 530
unit: public void createProcessPortsFromWorkflow()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 235
end line: 242
size: 8 LOC
McCabe index: 3
number of parameters: 2

id: 531
unit: public void parseOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 132
end line: 139
size: 8 LOC
McCabe index: 2
number of parameters: 0

id: 532
unit: public Set convertInputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java
start line: 35
end line: 42
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 533
unit: public Set convertOutputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/TavernaConverter.java
start line: 44
end line: 51
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 534
unit: public void extractLabel()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 394
end line: 401
size: 8 LOC
McCabe index: 3
number of parameters: 2

id: 535
unit: public void extractDescription()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 410
end line: 417
size: 8 LOC
McCabe index: 3
number of parameters: 2

id: 536
unit: public static void deleteAllExtensions()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 164
end line: 171
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 537
unit: public static Path getIntermediate()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 426
end line: 434
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 538
unit: public ValueType get()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/LazyMap.java
start line: 69
end line: 76
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 539
unit: public synchronized void writeBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 295
end line: 302
size: 8 LOC
McCabe index: 1
number of parameters: 3

id: 540
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 201
end line: 208
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 541
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 240
end line: 247
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 542
unit: public List configurationsFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 163
end line: 171
size: 8 LOC
McCabe index: 3
number of parameters: 2

id: 543
unit: private  Iterable iterable()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 820
end line: 827
size: 8 LOC
McCabe index: 1
number of parameters: 1

id: 544
unit: public void createDefaultIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 899
end line: 909
size: 8 LOC
McCabe index: 2
number of parameters: 1

id: 545
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 116
end line: 123
size: 8 LOC
McCabe index: 1
number of parameters: 2

id: 546
unit: public void visitPorted()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 410
end line: 417
size: 8 LOC
McCabe index: 4
number of parameters: 1

id: 547
unit: public void dataLinkReceiver()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 68
end line: 75
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 548
unit: public void dataLinkSender()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 78
end line: 85
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 549
unit: public void rememberDataLinkSender()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 90
end line: 97
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 550
unit: public void rememberDataLinkReceiver()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 99
end line: 106
size: 8 LOC
McCabe index: 3
number of parameters: 1

id: 551
unit: private void validateWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 88
end line: 95
size: 8 LOC
McCabe index: 1
number of parameters: 0

id: 552
unit: protected static String filenameWithoutExtension()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 129
end line: 136
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 553
unit: public static String getMimeType()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 148
end line: 154
size: 7 LOC
McCabe index: 3
number of parameters: 1

id: 554
unit: public static String getStringValue()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 180
end line: 186
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 555
unit: public static Bundle openBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 200
end line: 206
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 556
unit: public static Path uriToBundlePath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 381
end line: 387
size: 7 LOC
McCabe index: 3
number of parameters: 2

id: 557
unit: protected static synchronized Marshaller createMarshaller()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 124
end line: 130
size: 7 LOC
McCabe index: 1
number of parameters: 0

id: 558
unit: public Path getFolder()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 109
end line: 115
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 559
unit: public Proxy getOrCreateBundledAs()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 122
end line: 128
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 560
unit: public URI getProxy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 132
end line: 138
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 561
unit: public void setBundledAs()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 155
end line: 161
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 562
unit: public URI getAbout()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 45
end line: 51
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 563
unit: public String getFolderName()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 60
end line: 66
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 564
unit: public static Path temporaryBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/TemporaryFiles.java
start line: 29
end line: 41
size: 7 LOC
McCabe index: 1
number of parameters: 0

id: 565
unit: public BundleFileChannel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 82
end line: 88
size: 7 LOC
McCabe index: 1
number of parameters: 4

id: 566
unit: public static BundleFileSystem newFileSystemFromTemporary()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 293
end line: 299
size: 7 LOC
McCabe index: 1
number of parameters: 0

id: 567
unit: protected BundlePath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 42
end line: 48
size: 7 LOC
McCabe index: 3
number of parameters: 2

id: 568
unit: public boolean equals()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 66
end line: 72
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 569
unit: public void close()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 56
end line: 64
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 570
unit: protected FileSystem getOrigFS()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 104
end line: 110
size: 7 LOC
McCabe index: 3
number of parameters: 0

id: 571
unit: public Scufl2Convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 55
end line: 61
size: 7 LOC
McCabe index: 1
number of parameters: 3

id: 572
unit: public Scufl2Convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/Scufl2Convert.java
start line: 64
end line: 71
size: 7 LOC
McCabe index: 1
number of parameters: 3

id: 573
unit: protected ObjectNode annotations()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 123
end line: 131
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 574
unit: public EncryptionData()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 38
end line: 44
size: 7 LOC
McCabe index: 1
number of parameters: 4

id: 575
unit: static TempDirDeleter getInstance()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 37
end line: 43
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 576
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 214
end line: 221
size: 7 LOC
McCabe index: 1
number of parameters: 4

id: 577
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 236
end line: 243
size: 7 LOC
McCabe index: 1
number of parameters: 3

id: 578
unit: public static OdfPackage create()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 207
end line: 214
size: 7 LOC
McCabe index: 1
number of parameters: 0

id: 579
unit: private File newTempSourceFile()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 419
end line: 427
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 580
unit: private void addDirectory()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 798
end line: 805
size: 7 LOC
McCabe index: 3
number of parameters: 1

id: 581
unit: private void insert()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1130
end line: 1136
size: 7 LOC
McCabe index: 3
number of parameters: 2

id: 582
unit: private File getTempDir()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1515
end line: 1521
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 583
unit: public int hashCode()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 438
end line: 444
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 584
unit: public static  T findNamed()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 167
end line: 173
size: 7 LOC
McCabe index: 3
number of parameters: 2

id: 585
unit: protected Workflow skeletonDataflow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1203
end line: 1209
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 586
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLXMLSplitterParser.java
start line: 52
end line: 58
size: 7 LOC
McCabe index: 3
number of parameters: 1

id: 587
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomobyActivityParser.java
start line: 45
end line: 51
size: 7 LOC
McCabe index: 3
number of parameters: 1

id: 588
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomobyActivityParser.java
start line: 54
end line: 60
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 589
unit: protected String bundleUUID()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 110
end line: 116
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 590
unit: private void activity()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 117
end line: 123
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 591
unit: private void profile()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 249
end line: 255
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 592
unit: protected ProfileDocument makeProfile()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 679
end line: 686
size: 7 LOC
McCabe index: 1
number of parameters: 2

id: 593
unit: private Type type()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 824
end line: 830
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 594
unit: protected void addRevisions()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 144
end line: 156
size: 7 LOC
McCabe index: 2
number of parameters: 3

id: 595
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLReader.java
start line: 42
end line: 48
size: 7 LOC
McCabe index: 1
number of parameters: 2

id: 596
unit: public boolean equals()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 86
end line: 93
size: 7 LOC
McCabe index: 5
number of parameters: 1

id: 597
unit: public Set convertInputProcessPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 262
end line: 270
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 598
unit: public Set convertOutputProcessPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 272
end line: 280
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 599
unit: private void getParamDetails()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 375
end line: 384
size: 7 LOC
McCabe index: 1
number of parameters: 4

id: 600
unit: protected static String filenameWithoutExtension()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 173
end line: 179
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 601
unit: public static JsonNode getWorkflowRunReportAsJson()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 362
end line: 368
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 602
unit: public static void setWorkflowRunReport()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 370
end line: 376
size: 7 LOC
McCabe index: 1
number of parameters: 2

id: 603
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 197
end line: 203
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 604
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 254
end line: 260
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 605
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 175
end line: 181
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 606
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 195
end line: 202
size: 7 LOC
McCabe index: 3
number of parameters: 0

id: 607
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 282
end line: 288
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 608
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 224
end line: 230
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 609
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 181
end line: 187
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 610
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 40
end line: 46
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 611
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 40
end line: 46
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 612
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 52
end line: 58
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 613
unit: private void parseProcessorBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 396
end line: 402
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 614
unit: private void parseConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 404
end line: 410
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 615
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 431
end line: 437
size: 7 LOC
McCabe index: 1
number of parameters: 2

id: 616
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 115
end line: 121
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 617
unit: public final boolean visitLeave()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 189
end line: 195
size: 7 LOC
McCabe index: 2
number of parameters: 1

id: 618
unit: public ProcessorSplit()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 552
end line: 558
size: 7 LOC
McCabe index: 1
number of parameters: 4

id: 619
unit: public boolean containsNestedWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 670
end line: 676
size: 7 LOC
McCabe index: 3
number of parameters: 2

id: 620
unit: public ProcessorBinding createProcessorAndBindingFromActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 738
end line: 744
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 621
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 134
end line: 140
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 622
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 171
end line: 177
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 623
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 128
end line: 134
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 624
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 211
end line: 217
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 625
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputActivityPort.java
start line: 70
end line: 76
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 626
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputActivityPort.java
start line: 70
end line: 76
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 627
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 80
end line: 86
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 628
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputProcessorPort.java
start line: 71
end line: 77
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 629
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputWorkflowPort.java
start line: 73
end line: 79
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 630
unit: public void setParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputProcessorPort.java
start line: 73
end line: 79
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 631
unit: public void visitAbstractDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 115
end line: 121
size: 7 LOC
McCabe index: 5
number of parameters: 1

id: 632
unit: public void visitNamed()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 350
end line: 357
size: 7 LOC
McCabe index: 4
number of parameters: 1

id: 633
unit: public void checkStructure()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 65
end line: 71
size: 7 LOC
McCabe index: 2
number of parameters: 2

id: 634
unit: private Map getDesiredCardinalities()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 278
end line: 284
size: 7 LOC
McCabe index: 1
number of parameters: 1

id: 635
unit: private static JAXBContext initContext()
file: taverna-baclava-language/src/main/java/org/apache/taverna/baclava/BaclavaReader.java
start line: 35
end line: 41
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 636
unit: private static JAXBContext initContext()
file: taverna-baclava-language/src/main/java/org/apache/taverna/baclava/BaclavaWriter.java
start line: 40
end line: 46
size: 7 LOC
McCabe index: 2
number of parameters: 0

id: 637
unit: public JsonNode sparql()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescAgent.java
start line: 85
end line: 91
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 638
unit: public static void copyRecursively()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 108
end line: 113
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 639
unit: public static Bundle openBundleReadOnly()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 226
end line: 234
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 640
unit: public String getPreferredPrefix()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 97
end line: 102
size: 6 LOC
McCabe index: 2
number of parameters: 3

id: 641
unit: protected static synchronized JAXBContext getJaxbContext()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 162
end line: 167
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 642
unit: public void setAuthoredBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 144
end line: 149
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 643
unit: public void setFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 187
end line: 192
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 644
unit: public void setAbout()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 117
end line: 122
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 645
unit: private URI uriWithSlash()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 209
end line: 214
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 646
unit: public FileVisitResult visitFileFailed()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveCopyFileVisitor.java
start line: 228
end line: 234
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 647
unit: public static void deleteRecursively()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveDeleteVisitor.java
start line: 35
end line: 40
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 648
unit: public FileVisitResult postVisitDirectory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveDeleteVisitor.java
start line: 43
end line: 48
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 649
unit: public void copy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 355
end line: 360
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 650
unit: public void move()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 514
end line: 519
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 651
unit: public  A readAttributes()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 672
end line: 677
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 652
unit: public Map readAttributes()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 680
end line: 685
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 653
unit: public void setAttribute()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 688
end line: 693
size: 6 LOC
McCabe index: 1
number of parameters: 4

id: 654
unit: protected BundleFileStore()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 33
end line: 39
size: 6 LOC
McCabe index: 3
number of parameters: 2

id: 655
unit: public boolean isOpen()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 154
end line: 159
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 656
unit: public Set supportedFileAttributeViews()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 177
end line: 182
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 657
unit: protected Path unwrap()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 184
end line: 191
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 658
unit: public String treeModelAsString()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 144
end line: 149
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 659
unit: public void isVerbose()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/stats/GetWfStat.java
start line: 185
end line: 190
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 660
unit: public void convert()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToRobundle.java
start line: 56
end line: 63
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 661
unit: private JsonNode toJson()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 290
end line: 297
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 662
unit: public OutputStream getOutputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 61
end line: 66
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 663
unit: public void setMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 464
end line: 469
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 664
unit: private static String getBaseURIFromFile()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1810
end line: 1815
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 665
unit: public void close()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1878
end line: 1883
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 666
unit: protected void open()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 98
end line: 103
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 667
unit: protected ResourceEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 399
end line: 404
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 668
unit: public ResourceEntry getResourceEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 546
end line: 551
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 669
unit: protected T2Parser getT2Parser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 304
end line: 309
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 670
unit: public static Transformer getTransformer()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 496
end line: 501
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 671
unit: public WorkflowBundle parseT2Flow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1150
end line: 1155
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 672
unit: public WorkflowBundle parseT2Flow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1158
end line: 1163
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 673
unit: protected void preserveOriginal()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 96
end line: 108
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 674
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/RESTActivityParser.java
start line: 58
end line: 63
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 675
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/XPathActivityParser.java
start line: 56
end line: 61
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 676
unit: private String elementByTag()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 293
end line: 298
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 677
unit: protected void mapBean()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 82
end line: 87
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 678
unit: private Set parse()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RevisionParser.java
start line: 167
end line: 172
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 679
unit: protected void parseProductOf()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 274
end line: 279
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 680
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLReader.java
start line: 48
end line: 53
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 681
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLReader.java
start line: 56
end line: 61
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 682
unit: private Element getChildElement()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 69
end line: 74
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 683
unit: public WorkflowBundle parseScufl()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 143
end line: 148
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 684
unit: public WorkflowBundle parseScufl()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 151
end line: 156
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 685
unit: private void parseWorkflowInput()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 225
end line: 231
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 686
unit: private void parseWorkflowOutput()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 238
end line: 244
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 687
unit: private void makeProfile()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 414
end line: 419
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 688
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLReader.java
start line: 57
end line: 62
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 689
unit: public void parse()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 80
end line: 85
size: 6 LOC
McCabe index: 1
number of parameters: 0

id: 690
unit: public CommandLineTool()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java
start line: 48
end line: 53
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 691
unit: public InputWorkflowPort convertInputWorkflowPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 59
end line: 65
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 692
unit: public PortDetail convertToPortDetail()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 167
end line: 173
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 693
unit: public Processor convertCommandLineTool()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 244
end line: 251
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 694
unit: public Processor convertReference()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 253
end line: 260
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 695
unit: public WorkflowParser()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 71
end line: 76
size: 6 LOC
McCabe index: 1
number of parameters: 0

id: 696
unit: def __init__()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 697
unit: def _is_valid_prefix()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 6 LOC
McCabe index: 3
number of parameters: 2

id: 698
unit: private static void checkExistingAnyExtension()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 152
end line: 157
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 699
unit: public static Path getListItem()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 242
end line: 247
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 700
unit: public static Path setReference()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 324
end line: 329
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 701
unit: public ObjectNode getJsonAsObjectNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 166
end line: 171
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 702
unit: public static int compareObjects()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/NullSafeComparator.java
start line: 94
end line: 99
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 703
unit: public DataLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 85
end line: 90
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 704
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 294
end line: 299
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 705
unit: public void setIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 264
end line: 269
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 706
unit: public String guessMediaTypeForSignature()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 446
end line: 451
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 707
unit: public WorkflowBundleReader getReaderForMediaType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 155
end line: 160
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 708
unit: public Set getSupportedReaderMediaTypes()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 182
end line: 187
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 709
unit: public Set getSupportedWriterMediaTypes()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 198
end line: 203
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 710
unit: public WorkflowBundleWriter getWriterForMediaType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 219
end line: 224
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 711
unit: public static  T cloneWorkflowBean()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 77
end line: 82
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 712
unit: public final boolean visitEnter()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 158
end line: 163
size: 6 LOC
McCabe index: 1
number of parameters: 1

id: 713
unit: public Collection getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 196
end line: 201
size: 6 LOC
McCabe index: 2
number of parameters: 0

id: 714
unit: public boolean contains()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 172
end line: 177
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 715
unit: public Configuration configurationForActivityBoundToProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 143
end line: 148
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 716
unit: public boolean containsNestedWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 659
end line: 664
size: 6 LOC
McCabe index: 3
number of parameters: 1

id: 717
unit: public void setConstantStringValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 873
end line: 878
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 718
unit: public AbstractRevisioned()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 41
end line: 46
size: 6 LOC
McCabe index: 1
number of parameters: 0

id: 719
unit: public ProcessorOutputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 70
end line: 75
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 720
unit: public ProcessorInputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 69
end line: 74
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 721
unit: public void checkCorrectness()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessValidator.java
start line: 36
end line: 41
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 722
unit: public NegativeValueProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NegativeValueProblem.java
start line: 35
end line: 40
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 723
unit: public OutOfScopeValueProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/OutOfScopeValueProblem.java
start line: 35
end line: 40
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 724
unit: public NonAbsoluteURIProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NonAbsoluteURIProblem.java
start line: 37
end line: 42
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 725
unit: public IncompatibleGranularDepthProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/IncompatibleGranularDepthProblem.java
start line: 35
end line: 40
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 726
unit: public void incompatibleGranularDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 129
end line: 134
size: 6 LOC
McCabe index: 1
number of parameters: 3

id: 727
unit: public List getOutgoingDataLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 108
end line: 113
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 728
unit: public List getIncomingDataLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 115
end line: 120
size: 6 LOC
McCabe index: 2
number of parameters: 1

id: 729
unit: private void checkCompleteness()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 101
end line: 107
size: 6 LOC
McCabe index: 3
number of parameters: 0

id: 730
unit: private Integer getPortNodeIterationDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 320
end line: 325
size: 6 LOC
McCabe index: 2
number of parameters: 2

id: 731
unit: public static void writeBaclava()
file: taverna-baclava-language/src/main/java/org/apache/taverna/baclava/BaclavaWriter.java
start line: 48
end line: 54
size: 6 LOC
McCabe index: 1
number of parameters: 2

id: 732
unit: public static Path closeBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 102
end line: 106
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 733
unit: public static Path getAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 138
end line: 142
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 734
unit: protected static synchronized Marshaller createMarshaller()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFJaxb.java
start line: 70
end line: 74
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 735
unit: protected static synchronized Unmarshaller createUnMarshaller()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 132
end line: 136
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 736
unit: public Optional getAnnotation()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 155
end line: 159
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 737
unit: public List getContext()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 208
end line: 215
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 738
unit: public void setAuthoredBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 405
end line: 409
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 739
unit: public void setHistory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 447
end line: 451
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 740
unit: public void setUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 213
end line: 220
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 741
unit: public FileVisitResult visitFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/RecursiveDeleteVisitor.java
start line: 51
end line: 55
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 742
unit: public static BundleFileSystem newFileSystemFromNew()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 281
end line: 285
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 743
unit: public static BundleFileSystem newFileSystemFromNew()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 287
end line: 291
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 744
unit: public InputStream newInputStream()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 647
end line: 652
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 745
unit: public ProcessorNames()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 59
end line: 63
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 746
unit: public String showProcessorTree()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 138
end line: 142
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 747
unit: public ServiceTypes()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ServiceTypes.java
start line: 49
end line: 54
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 748
unit: public void writeBundle()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 69
end line: 73
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 749
unit: public void writeBundle()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 76
end line: 80
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 750
unit: public void parse()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 69
end line: 73
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 751
unit: public KeyDerivation()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 37
end line: 41
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 752
unit: public OdfFileEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 40
end line: 44
size: 5 LOC
McCabe index: 2
number of parameters: 2

id: 753
unit: public OdfFileEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 46
end line: 50
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 754
unit: public OdfPackageStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 50
end line: 54
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 755
unit: void close()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 80
end line: 84
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 756
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 138
end line: 142
size: 5 LOC
McCabe index: 1
number of parameters: 4

id: 757
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 157
end line: 161
size: 5 LOC
McCabe index: 1
number of parameters: 4

id: 758
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 176
end line: 180
size: 5 LOC
McCabe index: 1
number of parameters: 4

id: 759
unit: public void transform()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfXMLHelper.java
start line: 195
end line: 199
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 760
unit: public static boolean isExternalReference()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1504
end line: 1509
size: 5 LOC
McCabe index: 3
number of parameters: 1

id: 761
unit: public EntityResolver getEntityResolver()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1792
end line: 1796
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 762
unit: public URIResolver getURIResolver()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1804
end line: 1808
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 763
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/DataflowActivityParser.java
start line: 50
end line: 54
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 764
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ComponentActivityParser.java
start line: 46
end line: 50
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 765
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/InteractionActivityParser.java
start line: 48
end line: 52
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 766
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SpreadsheetActivityParser.java
start line: 53
end line: 57
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 767
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SoaplabActivityParser.java
start line: 47
end line: 51
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 768
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/RshellActivityParser.java
start line: 70
end line: 74
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 769
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/StringConstantActivityParser.java
start line: 49
end line: 53
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 770
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ApiConsomerActivityParser.java
start line: 46
end line: 50
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 771
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomartActivityParser.java
start line: 46
end line: 50
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 772
unit: public T2FlowParser getParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 158
end line: 162
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 773
unit: private boolean hasContent()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/RESTActivityParser.java
start line: 159
end line: 164
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 774
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ErrorBounceParser.java
start line: 44
end line: 48
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 775
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ErrorBounceParser.java
start line: 56
end line: 60
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 776
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/InvokeParser.java
start line: 44
end line: 48
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 777
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/InvokeParser.java
start line: 56
end line: 60
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 778
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ParallelizeParser.java
start line: 55
end line: 59
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 779
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/RetryParser.java
start line: 52
end line: 56
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 780
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/FailoverParser.java
start line: 44
end line: 48
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 781
unit: public ConditionalActivityParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java
start line: 51
end line: 55
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 782
unit: public boolean canHandlePlugin()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java
start line: 77
end line: 81
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 783
unit: private Resource makeResource()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 329
end line: 333
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 784
unit: public boolean visitLeave()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 530
end line: 535
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 785
unit: public JAXBContext getJaxbContext()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 635
end line: 639
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 786
unit: private Resource resource()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 778
end line: 782
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 787
unit: public WorkflowBundleParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowBundleParser.java
start line: 60
end line: 64
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 788
unit: public void writeBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 78
end line: 82
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 789
unit: public void writeBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 159
end line: 163
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 790
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomobyExtensionParser.java
start line: 41
end line: 45
size: 5 LOC
McCabe index: 3
number of parameters: 1

id: 791
unit: public ScuflParser getParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 95
end line: 99
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 792
unit: public WorkflowProcess()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 74
end line: 78
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 793
unit: public void parse()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java
start line: 55
end line: 59
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 794
unit: public Step()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 35
end line: 39
size: 5 LOC
McCabe index: 1
number of parameters: 0

id: 795
unit: public OutputWorkflowPort convertOutputWorkflowPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 67
end line: 72
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 796
unit: public void processNameSpace()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 88
end line: 94
size: 5 LOC
McCabe index: 3
number of parameters: 1

id: 797
unit: public void setCausedBy()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 45
end line: 49
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 798
unit: public void setMessage()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 51
end line: 55
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 799
unit: public void setTrace()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 57
end line: 61
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 800
unit: public static Path getInputs()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 210
end line: 214
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 801
unit: public static Path getOutputs()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 249
end line: 253
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 802
unit: public static Path setError()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 301
end line: 305
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 803
unit: public static void setStringValue()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 331
end line: 335
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 804
unit: public static Path getWorkflowDescription()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 382
end line: 386
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 805
unit: public static WorkflowBundle getWorkflowBundle()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 413
end line: 418
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 806
unit: public static Path getIntermediates()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 420
end line: 424
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 807
unit: public static WorkflowBundleIO getWfBundleIO()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 725
end line: 729
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 808
unit: public static void setWfBundleIO()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 731
end line: 735
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 809
unit: public void setJson()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 218
end line: 222
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 810
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 238
end line: 242
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 811
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 287
end line: 291
size: 5 LOC
McCabe index: 3
number of parameters: 0

id: 812
unit: public BlockingControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 73
end line: 77
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 813
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 205
end line: 209
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 814
unit: public void setInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 200
end line: 204
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 815
unit: public void setOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 217
end line: 221
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 816
unit: public void setProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 241
end line: 245
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 817
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 278
end line: 282
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 818
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 195
end line: 199
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 819
unit: public PortNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 46
end line: 50
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 820
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 151
end line: 155
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 821
unit: private void append()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 67
end line: 71
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 822
unit: private void append()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 77
end line: 81
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 823
unit: private void newLine()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 276
end line: 280
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 824
unit: private void parseWorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 328
end line: 332
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 825
unit: public List getReaders()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 167
end line: 171
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 826
unit: public List getWriters()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 231
end line: 235
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 827
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 211
end line: 215
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 828
unit: public WorkflowBean getTarget()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 81
end line: 85
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 829
unit: public void setTarget()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 103
end line: 107
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 830
unit: public void setMainProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 158
end line: 162
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 831
unit: public void setMainWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 164
end line: 168
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 832
unit: public URITools getUriTools()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 259
end line: 263
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 833
unit: public  T cloneOrOriginal()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 105
end line: 109
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 834
unit: public URI relativeUriForBean()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/URITools.java
start line: 89
end line: 93
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 835
unit: public SortedSet headSet()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 219
end line: 224
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 836
unit: public SortedSet subSet()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 278
end line: 282
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 837
unit: public SortedSet tailSet()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 285
end line: 289
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 838
unit: public ProcessorInputPortBinding processorPortBindingForPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 287
end line: 291
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 839
unit: public ProcessorOutputPortBinding processorPortBindingForPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 293
end line: 297
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 840
unit: public String getConstantStringValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 880
end line: 884
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 841
unit: public void setCurrentRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 54
end line: 58
size: 5 LOC
McCabe index: 2
number of parameters: 1

id: 842
unit: public URI getIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 94
end line: 98
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 843
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 215
end line: 219
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 844
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractGranularDepthPort.java
start line: 85
end line: 89
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 845
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 86
end line: 90
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 846
unit: public CorrectnessValidationListener validate()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessValidator.java
start line: 44
end line: 48
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 847
unit: public MismatchConfigurableTypeProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/MismatchConfigurableTypeProblem.java
start line: 35
end line: 39
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 848
unit: public PortMissingFromIterationStrategyStackProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMissingFromIterationStrategyStackProblem.java
start line: 37
end line: 41
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 849
unit: public PortMentionedTwiceProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMentionedTwiceProblem.java
start line: 34
end line: 38
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 850
unit: public void mismatchConfigurableType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 77
end line: 81
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 851
unit: public void negativeValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 84
end line: 88
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 852
unit: public void nonAbsoluteURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 91
end line: 95
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 853
unit: public void outOfScopeValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 103
end line: 107
size: 5 LOC
McCabe index: 1
number of parameters: 3

id: 854
unit: public void portMentionedTwice()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 110
end line: 114
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 855
unit: public void portMissingFromIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 117
end line: 121
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 856
unit: public ValidationException getException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 218
end line: 223
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 857
unit: public ValidationException getException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 231
end line: 235
size: 5 LOC
McCabe index: 2
number of parameters: 0

id: 858
unit: public void checkStructure()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 77
end line: 81
size: 5 LOC
McCabe index: 1
number of parameters: 2

id: 859
unit: public StructuralValidationListener validate()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 407
end line: 411
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 860
unit: public static DataThingMapType readBaclava()
file: taverna-baclava-language/src/main/java/org/apache/taverna/baclava/BaclavaReader.java
start line: 43
end line: 47
size: 5 LOC
McCabe index: 1
number of parameters: 1

id: 861
unit: public Set getMediaTypes()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescWriter.java
start line: 44
end line: 47
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 862
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescReader.java
start line: 50
end line: 53
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 863
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescReader.java
start line: 56
end line: 60
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 864
unit: public static Bundle createBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 115
end line: 118
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 865
unit: public static Bundle createBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 120
end line: 123
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 866
unit: public static Bundle openBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 208
end line: 211
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 867
unit: public static void safeCopy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 236
end line: 239
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 868
unit: public static void safeMove()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 241
end line: 244
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 869
unit: public static void setStringValue()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 376
end line: 379
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 870
unit: public RoValidator()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/RoValidator.java
start line: 78
end line: 81
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 871
unit: public ODFManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java
start line: 154
end line: 157
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 872
unit: public CombineManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 304
end line: 307
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 873
unit: public void readCombineArchive()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 491
end line: 495
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 874
unit: public PathMetadata getAggregation()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 128
end line: 131
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 875
unit: public URI relativeToBundleRoot()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 375
end line: 378
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 876
unit: private URI relativizePath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 90
end line: 93
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 877
unit: public Bundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 45
end line: 48
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 878
unit: public Path getSource()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 100
end line: 103
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 879
unit: public FileLock lock()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 102
end line: 105
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 880
unit: public MappedByteBuffer map()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 108
end line: 111
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 881
unit: public long read()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 134
end line: 137
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 882
unit: public long transferFrom()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 145
end line: 148
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 883
unit: public long transferTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 151
end line: 154
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 884
unit: public FileLock tryLock()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 162
end line: 165
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 885
unit: public long write()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 178
end line: 181
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 886
unit: public void checkAccess()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 349
end line: 352
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 887
unit: public void delete()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 374
end line: 377
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 888
unit: public FileStore getFileStore()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 403
end line: 406
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 889
unit: public boolean isHidden()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 497
end line: 500
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 890
unit: public boolean isSameFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 503
end line: 506
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 891
unit: private Path localPathFor()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 508
end line: 511
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 892
unit: public  V getFileStoreAttributeView()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 47
end line: 50
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 893
unit: public boolean supportsFileAttributeView()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 78
end line: 81
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 894
unit: public WatchKey register()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 129
end line: 132
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 895
unit: public WatchKey register()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 135
end line: 138
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 896
unit: protected BundleFileStore getFileStore()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 88
end line: 92
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 897
unit: public Path getPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 113
end line: 116
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 898
unit: private Workflow findNestedWorkflow()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/inspect/ProcessorNames.java
start line: 97
end line: 100
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 899
unit: public Set getMediaTypes()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToJson.java
start line: 63
end line: 66
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 900
unit: public static void main()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/TavernaCommandline.java
start line: 24
end line: 28
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 901
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 256
end line: 259
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 902
unit: public Algorithm()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 36
end line: 39
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 903
unit: void deleteDirectory()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 84
end line: 87
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 904
unit: static void stream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/StreamHelper.java
start line: 51
end line: 54
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 905
unit: static void deleteTempOdfDirectory()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDir.java
start line: 58
end line: 61
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 906
unit: protected void finalize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 121
end line: 124
size: 4 LOC
McCabe index: 2
number of parameters: 0

id: 907
unit: private OdfPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 229
end line: 232
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 908
unit: private OdfPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 247
end line: 250
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 909
unit: public static OdfPackage loadPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 327
end line: 330
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 910
unit: public OdfFileEntry getFileEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 480
end line: 483
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 911
unit: public boolean contains()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 502
end line: 510
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 912
unit: public void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 520
end line: 523
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 913
unit: public void startDocument()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1545
end line: 1548
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 914
unit: public ZipHelper()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1821
end line: 1824
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 915
unit: public ZipHelper()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1826
end line: 1829
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 916
unit: public void setCurrentActivity()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 41
end line: 44
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 917
unit: public void setCurrentProcessorBinding()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 66
end line: 69
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 918
unit: public T2FlowParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 208
end line: 211
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 919
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomobyActivityParser.java
start line: 63
end line: 67
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 920
unit: public Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/FailoverParser.java
start line: 56
end line: 59
size: 4 LOC
McCabe index: 1
number of parameters: 3

id: 921
unit: protected Configuration parseConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java
start line: 64
end line: 67
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 922
unit: public WorkflowSerialisationVisitor()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 305
end line: 308
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 923
unit: public AbstractParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 59
end line: 62
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 924
unit: protected void mapBean()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 89
end line: 92
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 925
unit: public Set getMediaTypes()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 72
end line: 75
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 926
unit: protected void parseDispatchStack()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 133
end line: 148
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 927
unit: public void setCurrentExtensionParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 130
end line: 133
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 928
unit: public ScuflParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 115
end line: 118
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 929
unit: private void parseCoordinations()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 202
end line: 205
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 930
unit: private void parseLinks()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 211
end line: 214
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 931
unit: private void parseWorkflowInputs()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 220
end line: 223
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 932
unit: private void parseWorkflowOutputs()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 233
end line: 236
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 933
unit: private void parseProcessors()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 246
end line: 249
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 934
unit: private void parseProcessorElement()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 325
end line: 328
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 935
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLReader.java
start line: 51
end line: 54
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 936
unit: public InputPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 28
end line: 31
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 937
unit: public InputPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 33
end line: 36
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 938
unit: public Reference()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java
start line: 27
end line: 30
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 939
unit: public Reference()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java
start line: 32
end line: 35
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 940
unit: def check_mime_type()
file: taverna-scufl2-examples/src/main/python/processorNames.py
start line: 0
end line: 0
size: 4 LOC
McCabe index: 2
number of parameters: 1

id: 941
unit: public static void createList()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 159
end line: 162
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 942
unit: private static long getEntryNumber()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 216
end line: 219
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 943
unit: public static Path getPort()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 255
end line: 258
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 944
unit: public static boolean hasInputs()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 270
end line: 273
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 945
unit: public static boolean hasOutputs()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 275
end line: 278
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 946
unit: public static Path newListItem()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 296
end line: 299
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 947
unit: protected static Path withExtension()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 337
end line: 340
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 948
unit: public Processor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 179
end line: 182
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 949
unit: public void setInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 252
end line: 255
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 950
unit: public void setOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 276
end line: 279
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 951
unit: public Configuration getActivityConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 351
end line: 354
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 952
unit: public void setControlLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 170
end line: 173
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 953
unit: public void setDataLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 184
end line: 187
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 954
unit: public void setInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 159
end line: 162
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 955
unit: public void setOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 175
end line: 178
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 956
unit: private static boolean saneParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 113
end line: 116
size: 4 LOC
McCabe index: 3
number of parameters: 1

id: 957
unit: private String escapeName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 266
end line: 269
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 958
unit: private String parseName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 425
end line: 428
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 959
unit: public WorkflowBundle readBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 440
end line: 443
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 960
unit: public Revision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 91
end line: 94
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 961
unit: public void setAdditionOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 132
end line: 135
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 962
unit: public void setHadOriginalSources()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 145
end line: 148
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 963
unit: public void setModificationsOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 154
end line: 157
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 964
unit: public void setRemovalOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 163
end line: 166
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 965
unit: public void setWasAttributedTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 168
end line: 171
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 966
unit: public String getRDFContent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 165
end line: 168
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 967
unit: public void setProfiles()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 170
end line: 173
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 968
unit: public void setWorkflows()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 184
end line: 187
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 969
unit: public void setAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 234
end line: 237
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 970
unit: public boolean visit()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 35
end line: 38
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 971
unit: public boolean visitEnter()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 41
end line: 44
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 972
unit: public final boolean visit()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 147
end line: 150
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 973
unit: protected void cloneInto()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 183
end line: 186
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 974
unit: public NamedSet()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 68
end line: 71
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 975
unit: public List annotationsFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 101
end line: 104
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 976
unit: public void updateBindingByMatchingPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 815
end line: 818
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 977
unit: public AbstractRevisioned()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 48
end line: 51
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 978
unit: public void setActivities()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 152
end line: 155
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 979
unit: public void setConfigurations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 165
end line: 168
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 980
unit: public void setProcessorBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 185
end line: 188
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 981
unit: public void setInputPortBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 192
end line: 195
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 982
unit: public void setOutputPortBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 205
end line: 208
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 983
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 220
end line: 223
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 984
unit: public OutputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputActivityPort.java
start line: 59
end line: 62
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 985
unit: public InputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputActivityPort.java
start line: 59
end line: 62
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 986
unit: public OutputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 64
end line: 67
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 987
unit: public OutputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputProcessorPort.java
start line: 60
end line: 63
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 988
unit: public InputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputWorkflowPort.java
start line: 62
end line: 65
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 989
unit: public InputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputProcessorPort.java
start line: 62
end line: 65
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 990
unit: public CorrectnessVisitor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 89
end line: 92
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 991
unit: public void visitProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 420
end line: 423
size: 4 LOC
McCabe index: 3
number of parameters: 1

id: 992
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/MismatchConfigurableTypeProblem.java
start line: 49
end line: 52
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 993
unit: public NullFieldProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NullFieldProblem.java
start line: 34
end line: 37
size: 4 LOC
McCabe index: 1
number of parameters: 2

id: 994
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NonAbsoluteURIProblem.java
start line: 59
end line: 62
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 995
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/IncompatibleGranularDepthProblem.java
start line: 57
end line: 60
size: 4 LOC
McCabe index: 1
number of parameters: 0

id: 996
unit: public void emptyIterationStrategyTopNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 71
end line: 74
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 997
unit: public void unrecognizedIterationStrategyNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 140
end line: 143
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 998
unit: private void checkStructure()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 83
end line: 86
size: 4 LOC
McCabe index: 1
number of parameters: 1

id: 999
unit: public WfdescAgent()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescAgent.java
start line: 43
end line: 45
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1000
unit: public WfdescAgent()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescAgent.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1001
unit: public Scufl2Tools getScufl2Tools()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1002
unit: public URITools getUriTools()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 88
end line: 90
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1003
unit: private String uriForBean()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 92
end line: 94
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1004
unit: public void setScufl2Tools()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 347
end line: 349
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1005
unit: public void setUriTools()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescSerialiser.java
start line: 351
end line: 353
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1006
unit: public Set getMediaTypes()
file: taverna-scufl2-wfdesc/src/main/java/org/apache/taverna/scufl2/wfdesc/WfdescReader.java
start line: 44
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1007
unit: public static void deleteRecursively()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1008
unit: public static Path getManifestPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 144
end line: 146
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1009
unit: public static boolean isMissing()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 188
end line: 190
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1010
unit: public static boolean isReference()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 192
end line: 194
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1011
unit: public static boolean isValue()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundles.java
start line: 196
end line: 198
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1012
unit: public void setWarnings()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1013
unit: public void setInfoWarnings()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1014
unit: public void setErrorList()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 67
end line: 69
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1015
unit: public ArrayList getErrorList_l()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1016
unit: public ArrayList getInfoWarnings_l()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 82
end line: 84
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1017
unit: public ArrayList getWarnings_l()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1018
unit: public static boolean containsManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1019
unit: private static Path manifestXmlPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFManifest.java
start line: 64
end line: 66
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1020
unit: protected static synchronized Unmarshaller createUnMarshaller()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/odf/ODFJaxb.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1021
unit: public static boolean containsManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1022
unit: private static Path manifestXmlPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 169
end line: 171
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1023
unit: private static String fakeFileURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 263
end line: 265
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1024
unit: private static String fakeFileURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/combine/CombineManifest.java
start line: 267
end line: 270
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1025
unit: public static FileTime now()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1026
unit: public Manifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1027
unit: public List getAggregates()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1028
unit: public List getAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 150
end line: 152
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1029
unit: public List getAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 180
end line: 182
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1030
unit: public List getAuthoredBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 184
end line: 186
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1031
unit: public FileTime getAuthoredOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 188
end line: 190
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1032
unit: public URI getBaseURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 193
end line: 195
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1033
unit: public Bundle getBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 198
end line: 200
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1034
unit: public List getConformsTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 202
end line: 204
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1035
unit: public Agent getCreatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 217
end line: 219
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1036
unit: public FileTime getCreatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 221
end line: 223
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1037
unit: public URI getRetrievedFrom()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 225
end line: 227
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1038
unit: public Agent getRetrievedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 229
end line: 231
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1039
unit: public FileTime getRetrievedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 233
end line: 235
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1040
unit: public List getGraph()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 237
end line: 239
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1041
unit: public List getHistory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 241
end line: 243
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1042
unit: public URI getId()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 245
end line: 247
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1043
unit: public List getManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 249
end line: 251
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1044
unit: public void setAnnotations()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 401
end line: 403
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1045
unit: public void setAuthoredOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 411
end line: 413
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1046
unit: public void setBundle()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 415
end line: 417
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1047
unit: public void setConformsTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 419
end line: 421
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1048
unit: public void setCreatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 423
end line: 425
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1049
unit: public void setCreatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 427
end line: 429
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1050
unit: public void setRetrievedFrom()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 431
end line: 433
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1051
unit: public void setRetrievedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 435
end line: 437
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1052
unit: public void setRetrievedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 439
end line: 441
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1053
unit: public void setGraph()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 443
end line: 445
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1054
unit: public void setId()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 453
end line: 455
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1055
unit: public void setManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 457
end line: 459
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1056
unit: public void writeAsCombineManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 461
end line: 463
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1057
unit: public Path writeAsODFManifest()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Manifest.java
start line: 502
end line: 504
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1058
unit: public PathMetadata()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1059
unit: public List getAuthoredBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1060
unit: public FileTime getAuthoredOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1061
unit: public Proxy getBundledAs()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 74
end line: 76
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1062
unit: public URI getConformsTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1063
unit: public Agent getCreatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 82
end line: 84
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1064
unit: public FileTime getCreatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 86
end line: 88
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1065
unit: public URI getRetrievedFrom()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 90
end line: 92
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1066
unit: public Agent getRetrievedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1067
unit: public FileTime getRetrievedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1068
unit: public Path getFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1069
unit: public String getMediatype()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 117
end line: 119
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1070
unit: public URI getUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 140
end line: 142
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1071
unit: public void setAuthoredOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 151
end line: 153
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1072
unit: public void setConformsTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 163
end line: 165
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1073
unit: public void setCreatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 167
end line: 169
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1074
unit: public void setCreatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 171
end line: 173
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1075
unit: public void setRetrievedFrom()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 175
end line: 177
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1076
unit: public void setRetrievedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 179
end line: 181
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1077
unit: public void setRetrievedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 183
end line: 185
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1078
unit: public void setFolder()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 195
end line: 197
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1079
unit: public void setMediatype()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 199
end line: 201
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1080
unit: public void setProxy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 204
end line: 206
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1081
unit: public void setProxy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 209
end line: 211
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1082
unit: public void generateAnnotationId()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1083
unit: public List getAboutList()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1084
unit: public URI getAnnotion()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 72
end line: 74
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1085
unit: public URI getAnnotation()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1086
unit: public URI getContent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 82
end line: 84
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1087
unit: public URI getUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 86
end line: 88
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1088
unit: private URI relativizeUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 95
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1089
unit: public void setAbout()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1090
unit: public void setAnnotation()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1091
unit: public void setContent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 129
end line: 131
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1092
unit: public void setContent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 133
end line: 135
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1093
unit: public void setUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 137
end line: 140
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1094
unit: public String toString()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathAnnotation.java
start line: 143
end line: 145
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1095
unit: public Agent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 36
end line: 38
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1096
unit: public String getName()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1097
unit: public URI getOrcid()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1098
unit: public URI getUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 48
end line: 50
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1099
unit: public void setName()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 52
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1100
unit: public void setOrcid()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1101
unit: public void setUri()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1102
unit: public ClosableIterable()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1103
unit: public void close()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1104
unit: public ExtendedIterator iterator()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1105
unit: private static  ClosableIterable iterate()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 86
end line: 88
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1106
unit: protected static URI makeBaseURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/RDFToManifest.java
start line: 109
end line: 111
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1107
unit: public Agent getAggregatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1108
unit: public FileTime getAggregatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1109
unit: public String getFilename()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1110
unit: public Path getFolder()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1111
unit: public URI getURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1112
unit: public void setAggregatedBy()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 72
end line: 74
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1113
unit: public void setAggregatedOn()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1114
unit: public void setFilename()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1115
unit: public void setFolder()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1116
unit: public void setURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 88
end line: 90
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1117
unit: public void setURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Proxy.java
start line: 92
end line: 94
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1118
unit: public static URI relativizeFromBase()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/PathHelper.java
start line: 28
end line: 30
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1119
unit: public static URI relativizeFromBase()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/utils/PathHelper.java
start line: 32
end line: 34
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1120
unit: public void close()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1121
unit: public FileSystem getFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 79
end line: 81
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1122
unit: public Path getPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 92
end line: 94
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1123
unit: public Path getRoot()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1124
unit: public boolean isDeleteOnClose()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 105
end line: 107
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1125
unit: public void setDeleteOnClose()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/Bundle.java
start line: 130
end line: 132
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1126
unit: public void force()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1127
unit: protected void implCloseChannel()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 96
end line: 99
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1128
unit: public long position()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 114
end line: 116
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1129
unit: public FileChannel position()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 119
end line: 121
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1130
unit: public int read()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1131
unit: public int read()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 129
end line: 131
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1132
unit: public long size()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 140
end line: 142
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1133
unit: public FileChannel truncate()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 157
end line: 159
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1134
unit: public int write()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 168
end line: 170
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1135
unit: public int write()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 173
end line: 175
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1136
unit: public boolean equals()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 380
end line: 382
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1137
unit: public String getScheme()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 487
end line: 489
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1138
unit: public int hashCode()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 492
end line: 494
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1139
unit: private FileSystemProvider origProvider()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 667
end line: 669
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1140
unit: public Object getAttribute()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1141
unit: public long getTotalSpace()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1142
unit: public long getUnallocatedSpace()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1143
unit: public long getUsableSpace()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 63
end line: 65
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1144
unit: public boolean isReadOnly()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1145
unit: public String name()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1146
unit: public boolean supportsFileAttributeView()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1147
unit: public String toString()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1148
unit: public String type()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileStore.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1149
unit: public int compareTo()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1150
unit: public boolean endsWith()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1151
unit: public boolean endsWith()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1152
unit: public BundlePath getFileName()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1153
unit: public BundleFileSystem getFileSystem()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1154
unit: public BundlePath getName()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 85
end line: 87
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1155
unit: public int getNameCount()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 90
end line: 92
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1156
unit: public BundlePath getParent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1157
unit: public BundlePath getRoot()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1158
unit: protected Path getZipPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 104
end line: 106
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1159
unit: public int hashCode()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 109
end line: 111
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1160
unit: public boolean isAbsolute()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 114
end line: 116
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1161
unit: public Iterator iterator()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 119
end line: 121
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1162
unit: public BundlePath normalize()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1163
unit: public BundlePath relativize()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 141
end line: 143
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1164
unit: public BundlePath resolve()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 146
end line: 148
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1165
unit: public BundlePath resolve()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 151
end line: 153
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1166
unit: public BundlePath resolveSibling()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 156
end line: 158
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1167
unit: public BundlePath resolveSibling()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 161
end line: 163
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1168
unit: public boolean startsWith()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 166
end line: 168
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1169
unit: public boolean startsWith()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 171
end line: 173
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1170
unit: public BundlePath subpath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 176
end line: 178
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1171
unit: public BundlePath toAbsolutePath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 181
end line: 183
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1172
unit: public File toFile()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 186
end line: 188
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1173
unit: public BundlePath toRealPath()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundlePath.java
start line: 191
end line: 193
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1174
unit: public URI getBaseURI()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1175
unit: public Iterable getFileStores()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1176
unit: public Iterable getRootDirectories()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 131
end line: 133
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1177
unit: public BundlePath getRootDirectory()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 135
end line: 137
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1178
unit: public String getSeparator()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 140
end line: 142
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1179
unit: public Path getSource()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 144
end line: 146
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1180
unit: public UserPrincipalLookupService getUserPrincipalLookupService()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 149
end line: 151
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1181
unit: public boolean isReadOnly()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 162
end line: 164
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1182
unit: public WatchService newWatchService()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 167
end line: 169
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1183
unit: public BundleFileSystemProvider provider()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystem.java
start line: 172
end line: 174
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1184
unit: public boolean getCheck()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/validate/Validate.java
start line: 147
end line: 149
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1185
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 32
end line: 34
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1186
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1187
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 50
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1188
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1189
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1190
unit: public String getMediaType()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/Tools.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1191
unit: public static String getInFile()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 167
end line: 169
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1192
unit: public static String getOutFile()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 171
end line: 173
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1193
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 183
end line: 185
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1194
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 317
end line: 322
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1195
unit: public void execute()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 341
end line: 345
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1196
unit: public void setChecksumType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1197
unit: public String getChecksumType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1198
unit: public void setChecksum()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1199
unit: public String getChecksum()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1200
unit: public void setAlgorithm()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1201
unit: public Algorithm getAlgorithm()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1202
unit: public void setKeyDerivation()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1203
unit: public KeyDerivation getKeyDerivation()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 74
end line: 76
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1204
unit: public void setName()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1205
unit: public String getName()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1206
unit: public void setInitializationVector()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1207
unit: public String getInitializationVector()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1208
unit: public void setName()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 43
end line: 45
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1209
unit: public String getName()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1210
unit: public void setSalt()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1211
unit: public String getSalt()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1212
unit: public void setIterationCount()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1213
unit: public int getIterationCount()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 63
end line: 65
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1214
unit: public void setPath()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 52
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1215
unit: public String getPath()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1216
unit: public void setMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1217
unit: public String getMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 64
end line: 66
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1218
unit: public static String getMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1219
unit: public void setSize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1220
unit: public int getSize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1221
unit: public void setEncryptionData()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1222
unit: public EncryptionData getEncryptionData()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1223
unit: public String getVersion()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1224
unit: public void setVersion()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1225
unit: public boolean isOutput()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1226
unit: public OdfFileEntry geFileEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1227
unit: public String getName()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 72
end line: 74
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1228
unit: public OdfPackage getPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackageStream.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1229
unit: private TempDirDeleter()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1230
unit: synchronized boolean add()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1231
unit: synchronized boolean remove()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/TempDirDeleter.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1232
unit: public String getPath()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 137
end line: 139
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1233
unit: public static OdfPackage loadPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 290
end line: 292
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1234
unit: public static OdfPackage loadPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 308
end line: 310
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1235
unit: void setBaseURI()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 433
end line: 435
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1236
unit: public String getBaseURI()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 443
end line: 445
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1237
unit: public String getMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 453
end line: 455
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1238
unit: public Set getFileEntries()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 490
end line: 492
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1239
unit: public void save()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 547
end line: 549
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1240
unit: public boolean hasDom()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 898
end line: 900
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1241
unit: public OutputStream insertOutputStream()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1428
end line: 1430
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1242
unit: private String encodeXMLAttributes()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1526
end line: 1528
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1243
unit: public void startPrefixMapping()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1561
end line: 1563
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1244
unit: public void characters()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1650
end line: 1652
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1245
unit: public void ignorableWhitespace()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1658
end line: 1660
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1246
unit: public void processingInstruction()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1666
end line: 1668
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1247
unit: public UCFPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1248
unit: public UCFPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 105
end line: 107
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1249
unit: public String getPackageMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 141
end line: 143
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1250
unit: public Map listResources()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 347
end line: 349
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1251
unit: public Map listResources()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 351
end line: 353
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1252
unit: public String getPath()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 406
end line: 408
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1253
unit: public long getSize()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 410
end line: 412
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1254
unit: public String getMediaType()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 414
end line: 416
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1255
unit: public boolean isFolder()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 418
end line: 420
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1256
unit: public UCFPackage getUcfPackage()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 422
end line: 424
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1257
unit: public String getVersion()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 446
end line: 448
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1258
unit: public Map listAllResources()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 451
end line: 453
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1259
unit: public void setRootFile()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 455
end line: 457
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1260
unit: protected JAXBElement getContainerXML()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 570
end line: 572
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1261
unit: public String getRootFileVersion()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/UCFPackage.java
start line: 641
end line: 643
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1262
unit: public Profile getCurrentProfile()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1263
unit: public void setCurrentProfile()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1264
unit: public Processor getCurrentProcessor()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1265
unit: public void setCurrentProcessor()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1266
unit: public ProcessorBinding getCurrentProcessorBinding()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1267
unit: public WorkflowBundle getCurrentWorkflowBundle()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 71
end line: 73
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1268
unit: public void setCurrentWorkflowBundle()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1269
unit: public T2Parser getCurrentT2Parser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 79
end line: 81
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1270
unit: public void setCurrentT2Parser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 83
end line: 85
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1271
unit: public Workflow getCurrentWorkflow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1272
unit: public void setCurrentWorkflow()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1273
unit: public String getPreviousDispatchLayerName()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 107
end line: 109
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1274
unit: public final T2FlowParser getT2FlowParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 111
end line: 113
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1275
unit: public void setT2FlowParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 115
end line: 118
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1276
unit: public Configuration getCurrentConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1277
unit: public void setCurrentConfiguration()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1278
unit: public Configurable getCurrentConfigurable()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 128
end line: 130
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1279
unit: public void setCurrentConfigurable()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 132
end line: 134
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1280
unit: public void setPreviousDispatchLayerName()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/ParserState.java
start line: 136
end line: 138
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1281
unit: protected ParserState initialValue()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 182
end line: 184
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1282
unit: public final boolean isValidating()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 196
end line: 198
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1283
unit: public final void setValidating()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 200
end line: 202
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1284
unit: public synchronized void setT2Parsers()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 327
end line: 329
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1285
unit: public boolean isStrict()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 331
end line: 333
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1286
unit: public void setStrict()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowParser.java
start line: 1211
end line: 1213
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1287
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/DataflowActivityParser.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1288
unit: public void setUriTools()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/DataflowActivityParser.java
start line: 79
end line: 81
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1289
unit: public URITools getUriTools()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/DataflowActivityParser.java
start line: 83
end line: 85
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1290
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ComponentActivityParser.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1291
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BeanshellActivityParser.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1292
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/InteractionActivityParser.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1293
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SpreadsheetActivityParser.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1294
unit: public List getAdditionalSchemas()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/AbstractActivityParser.java
start line: 229
end line: 231
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1295
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/SoaplabActivityParser.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1296
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/RshellActivityParser.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1297
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/StringConstantActivityParser.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1298
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/WSDLActivityParser.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1299
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/ApiConsomerActivityParser.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1300
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultactivities/BiomartActivityParser.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1301
unit: private DelayedCloseBufferedInputStream()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1302
unit: public void close()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1303
unit: public void reallyClose()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1304
unit: public Set getMediaTypes()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1305
unit: public void setParser()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/T2FlowReader.java
start line: 154
end line: 156
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1306
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/RESTActivityParser.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1307
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/XPathActivityParser.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1308
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/t23activities/ExternalToolActivityParser.java
start line: 112
end line: 114
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1309
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ErrorBounceParser.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1310
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/InvokeParser.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1311
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/ParallelizeParser.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1312
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/RetryParser.java
start line: 69
end line: 71
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1313
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/FailoverParser.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1314
unit: public URI mapT2flowRavenIdToScufl2URI()
file: taverna-scufl2-t2flow/src/main/java/org/apache/taverna/scufl2/translator/t2flow/defaultdispatchstack/LoopParser.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1315
unit: public Map getBeanToUri()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1316
unit: public URI getCurrentBase()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 64
end line: 66
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1317
unit: public URI getLocation()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1318
unit: public Stack getStack()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 72
end line: 74
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1319
unit: public UCFPackage getUcfPackage()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1320
unit: public Map getUriToBean()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1321
unit: public WorkflowBean peek()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1322
unit: public WorkflowBean pop()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 88
end line: 90
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1323
unit: public void push()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 92
end line: 94
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1324
unit: public void setBeanToUri()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1325
unit: public void setCurrentBase()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1326
unit: public void setLocation()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 104
end line: 106
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1327
unit: public void setStack()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 108
end line: 110
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1328
unit: public void setUcfPackage()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 112
end line: 114
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1329
unit: public void setUriToBean()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 116
end line: 118
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1330
unit: public Map getDispatchConfigs()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1331
unit: public void setDispatchConfigs()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ParserState.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1332
unit: public ProfileSerialisationVisitor()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1333
unit: private String uri()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 257
end line: 259
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1334
unit: public boolean visitEnter()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 285
end line: 287
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1335
unit: public boolean visitLeave()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 290
end line: 292
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1336
unit: public boolean visitEnter()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 525
end line: 527
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1337
unit: public RDFXMLSerializer()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 631
end line: 633
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1338
unit: public WorkflowBundle getWfBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 671
end line: 673
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1339
unit: public boolean isUsingSchema()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 675
end line: 677
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1340
unit: public void setJaxbContext()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 784
end line: 786
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1341
unit: public void setUsingSchema()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 816
end line: 818
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1342
unit: public void setWfBundle()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 820
end line: 822
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1343
unit: protected ParserState initialValue()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1344
unit: public AbstractParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1345
unit: protected void clearParserState()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 64
end line: 66
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1346
unit: protected ParserState getParserState()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1347
unit: protected URI resolve()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/AbstractParser.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1348
unit: public static final URITools getUriTools()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 58
end line: 60
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1349
unit: public static final void setUriTools()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLWriter.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1350
unit: public WorkflowParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1351
unit: public Set getMediaTypes()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLReader.java
start line: 43
end line: 45
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1352
unit: public ProfileParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1353
unit: public ProfileParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 64
end line: 66
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1354
unit: protected void parseProfileSecond()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/ProfileParser.java
start line: 299
end line: 302
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1355
unit: public ParserState getParserState()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/AbstractExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1356
unit: public void setParserState()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/AbstractExtensionParser.java
start line: 48
end line: 50
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1357
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomartExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1358
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomartExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1359
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/WsdlExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1360
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/WsdlExtensionParser.java
start line: 55
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1361
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/ApiConsumerExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1362
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/ApiConsumerExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1363
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/AbstractProcessorExtensionParser.java
start line: 36
end line: 38
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1364
unit: public List getAdditionalSchemas()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/AbstractProcessorExtensionParser.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1365
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/AbstractProcessorExtensionParser.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1366
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/StringConstantExtensionParser.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1367
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BiomobyExtensionParser.java
start line: 59
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1368
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BeanshellExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1369
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/BeanshellExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1370
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/RshellExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1371
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/RshellExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1372
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/SoaplabExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1373
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/SoaplabExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1374
unit: public boolean canHandle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/LocalExtensionParser.java
start line: 40
end line: 42
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1375
unit: public void parseScuflObject()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/processorelement/LocalExtensionParser.java
start line: 56
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1376
unit: public void setCurrentWorkflowBundle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1377
unit: public WorkflowBundle getCurrentWorkflowBundle()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1378
unit: public void setCurrentProfile()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1379
unit: public Profile getCurrentProfile()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1380
unit: public ScuflParser getCurrentParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1381
unit: public void setCurrentParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 81
end line: 83
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1382
unit: public void setCurrentWorkflow()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1383
unit: public Workflow getCurrentWorkflow()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1384
unit: public void addMapping()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1385
unit: public Processor getCurrentProcessor()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 107
end line: 109
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1386
unit: public void setCurrentProcessor()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 115
end line: 117
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1387
unit: public ScuflExtensionParser getCurrentExtensionParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 122
end line: 124
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1388
unit: public Activity getCurrentActivity()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 138
end line: 140
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1389
unit: public void setCurrentActivity()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ParserState.java
start line: 146
end line: 148
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1390
unit: public Set getMediaTypes()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1391
unit: public void setParser()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflReader.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1392
unit: protected ParserState initialValue()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 106
end line: 108
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1393
unit: public boolean isStrict()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 451
end line: 453
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1394
unit: public void setStrict()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 459
end line: 461
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1395
unit: public boolean isValidating()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 466
end line: 468
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1396
unit: public void setValidating()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 474
end line: 476
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1397
unit: public String getTitle()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1398
unit: public String getCreator()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 131
end line: 133
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1399
unit: public String getExampleValue()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 135
end line: 137
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1400
unit: public String getDescription()
file: taverna-scufl2-annotation/src/main/java/org/apache/taverna/scufl2/annotation/AnnotationTools.java
start line: 139
end line: 141
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1401
unit: public CWLParser()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLParser.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1402
unit: public Set parseSteps()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLParser.java
start line: 39
end line: 41
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1403
unit: public Set getMediaTypes()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/CWLReader.java
start line: 37
end line: 39
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1404
unit: public String getName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 38
end line: 40
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1405
unit: public void setName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1406
unit: public String getSource()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1407
unit: public void setSource()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/InputPort.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1408
unit: public WorkflowProcess()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1409
unit: public Map getWorkflowInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 168
end line: 170
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1410
unit: public void setWorkflowInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 172
end line: 174
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1411
unit: public Map getWorkflowOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 176
end line: 178
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1412
unit: public void setWorkflowOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 180
end line: 182
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1413
unit: public Map getWorkflowProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 184
end line: 186
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1414
unit: public void setWorkflowProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 188
end line: 190
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1415
unit: public Map getProcessorInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 192
end line: 194
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1416
unit: public void setProcessorInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 196
end line: 198
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1417
unit: public Map getProcessorOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 200
end line: 202
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1418
unit: public void setProcessorOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 204
end line: 206
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1419
unit: public Set getDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 208
end line: 210
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1420
unit: public void setDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 212
end line: 214
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1421
unit: public Set getProcesses()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 216
end line: 218
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1422
unit: public void setProcesses()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/WorkflowProcess.java
start line: 220
end line: 222
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1423
unit: public String getId()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 33
end line: 35
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1424
unit: public void setId()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 37
end line: 39
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1425
unit: public int getDepth()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1426
unit: public void setDepth()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1427
unit: public String getDescription()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1428
unit: public void setDescription()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1429
unit: public String getLabel()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1430
unit: public void setLabel()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1431
unit: public ArrayList getFormat()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1432
unit: public void setFormat()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1433
unit: public void addFormat()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/PortDetail.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1434
unit: public Set getInputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 37
end line: 39
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1435
unit: public void setInputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1436
unit: public Set getOutputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1437
unit: public void setOutputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1438
unit: public Set getInsideInputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1439
unit: public void setInsideInputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1440
unit: public Set getInsideOutputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1441
unit: public void setInsideOutputPorts()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1442
unit: public String getName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 69
end line: 71
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1443
unit: public void setName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Process.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1444
unit: public String toString()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1445
unit: public String getSource()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1446
unit: public String getBaseCommand()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/CommandLineTool.java
start line: 82
end line: 84
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1447
unit: public String getId()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1448
unit: public void setId()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1449
unit: public Process getRun()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1450
unit: public void setRun()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1451
unit: public void addInput()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1452
unit: public void setInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1453
unit: public Set getInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1454
unit: public void addOutput()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 69
end line: 71
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1455
unit: public void setOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1456
unit: public Set getOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1457
unit: public String toString()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 81
end line: 83
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1458
unit: public int hashCode()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Step.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1459
unit: public OutputPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/OutputPort.java
start line: 26
end line: 28
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1460
unit: public OutputPort()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/OutputPort.java
start line: 30
end line: 32
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1461
unit: public String getName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/OutputPort.java
start line: 34
end line: 36
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1462
unit: public void setName()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/OutputPort.java
start line: 38
end line: 40
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1463
unit: public Converter()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/Converter.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1464
unit: public WorkflowParser()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1465
unit: public Map getWorkflowInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 187
end line: 189
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1466
unit: public void setWorkflowInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 191
end line: 193
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1467
unit: public Map getWorkflowOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 195
end line: 197
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1468
unit: public void setWorkflowOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 199
end line: 201
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1469
unit: public Map getWorkflowProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 203
end line: 205
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1470
unit: public void setWorkflowProcessors()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 207
end line: 209
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1471
unit: public Map getProcessorInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 211
end line: 213
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1472
unit: public void setProcessorInputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 215
end line: 217
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1473
unit: public Map getProcessorOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 219
end line: 221
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1474
unit: public void setProcessorOutputs()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 223
end line: 225
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1475
unit: public Set getDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 227
end line: 229
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1476
unit: public void setDataLinks()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/WorkflowParser.java
start line: 231
end line: 233
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1477
unit: public YAMLHelper()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1478
unit: public JsonNode getNameSpace()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1479
unit: public Map processInputDepths()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1480
unit: public Map processOutputDepths()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1481
unit: public Map processInputDetails()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 104
end line: 106
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1482
unit: public Map processOutputDetails()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/YAMLHelper.java
start line: 108
end line: 110
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1483
unit: public List getCausedBy()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 33
end line: 35
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1484
unit: public String getMessage()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 37
end line: 39
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1485
unit: public String getTrace()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 41
end line: 43
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1486
unit: public String toString()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/ErrorDocument.java
start line: 64
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1487
unit: private ExtensionIgnoringFilter()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 92
end line: 94
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1488
unit: public boolean accept()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 97
end line: 99
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1489
unit: private static Path anyExtension()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 119
end line: 121
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1490
unit: public static boolean isError()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 280
end line: 282
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1491
unit: public static boolean isList()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 284
end line: 286
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1492
unit: public static boolean isMissing()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 288
end line: 290
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1493
unit: public static boolean isValue()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 292
end line: 294
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1494
unit: public static Path getWorkflowRunProvenance()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 354
end line: 356
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1495
unit: public static Path getWorkflowRunReport()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 358
end line: 360
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1496
unit: public static Path getWorkflow()
file: taverna-databundle/src/main/java/org/apache/taverna/databundle/DataBundles.java
start line: 378
end line: 380
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1497
unit: public Configuration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 97
end line: 99
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1498
unit: public Configuration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 108
end line: 110
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1499
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1500
unit: public Configurable getConfigures()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1501
unit: public Profile getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 130
end line: 132
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1502
unit: public JsonNode getJson()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 143
end line: 145
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1503
unit: public String getJsonAsString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 153
end line: 155
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1504
unit: public URI getType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 181
end line: 183
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1505
unit: public void setConfigures()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 192
end line: 194
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1506
unit: public void setType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 233
end line: 235
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1507
unit: public JsonNode getJsonSchema()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 244
end line: 246
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1508
unit: public void setJsonSchema()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 248
end line: 250
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1509
unit: public void setJsonSchema()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 252
end line: 254
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1510
unit: public void setJson()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/configurations/Configuration.java
start line: 256
end line: 258
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1511
unit: public int compare()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/NullSafeComparator.java
start line: 102
end line: 104
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1512
unit: public LazyMap()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/LazyMap.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1513
unit: public LazyMap()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/LazyMap.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1514
unit: public LazyMap()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/LazyMap.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1515
unit: public LazyMap()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/impl/LazyMap.java
start line: 63
end line: 65
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1516
unit: public DataLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1517
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 93
end line: 95
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1518
unit: public Integer getMergePosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 183
end line: 185
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1519
unit: public Workflow getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 195
end line: 197
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1520
unit: public SenderPort getReceivesFrom()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 206
end line: 208
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1521
unit: public ReceiverPort getSendsTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 217
end line: 219
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1522
unit: public void setMergePosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 249
end line: 251
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1523
unit: public void setReceivesFrom()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 270
end line: 272
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1524
unit: public void setSendsTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 282
end line: 284
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1525
unit: public Collection getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 309
end line: 311
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1526
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 319
end line: 321
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1527
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/DataLink.java
start line: 329
end line: 331
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1528
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1529
unit: public Processor getBlock()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 131
end line: 133
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1530
unit: public Workflow getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 136
end line: 138
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1531
unit: public Processor getUntilFinished()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 145
end line: 147
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1532
unit: public void setBlock()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 170
end line: 172
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1533
unit: public void setUntilFinished()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 190
end line: 192
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1534
unit: public Collection getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 219
end line: 221
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1535
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 229
end line: 231
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1536
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 239
end line: 241
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1537
unit: public Processor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 164
end line: 166
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1538
unit: public NamedSet getInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 208
end line: 210
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1539
unit: public IterationStrategyStack getIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 219
end line: 221
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1540
unit: public NamedSet getOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 231
end line: 233
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1541
unit: public Workflow getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 243
end line: 245
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1542
unit: public URI getType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 291
end line: 293
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1543
unit: public void setType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 296
end line: 298
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1544
unit: public List getConfigurations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 310
end line: 312
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1545
unit: public Configuration getConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 326
end line: 328
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1546
unit: public Configuration createConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 338
end line: 340
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1547
unit: public Activity createActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 364
end line: 366
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1548
unit: public Workflow getNestedWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 377
end line: 379
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1549
unit: public List controlLinksBlocking()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 388
end line: 390
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1550
unit: public List controlLinksWaitingFor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 399
end line: 401
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1551
unit: public ProcessorBinding getBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 415
end line: 417
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1552
unit: public Activity getActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 432
end line: 434
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1553
unit: public Set getPossibleDownStreamProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 444
end line: 446
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1554
unit: public Set getPossibleUpStreamProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Processor.java
start line: 456
end line: 458
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1555
unit: public Workflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1556
unit: public Set getControlLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1557
unit: public Set getDataLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 114
end line: 116
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1558
unit: public NamedSet getInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 126
end line: 128
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1559
unit: public NamedSet getOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 139
end line: 141
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1560
unit: public WorkflowBundle getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 144
end line: 146
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1561
unit: public NamedSet getProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 155
end line: 157
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1562
unit: public void updateWorkflowIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 254
end line: 256
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1563
unit: protected URI getIdentifierRoot()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 273
end line: 275
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1564
unit: public Activity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1565
unit: public Activity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 79
end line: 81
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1566
unit: public URI getType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1567
unit: public NamedSet getInputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 115
end line: 117
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1568
unit: public NamedSet getOutputPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 128
end line: 130
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1569
unit: public Profile getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 133
end line: 135
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1570
unit: public void setType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 144
end line: 146
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1571
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 190
end line: 192
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1572
unit: public List getConfigurations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 209
end line: 211
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1573
unit: public Configuration getConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 223
end line: 225
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1574
unit: public Configuration createConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 238
end line: 240
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1575
unit: public void createPorts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 247
end line: 249
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1576
unit: public List getBoundProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 258
end line: 260
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1577
unit: public ProcessorBinding createProcessorAndBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/activity/Activity.java
start line: 267
end line: 269
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1578
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1579
unit: public IterationStrategyParent getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1580
unit: public WorkflowBean clone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1581
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/CrossProduct.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1582
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1583
unit: public Integer getDesiredDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1584
unit: public InputProcessorPort getInputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1585
unit: public IterationStrategyParent getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1586
unit: public void setDesiredDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1587
unit: public void setInputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 74
end line: 76
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1588
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 146
end line: 148
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1589
unit: public Collection getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 165
end line: 167
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1590
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 175
end line: 177
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1591
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 185
end line: 187
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1592
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 49
end line: 51
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1593
unit: public IterationStrategyParent getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1594
unit: public WorkflowBean clone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 97
end line: 99
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1595
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/DotProduct.java
start line: 102
end line: 104
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1596
unit: public IterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1597
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 2
number of parameters: 1

id: 1598
unit: public Processor getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1599
unit: public WorkflowBean clone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1600
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 83
end line: 85
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1601
unit: public WriterException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WriterException.java
start line: 50
end line: 52
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1602
unit: public WriterException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WriterException.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1603
unit: public WriterException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WriterException.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1604
unit: public ReaderException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/ReaderException.java
start line: 48
end line: 50
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1605
unit: public ReaderException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/ReaderException.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1606
unit: public ReaderException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/ReaderException.java
start line: 71
end line: 73
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1607
unit: private void append()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1608
unit: public Set getMediaTypes()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureWriter.java
start line: 272
end line: 274
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1609
unit: public Set getMediaTypes()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/structure/StructureReader.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1610
unit: public void setReaders()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 423
end line: 425
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1611
unit: public void setWriters()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WorkflowBundleIO.java
start line: 435
end line: 437
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1612
unit: public Set getAdditionOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1613
unit: public URI getChangeSpecificationType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1614
unit: public Calendar getGeneratedAtTime()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 104
end line: 106
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1615
unit: public Set getHadOriginalSources()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 108
end line: 110
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1616
unit: public URI getIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 112
end line: 114
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1617
unit: public Set getModificationsOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 116
end line: 118
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1618
unit: public Revision getPreviousRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1619
unit: public Set getRemovalOf()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1620
unit: public Set getWasAttributedTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 128
end line: 130
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1621
unit: public void setChangeSpecificationType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 137
end line: 139
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1622
unit: public void setGeneratedAtTime()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 141
end line: 143
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1623
unit: public void setIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 150
end line: 152
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1624
unit: public void setPreviousRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 159
end line: 161
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1625
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 174
end line: 176
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1626
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 196
end line: 198
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1627
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 246
end line: 248
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1628
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 256
end line: 258
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1629
unit: public Annotation()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 53
end line: 55
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1630
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1631
unit: public Calendar getAnnotatedAt()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1632
unit: public URI getAnnotatedBy()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 69
end line: 71
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1633
unit: public Calendar getSerializedAt()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1634
unit: public URI getSerializedBy()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 77
end line: 79
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1635
unit: public void setAnnotatedAt()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1636
unit: public void setAnnotatedBy()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1637
unit: public void setSerializedAt()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1638
unit: public void setSerializedBy()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1639
unit: public WorkflowBundle getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 110
end line: 112
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1640
unit: public URI getBody()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 123
end line: 125
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1641
unit: public void setBody()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 127
end line: 129
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1642
unit: public String getResourcePath()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 153
end line: 155
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1643
unit: public static URI generateIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1644
unit: public WorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 93
end line: 95
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1645
unit: public WorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 104
end line: 106
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1646
unit: public Profile getMainProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 123
end line: 125
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1647
unit: public Workflow getMainWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 127
end line: 129
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1648
unit: public NamedSet getProfiles()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 131
end line: 133
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1649
unit: public URI getGlobalBaseURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 150
end line: 152
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1650
unit: public NamedSet getWorkflows()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 154
end line: 156
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1651
unit: public void setResources()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 175
end line: 177
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1652
unit: public void setGlobalBaseURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 180
end line: 182
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1653
unit: public boolean equals()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 217
end line: 219
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1654
unit: public int hashCode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 222
end line: 224
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1655
unit: public NamedSet getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 230
end line: 232
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1656
unit: protected URI getIdentifierRoot()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 250
end line: 252
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1657
unit: public WorkflowBean resolveURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/container/WorkflowBundle.java
start line: 274
end line: 276
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1658
unit: public CopyVisitor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 30
end line: 32
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1659
unit: public boolean visitLeave()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1660
unit: public AbstractCloneable clone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1661
unit: public Cloning()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1662
unit: public  T getCloned()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 138
end line: 140
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1663
unit: public  void knownClone()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractCloneable.java
start line: 142
end line: 144
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1664
unit: public boolean visit()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 71
end line: 73
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1665
unit: public boolean visitEnter()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1666
unit: public boolean visitLeave()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 81
end line: 83
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1667
unit: public WorkflowBean getCurrentNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 95
end line: 97
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1668
unit: public Stack getCurrentPath()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1669
unit: public boolean visitLeave()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Visitor.java
start line: 178
end line: 180
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1670
unit: public AbstractNamed()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 43
end line: 45
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1671
unit: public AbstractNamed()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1672
unit: public String getName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 133
end line: 135
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1673
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 178
end line: 180
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1674
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 209
end line: 211
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1675
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractNamed.java
start line: 220
end line: 222
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1676
unit: public NamedSet()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1677
unit: public boolean add()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1678
unit: public void clear()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 136
end line: 138
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1679
unit: public Comparator comparator()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 156
end line: 158
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1680
unit: public boolean containsName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 187
end line: 189
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1681
unit: public T first()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 192
end line: 194
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1682
unit: public T getByName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 205
end line: 207
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1683
unit: public Set getNames()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 214
end line: 216
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1684
unit: public boolean isEmpty()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 227
end line: 229
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1685
unit: public Iterator iterator()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 232
end line: 234
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1686
unit: public T last()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 237
end line: 239
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1687
unit: public Iterator nameIterator()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 241
end line: 243
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1688
unit: public T removeByName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 268
end line: 270
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1689
unit: public int size()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/NamedSet.java
start line: 273
end line: 275
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1690
unit: public int compare()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1691
unit: public Processor getSplitPoint()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 499
end line: 501
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1692
unit: public Set getUpStream()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 508
end line: 510
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1693
unit: public Set getDownStream()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 517
end line: 519
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1694
unit: public Set getUnconnected()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/Scufl2Tools.java
start line: 535
end line: 537
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1695
unit: protected URI generateNewIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1696
unit: public Revision newRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1697
unit: public Revision getCurrentRevision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1698
unit: public void setIdentifier()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/common/AbstractRevisioned.java
start line: 111
end line: 113
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1699
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1700
unit: public OutputActivityPort getBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 90
end line: 92
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1701
unit: public OutputProcessorPort getBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1702
unit: public ProcessorBinding getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 105
end line: 107
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1703
unit: public void setBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 118
end line: 120
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1704
unit: public void setBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 129
end line: 131
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1705
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 143
end line: 145
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1706
unit: public Profile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1707
unit: public Profile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 71
end line: 73
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1708
unit: public NamedSet getActivities()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 100
end line: 102
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1709
unit: public NamedSet getConfigurations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 111
end line: 113
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1710
unit: public WorkflowBundle getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 116
end line: 118
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1711
unit: public NamedSet getProcessorBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1712
unit: public final Integer getProfilePosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 141
end line: 143
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1713
unit: public final void setProfilePosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 202
end line: 204
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1714
unit: protected URI getIdentifierRoot()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/Profile.java
start line: 210
end line: 212
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1715
unit: public InputActivityPort getBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 84
end line: 86
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1716
unit: public InputProcessorPort getBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1717
unit: public ProcessorBinding getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1718
unit: public void setBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 112
end line: 114
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1719
unit: public void setBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 123
end line: 125
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1720
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 137
end line: 139
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1721
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1722
unit: public A getBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 76
end line: 78
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1723
unit: public P getBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1724
unit: public void setBoundActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1725
unit: public void setBoundProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 111
end line: 113
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1726
unit: public Collection getAnnotations()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 133
end line: 135
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1727
unit: public URI getURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 143
end line: 145
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1728
unit: public URI getRelativeURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorPortBinding.java
start line: 153
end line: 155
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1729
unit: public final Integer getActivityPosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 91
end line: 93
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1730
unit: public Activity getBoundActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 102
end line: 104
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1731
unit: public Processor getBoundProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1732
unit: public Set getInputPortBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1733
unit: public Set getOutputPortBindings()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 135
end line: 137
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1734
unit: public Profile getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 140
end line: 142
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1735
unit: public void setActivityPosition()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 156
end line: 158
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1736
unit: public void setBoundActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 168
end line: 170
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1737
unit: public void setBoundProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorBinding.java
start line: 180
end line: 182
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1738
unit: public AbstractGranularDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractGranularDepthPort.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1739
unit: public AbstractGranularDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractGranularDepthPort.java
start line: 59
end line: 61
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1740
unit: public Integer getGranularDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractGranularDepthPort.java
start line: 69
end line: 71
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1741
unit: public void setGranularDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractGranularDepthPort.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1742
unit: public Activity getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputActivityPort.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1743
unit: public Activity getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputActivityPort.java
start line: 65
end line: 67
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1744
unit: public OutputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1745
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1746
unit: public Workflow getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1747
unit: public List getDatalinksTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputWorkflowPort.java
start line: 96
end line: 98
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1748
unit: public OutputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputProcessorPort.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1749
unit: public Processor getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputProcessorPort.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1750
unit: public List getDatalinksFrom()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputProcessorPort.java
start line: 87
end line: 89
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1751
unit: public AbstractDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1752
unit: public AbstractDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 55
end line: 57
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1753
unit: public boolean accept()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1754
unit: public Integer getDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1755
unit: public void setDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/AbstractDepthPort.java
start line: 81
end line: 83
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1756
unit: public InputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputWorkflowPort.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1757
unit: public Workflow getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputWorkflowPort.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1758
unit: public List getDatalinksFrom()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputWorkflowPort.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1759
unit: public InputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputProcessorPort.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1760
unit: public Processor getParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputProcessorPort.java
start line: 68
end line: 70
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1761
unit: public List getDatalinksTo()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputProcessorPort.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1762
unit: public ValidationException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/ValidationException.java
start line: 32
end line: 34
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1763
unit: public ValidationException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/ValidationException.java
start line: 36
end line: 38
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1764
unit: public ValidationProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/ValidationProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1765
unit: public WorkflowBean getBean()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/ValidationProblem.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1766
unit: public boolean isCheckComplete()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1767
unit: private WorkflowBean peekPath()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1768
unit: public Configurable getConfigurable()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/MismatchConfigurableTypeProblem.java
start line: 44
end line: 46
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1769
unit: public String getFieldName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NullFieldProblem.java
start line: 42
end line: 44
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1770
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NullFieldProblem.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1771
unit: public Port getPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMissingFromIterationStrategyStackProblem.java
start line: 46
end line: 48
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1772
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMissingFromIterationStrategyStackProblem.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1773
unit: public WrongParentProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/WrongParentProblem.java
start line: 32
end line: 34
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1774
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/WrongParentProblem.java
start line: 37
end line: 39
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1775
unit: public String getFieldName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NegativeValueProblem.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1776
unit: public Integer getFieldValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NegativeValueProblem.java
start line: 52
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1777
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NegativeValueProblem.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1778
unit: public String getFieldName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/OutOfScopeValueProblem.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1779
unit: public Object getValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/OutOfScopeValueProblem.java
start line: 52
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1780
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/OutOfScopeValueProblem.java
start line: 57
end line: 59
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1781
unit: public String getFieldName()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NonAbsoluteURIProblem.java
start line: 47
end line: 49
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1782
unit: public URI getFieldValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/NonAbsoluteURIProblem.java
start line: 54
end line: 56
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1783
unit: public EmptyIterationStrategyTopNodeProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/EmptyIterationStrategyTopNodeProblem.java
start line: 33
end line: 35
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1784
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/EmptyIterationStrategyTopNodeProblem.java
start line: 38
end line: 40
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1785
unit: public Integer getDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/IncompatibleGranularDepthProblem.java
start line: 45
end line: 47
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1786
unit: public Integer getGranularDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/IncompatibleGranularDepthProblem.java
start line: 52
end line: 54
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1787
unit: public IterationStrategyNode getDuplicateNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMentionedTwiceProblem.java
start line: 43
end line: 45
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1788
unit: public String toString()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/report/PortMentionedTwiceProblem.java
start line: 48
end line: 50
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1789
unit: public void nullField()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1790
unit: public void wrongParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 124
end line: 126
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1791
unit: public HashSet getNegativeValueProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 136
end line: 138
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1792
unit: public HashSet getEmptyIterationStrategyTopNodeProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 143
end line: 145
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1793
unit: public HashSet getMismatchConfigurableTypeProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 150
end line: 152
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1794
unit: public HashSet getNonAbsoluteURIProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 157
end line: 159
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1795
unit: public HashSet getNullFieldProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 164
end line: 166
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1796
unit: public HashSet getOutOfScopeValueProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 171
end line: 173
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1797
unit: public HashSet getPortMentionedTwiceProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 178
end line: 180
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1798
unit: public HashSet getPortMissingFromIterationStrategyStackProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 185
end line: 187
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1799
unit: public HashSet getWrongParentProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 192
end line: 194
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1800
unit: public HashSet getIncompatibleGranularDepthProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/ReportCorrectnessValidationListener.java
start line: 199
end line: 201
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1801
unit: public void mismatchConfigurableType()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 51
end line: 53
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1802
unit: public void negativeValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 56
end line: 58
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1803
unit: public void nonAbsoluteURI()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 61
end line: 63
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1804
unit: public void outOfScopeValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1805
unit: public void portMentionedTwice()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 75
end line: 77
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1806
unit: public void portMissingFromIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 80
end line: 82
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1807
unit: public void incompatibleGranularDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 3

id: 1808
unit: public boolean detectedProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 94
end line: 96
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1809
unit: public ValidationException getException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 99
end line: 101
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1810
unit: public void unrecognizedIterationStrategyNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 89
end line: 91
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1811
unit: public boolean detectedProblems()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 102
end line: 104
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1812
unit: public ValidationException getException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 107
end line: 109
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1813
unit: public void depthResolution()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 88
end line: 90
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1814
unit: public void dotProductIterationMismatch()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 93
end line: 95
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1815
unit: public void emptyCrossProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 98
end line: 100
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1816
unit: public void emptyDotProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 103
end line: 105
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1817
unit: public void failedProcessorAdded()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 108
end line: 110
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1818
unit: public void incompleteWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 113
end line: 115
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1819
unit: public Set getIncompleteWorkflows()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 120
end line: 122
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1820
unit: public void missingIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 125
end line: 127
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1821
unit: public void missingMainIncomingLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 130
end line: 132
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1822
unit: public void passedProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 135
end line: 137
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1823
unit: public void unresolvedOutput()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 146
end line: 148
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1824
unit: public void unresolvedProcessorAdded()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 151
end line: 153
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1825
unit: public Set getDotProductIterationMismatches()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 158
end line: 160
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1826
unit: public Set getEmptyCrossProducts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 165
end line: 167
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1827
unit: public Set getEmptyDotProducts()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 172
end line: 174
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1828
unit: public Set getFailedProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 179
end line: 181
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1829
unit: public Set getMissingIterationStrategyStacks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 186
end line: 188
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1830
unit: public Set getMissingMainIncomingDataLinks()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 193
end line: 195
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1831
unit: public Set getUnrecognizedIterationStrategyNodes()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 200
end line: 202
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1832
unit: public Set getUnresolvedOutputs()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 207
end line: 209
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1833
unit: public Set getUnresolvedProcessors()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ReportStructuralValidationListener.java
start line: 214
end line: 216
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1834
unit: public IncompleteWorkflowProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/IncompleteWorkflowProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1835
unit: public EmptyCrossProductProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/EmptyCrossProductProblem.java
start line: 29
end line: 31
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1836
unit: public UnrecognizedIterationStrategyNodeProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/UnrecognizedIterationStrategyNodeProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1837
unit: public UnresolvedOutputProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/UnresolvedOutputProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1838
unit: public DotProductIterationMismatchProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/DotProductIterationMismatchProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1839
unit: public UnresolvedProcessorProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/UnresolvedProcessorProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1840
unit: public MissingIterationStrategyStackProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/MissingIterationStrategyStackProblem.java
start line: 29
end line: 31
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1841
unit: public FailedProcessorProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/FailedProcessorProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1842
unit: public EmptyDotProductProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/EmptyDotProductProblem.java
start line: 29
end line: 31
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1843
unit: public MissingMainIncomingDataLinkProblem()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/report/MissingMainIncomingDataLinkProblem.java
start line: 35
end line: 37
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1844
unit: public void setWorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 62
end line: 64
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1845
unit: public void setWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 66
end line: 68
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1846
unit: public WorkflowBundle getWorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 70
end line: 72
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1847
unit: public Workflow getWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 74
end line: 76
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1848
unit: public Profile getProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 78
end line: 80
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1849
unit: public void setDataLinkResolvedDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 82
end line: 84
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1850
unit: public Integer getDataLinkResolvedDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 86
end line: 88
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1851
unit: public boolean isMergedPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 134
end line: 136
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1852
unit: public void setPortResolvedDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 138
end line: 140
size: 3 LOC
McCabe index: 1
number of parameters: 2

id: 1853
unit: public Integer getPortResolvedDepth()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 142
end line: 144
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1854
unit: public void setProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 146
end line: 148
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1855
unit: public Processor getProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 150
end line: 152
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1856
unit: public void setEventListener()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 154
end line: 156
size: 3 LOC
McCabe index: 1
number of parameters: 1

id: 1857
unit: public StructuralValidationListener getEventListener()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/ValidatorState.java
start line: 158
end line: 160
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1858
unit: protected ValidatorState initialValue()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 60
end line: 62
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1859
unit: public ValidatorState getValidatorState()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 73
end line: 75
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1860
unit: private void clearWorkflowData()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/StructuralValidator.java
start line: 97
end line: 99
size: 3 LOC
McCabe index: 1
number of parameters: 0

id: 1861
unit: public ValidationReport()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/validator/ValidationReport.java
start line: 52
end line: 54
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1862
unit: protected PathMetadata()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/PathMetadata.java
start line: 58
end line: 59
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1863
unit: public Agent()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/manifest/Agent.java
start line: 33
end line: 34
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1864
unit: public BundleFileSystemProvider()
file: taverna-robundle/src/main/java/org/apache/taverna/robundle/fs/BundleFileSystemProvider.java
start line: 310
end line: 311
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1865
unit: public ToRobundle()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/tools/convert/ToRobundle.java
start line: 52
end line: 54
size: 2 LOC
McCabe index: 1
number of parameters: 3

id: 1866
unit: public CommandLineTool()
file: taverna-tavlang-tool/src/main/java/org/apache/taverna/tavlang/CommandLineTool.java
start line: 66
end line: 67
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1867
unit: public EncryptionData()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/EncryptionData.java
start line: 35
end line: 36
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1868
unit: public Algorithm()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/Algorithm.java
start line: 33
end line: 34
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1869
unit: public KeyDerivation()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/KeyDerivation.java
start line: 34
end line: 35
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1870
unit: public OdfFileEntry()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/manifest/OdfFileEntry.java
start line: 37
end line: 38
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1871
unit: public void setDocumentLocator()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1538
end line: 1539
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1872
unit: public void endDocument()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1554
end line: 1555
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1873
unit: public void endPrefixMapping()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1569
end line: 1570
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1874
unit: public void skippedEntity()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1674
end line: 1675
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1875
unit: public Resolver()
file: taverna-scufl2-ucfpackage/src/main/java/org/apache/taverna/scufl2/ucfpackage/impl/odfdom/pkg/OdfPackage.java
start line: 1685
end line: 1686
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1876
unit: public RDFXMLSerializer()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/RDFXMLSerializer.java
start line: 628
end line: 629
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1877
unit: public WorkflowParser()
file: taverna-scufl2-wfbundle/src/main/java/org/apache/taverna/scufl2/rdfxml/WorkflowParser.java
start line: 63
end line: 64
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1878
unit: private void parseAnnotations()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 198
end line: 200
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1879
unit: private void parseCoordination()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 207
end line: 209
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1880
unit: private void parseLink()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 216
end line: 218
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1881
unit: private void parseAlternates()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 321
end line: 323
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1882
unit: private void parseDispatchStack()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 352
end line: 354
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1883
unit: private void parseIterationStrategy()
file: taverna-scufl2-scufl/src/main/java/org/apache/taverna/scufl2/translator/scufl/ScuflParser.java
start line: 356
end line: 358
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1884
unit: public void parse()
file: taverna-scufl2-cwl/src/main/java/org/apache/taverna/scufl2/cwl/components/Reference.java
start line: 37
end line: 39
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1885
unit: public BlockingControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/BlockingControlLink.java
start line: 56
end line: 57
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1886
unit: public Workflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/core/Workflow.java
start line: 65
end line: 66
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1887
unit: public PortNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/PortNode.java
start line: 43
end line: 44
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1888
unit: public IterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/iterationstrategy/IterationStrategyStack.java
start line: 39
end line: 40
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1889
unit: public WriterException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/WriterException.java
start line: 41
end line: 42
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1890
unit: public ReaderException()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/io/ReaderException.java
start line: 39
end line: 40
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1891
unit: public Revision()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Revision.java
start line: 88
end line: 89
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1892
unit: public Annotation()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/annotation/Annotation.java
start line: 57
end line: 58
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1893
unit: public ProcessorOutputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorOutputPortBinding.java
start line: 52
end line: 53
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1894
unit: public ProcessorInputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/profiles/ProcessorInputPortBinding.java
start line: 51
end line: 52
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1895
unit: public OutputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/OutputActivityPort.java
start line: 42
end line: 43
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1896
unit: public InputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/api/port/InputActivityPort.java
start line: 42
end line: 43
size: 2 LOC
McCabe index: 1
number of parameters: 0

id: 1897
unit: public void visitActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 140
end line: 142
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1898
unit: public void visitActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 145
end line: 147
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1899
unit: public void visitConfigurable()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 195
end line: 197
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1900
unit: public void visitControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 223
end line: 225
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1901
unit: public void visitCrossProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 228
end line: 230
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1902
unit: public void visitDotProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 266
end line: 268
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1903
unit: public void visitInputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 271
end line: 273
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1904
unit: public void visitInputPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 276
end line: 278
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1905
unit: public void visitInputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 281
end line: 283
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1906
unit: public void visitInputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 286
end line: 288
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1907
unit: public void visitIterationStrategyNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 291
end line: 293
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1908
unit: public void visitIterationStrategyParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 296
end line: 298
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1909
unit: public void visitOutputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 360
end line: 362
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1910
unit: public void visitOutputPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 365
end line: 367
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1911
unit: public void visitOutputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 370
end line: 372
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1912
unit: public void visitOutputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 375
end line: 377
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1913
unit: public void visitPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 380
end line: 382
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1914
unit: public void visitProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 527
end line: 529
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1915
unit: public void visitProcessorPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 532
end line: 534
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1916
unit: public void visitReceiverPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 554
end line: 556
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1917
unit: public void visitSenderPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 572
end line: 574
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1918
unit: public void visitWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/CorrectnessVisitor.java
start line: 641
end line: 643
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1919
unit: public void visitActivity()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 72
end line: 73
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1920
unit: public void visitActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 76
end line: 77
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1921
unit: public void visitBlockingControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 80
end line: 81
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1922
unit: public void visitChild()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 84
end line: 85
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1923
unit: public void visitConfigurable()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 88
end line: 89
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1924
unit: public void visitConfiguration()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 92
end line: 93
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1925
unit: public void visitControlLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 96
end line: 97
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1926
unit: public void visitCrossProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 100
end line: 101
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1927
unit: public void visitDataLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 104
end line: 105
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1928
unit: public void visitDotProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 108
end line: 109
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1929
unit: public void visitInputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 112
end line: 113
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1930
unit: public void visitInputPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 116
end line: 117
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1931
unit: public void visitInputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 120
end line: 121
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1932
unit: public void visitInputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 124
end line: 125
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1933
unit: public void visitIterationStrategyNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 128
end line: 129
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1934
unit: public void visitIterationStrategyParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 132
end line: 133
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1935
unit: public void visitIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 136
end line: 137
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1936
unit: public void visitIterationStrategyTopNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 140
end line: 141
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1937
unit: public void visitNamed()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 144
end line: 145
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1938
unit: public void visitOutputActivityPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 148
end line: 149
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1939
unit: public void visitOutputPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 152
end line: 153
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1940
unit: public void visitOutputProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 156
end line: 157
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1941
unit: public void visitOutputWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 160
end line: 161
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1942
unit: public void visitPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 164
end line: 165
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1943
unit: public void visitPortNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 168
end line: 169
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1944
unit: public void visitPorted()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 172
end line: 173
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1945
unit: public void visitProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 176
end line: 177
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1946
unit: public void visitProcessorBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 180
end line: 181
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1947
unit: public void visitProcessorInputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 184
end line: 185
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1948
unit: public void visitProcessorOutputPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 188
end line: 189
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1949
unit: public void visitProcessorPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 192
end line: 193
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1950
unit: public void visitProcessorPortBinding()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 196
end line: 197
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1951
unit: public void visitProfile()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 200
end line: 201
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1952
unit: public void visitReceiverPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 204
end line: 205
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1953
unit: public void visitRoot()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 208
end line: 209
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1954
unit: public void visitSenderPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 212
end line: 213
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1955
unit: public void visitTyped()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 216
end line: 217
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1956
unit: public void visitWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 220
end line: 221
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1957
unit: public void visitWorkflowBundle()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 224
end line: 225
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1958
unit: public void visitWorkflowPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 228
end line: 229
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1959
unit: public void visitAbstractDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 232
end line: 233
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1960
unit: public void visitAbstractGranularDepthPort()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultDispatchingVisitor.java
start line: 236
end line: 237
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1961
unit: public void emptyIterationStrategyTopNode()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 47
end line: 48
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1962
unit: public void nullField()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 66
end line: 67
size: 2 LOC
McCabe index: 1
number of parameters: 2

id: 1963
unit: public void wrongParent()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/correctness/DefaultCorrectnessValidationListener.java
start line: 85
end line: 86
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1964
unit: public void dataLinkReceiver()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 45
end line: 46
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1965
unit: public void dataLinkSender()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 49
end line: 50
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1966
unit: public void depthResolution()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 53
end line: 54
size: 2 LOC
McCabe index: 1
number of parameters: 2

id: 1967
unit: public void dotProductIterationMismatch()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 57
end line: 58
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1968
unit: public void emptyCrossProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 61
end line: 62
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1969
unit: public void emptyDotProduct()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 65
end line: 66
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1970
unit: public void failedProcessorAdded()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 69
end line: 70
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1971
unit: public void incompleteWorkflow()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 73
end line: 74
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1972
unit: public void missingIterationStrategyStack()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 77
end line: 78
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1973
unit: public void missingMainIncomingLink()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 81
end line: 82
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1974
unit: public void passedProcessor()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 85
end line: 86
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1975
unit: public void unresolvedOutput()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 94
end line: 95
size: 2 LOC
McCabe index: 1
number of parameters: 1

id: 1976
unit: public void unresolvedProcessorAdded()
file: taverna-scufl2-api/src/main/java/org/apache/taverna/scufl2/validation/structural/DefaultStructuralValidationListener.java
start line: 98
end line: 99
size: 2 LOC
McCabe index: 1
number of parameters: 1