Path	Lines of Code
ADBench/ADBenchWebViewer/ADBenchWebViewer/Controllers/AzureBlobHelper.cs	78
ADBench/ADBenchWebViewer/ADBenchWebViewer/Controllers/IRunInfoProvider.cs	11
ADBench/ADBenchWebViewer/ADBenchWebViewer/Controllers/PlotsController.cs	23
ADBench/ADBenchWebViewer/ADBenchWebViewer/Models/PlotsInfo.cs	10
ADBench/ADBenchWebViewer/ADBenchWebViewer/Models/RunInfo.cs	12
ADBench/ADBenchWebViewer/ADBenchWebViewer/Program.cs	16
ADBench/ADBenchWebViewer/ADBenchWebViewer/Startup.cs	50
ADBench/ADBenchWebViewer/ADBenchWebViewer/Views/Plots/GetPlotly.cshtml	24
ADBench/ADBenchWebViewer/ADBenchWebViewer/Views/Plots/GetStatic.cshtml	26
ADBench/ADBenchWebViewer/ADBenchWebViewer/Views/Plots/Index.cshtml	24
ADBench/azure-devops-ci.ps1	36
ADBench/check_J.py	74
ADBench/compare-manvfinite.ps1	238
ADBench/plot_graphs.py	430
ADBench/run-all.ps1	624
ADBench/utils.py	76
Documents/biblio.bib	338
Documents/defines.tex	70
Documents/gOMS2e.cls	1036
JuliaManifest.toml	218
JuliaProject.toml	4
LICENSE.TXT	17
adobuilds/pr-linux-docker.yml	44
adobuilds/pr-win.yml	70
azure-devops.yml	21
cmake/Hunter/config.cmake	12
data/gmm/10k/times_03-Sep-2015.mat	66
data/gmm/10k/times_04-Sep-2015.mat	60
data/gmm/10k/times_19-Sep-2015.mat	68
data/gmm/10k/times_22-Sep-2015.mat	76
data/gmm/10k/times_24-Sep-2015.mat	75
data/gmm/10k/times_28-08-15.mat	71
data/gmm/1k/est/gmm_estimates_backup.mat	57
data/gmm/1k/times_03-Sep-2015.mat	89
data/gmm/1k/times_04-Sep-2015.mat	86
data/gmm/1k/times_11-08-15.mat	46
data/gmm/1k/times_13-08-15.mat	74
data/gmm/1k/times_19-Sep-2015.mat	78
data/gmm/1k/times_20-08-15.mat	72
data/gmm/1k/times_21-08-15.mat	81
data/gmm/1k/times_22-Sep-2015.mat	76
data/gmm/1k/times_24-Sep-2015.mat	71
data/gmm/1k/times_26-08-15.mat	78
data/gmm/2.5M/est/gmm_estimates_backup.mat	18
data/gmm/2.5M/times_02-09-15.mat	39
data/gmm/2.5M/times_03-Sep-2015.mat	40
data/gmm/2.5M/times_07-Sep-2015.mat	47
data/gmm/2.5M/times_18-Sep-2015.mat	35
data/gmm/2.5M/times_22-Sep-2015.mat	45
data/gmm/2.5M/times_24-Sep-2015.mat	44
data/gmm/gmm-data-gen.py	79
data/hand/complicated_big/times_22-Sep-2015.mat	22
data/hand/complicated_big/times_24-Sep-2015.mat	27
data/hand/complicated_small/times_16-Sep-2015.mat	16
data/hand/complicated_small/times_22-Sep-2015.mat	29
data/hand/complicated_small/times_24-Sep-2015.mat	28
data/hand/simple_big/times_16-Sep-2015.mat	16
data/hand/simple_big/times_22-Sep-2015.mat	34
data/hand/simple_big/times_24-Sep-2015.mat	35
data/hand/simple_small/times_15-Sep-2015.mat	14
data/hand/simple_small/times_16-Sep-2015.mat	21
data/hand/simple_small/times_22-Sep-2015.mat	30
data/hand/simple_small/times_24-Sep-2015.mat	32
data/lstm/gen_data.py	36
etc/HunterGate.cmake	467
src/cpp/modules/finite/FiniteBA.cpp	56
src/cpp/modules/finite/FiniteBA.h	18
src/cpp/modules/finite/FiniteGMM.cpp	39
src/cpp/modules/finite/FiniteGMM.h	15
src/cpp/modules/finite/FiniteHand.cpp	65
src/cpp/modules/finite/FiniteHand.h	17
src/cpp/modules/finite/FiniteLSTM.cpp	40
src/cpp/modules/finite/FiniteLSTM.h	18
src/cpp/modules/finite/finite.h	78
src/cpp/modules/finiteEigen/FiniteEigenHand.cpp	67
src/cpp/modules/finiteEigen/FiniteEigenHand.h	18
src/cpp/modules/manual/ManualBA.cpp	51
src/cpp/modules/manual/ManualBA.h	16
src/cpp/modules/manual/ManualGMM.cpp	32
src/cpp/modules/manual/ManualGMM.h	14
src/cpp/modules/manual/ManualHand.cpp	49
src/cpp/modules/manual/ManualHand.h	14
src/cpp/modules/manual/ManualLSTM.cpp	32
src/cpp/modules/manual/ManualLSTM.h	16
src/cpp/modules/manual/ba_d.cpp	184
src/cpp/modules/manual/ba_d.h	10
src/cpp/modules/manual/gmm_d.cpp	148
src/cpp/modules/manual/gmm_d.h	10
src/cpp/modules/manual/hand_d.cpp	487
src/cpp/modules/manual/hand_d.h	80
src/cpp/modules/manual/lstm_d.cpp	435
src/cpp/modules/manual/lstm_d.h	6
src/cpp/modules/manual/lstm_d_structures.h	225
src/cpp/modules/manualEigen/ManualEigenBA.cpp	51
src/cpp/modules/manualEigen/ManualEigenBA.h	16
src/cpp/modules/manualEigen/ManualEigenGMM.cpp	33
src/cpp/modules/manualEigen/ManualEigenGMM.h	14
src/cpp/modules/manualEigen/ManualEigenHand.cpp	51
src/cpp/modules/manualEigen/ManualEigenHand.h	16
src/cpp/modules/manualEigen/ManualEigenLSTM.cpp	32
src/cpp/modules/manualEigen/ManualEigenLSTM.h	16
src/cpp/modules/manualEigen/ba_d.cpp	156
src/cpp/modules/manualEigen/ba_d.h	10
src/cpp/modules/manualEigen/gmm_d.cpp	119
src/cpp/modules/manualEigen/gmm_d.h	29
src/cpp/modules/manualEigen/gmm_scalar_d.cpp	89
src/cpp/modules/manualEigen/gmm_scalar_d.h	10
src/cpp/modules/manualEigen/hand_eigen_d.cpp	428
src/cpp/modules/manualEigen/hand_eigen_d.h	91
src/cpp/modules/manualEigen/lstm_eigen_d.cpp	263
src/cpp/modules/manualEigen/lstm_eigen_d.h	6
src/cpp/modules/manualEigen/lstm_eigen_d_structures.h	209
src/cpp/modules/manualEigenVector/ManualEigenVectorGMM.cpp	60
src/cpp/modules/manualEigenVector/ManualEigenVectorGMM.h	14
src/cpp/modules/manualEigenVector/gmm_eigen_vector.h	148
src/cpp/modules/manualEigenVector/gmm_vector_d.cpp	119
src/cpp/modules/manualEigenVector/gmm_vector_d.h	10
src/cpp/modules/manualEigenVector/memory_size.cpp	34
src/cpp/modules/manualEigenVector/memory_size.h	2
src/cpp/modules/tapenade/TapenadeBA.cpp	106
src/cpp/modules/tapenade/TapenadeBA.h	25
src/cpp/modules/tapenade/TapenadeGMM.cpp	61
src/cpp/modules/tapenade/TapenadeGMM.h	19
src/cpp/modules/tapenade/TapenadeHand.cpp	277
src/cpp/modules/tapenade/TapenadeHand.h	47
src/cpp/modules/tapenade/TapenadeLSTM.cpp	57
src/cpp/modules/tapenade/TapenadeLSTM.h	19
src/cpp/modules/tapenade/ba/ba.c	121
src/cpp/modules/tapenade/ba/ba.h	23
src/cpp/modules/tapenade/ba/ba_b.c	256
src/cpp/modules/tapenade/ba/ba_b.h	27
src/cpp/modules/tapenade/ba/ba_b_tapenade_generated.c	250
src/cpp/modules/tapenade/gmm/gmm.c	163
src/cpp/modules/tapenade/gmm/gmm.h	21
src/cpp/modules/tapenade/gmm/gmm_b.c	343
src/cpp/modules/tapenade/gmm/gmm_b.h	26
src/cpp/modules/tapenade/gmm/gmm_b_tapenade_generated.c	340
src/cpp/modules/tapenade/hand/hand.c	459
src/cpp/modules/tapenade/hand/hand.h	49
src/cpp/modules/tapenade/hand/hand_d.c	539
src/cpp/modules/tapenade/hand/hand_d.h	43
src/cpp/modules/tapenade/hand/hand_d_tapenade_generated.c	532
src/cpp/modules/tapenade/lstm/lstm.c	113
src/cpp/modules/tapenade/lstm/lstm.h	19
src/cpp/modules/tapenade/lstm/lstm_b.c	270
src/cpp/modules/tapenade/lstm/lstm_b.h	23
src/cpp/modules/tapenade/lstm/lstm_b_tapenade_generated.c	268
src/cpp/modules/tapenade/utils/adBuffer.c	551
src/cpp/modules/tapenade/utils/adBuffer.h	54
src/cpp/modules/tapenade/utils/adStack.c	384
src/cpp/modules/tapenade/utils/adStack.h	30
src/cpp/runner/BABenchmark.cpp	22
src/cpp/runner/BABenchmark.h	9
src/cpp/runner/Benchmark.h	103
src/cpp/runner/Filepaths.cpp	25
src/cpp/runner/Filepaths.h	4
src/cpp/runner/GMMBenchmark.cpp	21
src/cpp/runner/GMMBenchmark.h	9
src/cpp/runner/HandBenchmark.cpp	26
src/cpp/runner/HandBenchmark.h	10
src/cpp/runner/LSTMBenchmark.cpp	21
src/cpp/runner/LSTMBenchmark.h	12
src/cpp/runner/ModuleLoader.cpp	88
src/cpp/runner/ModuleLoader.h	30
src/cpp/runner/OutputSave.cpp	75
src/cpp/runner/OutputSave.h	15
src/cpp/runner/main.cpp	63
src/cpp/shared/BAData.h	14
src/cpp/shared/GMMData.h	15
src/cpp/shared/HandData.h	17
src/cpp/shared/HandEigenData.h	43
src/cpp/shared/ITest.h	26
src/cpp/shared/LSTMData.h	16
src/cpp/shared/ba.h	136
src/cpp/shared/ba_eigen.h	159
src/cpp/shared/defs.h	24
src/cpp/shared/gmm.h	209
src/cpp/shared/gmm_eigen.h	57
src/cpp/shared/gmm_eigen_scalar.h	122
src/cpp/shared/gmm_eigen_vector.h	109
src/cpp/shared/hand_eigen.h	196
src/cpp/shared/hand_eigen_model.h	25
src/cpp/shared/hand_light_matrix.h	211
src/cpp/shared/light_matrix.h	195
src/cpp/shared/lstm.h	171
src/cpp/shared/lstm_eigen.h	150
src/cpp/shared/lstm_eigen_types.h	17
src/cpp/shared/matrix.h	141
src/cpp/shared/utils.cpp	568
src/cpp/shared/utils.h	106
src/cpp/utils/finitePartialGmm/main.cpp	63
src/dotnet/modules/DiffSharpModule/DiffSharpModule.fsproj	26
src/dotnet/modules/DiffSharpModule/ba.fs	150
src/dotnet/modules/DiffSharpModule/gmm.fs	78
src/dotnet/modules/DiffSharpModule/hand.fs	149
src/dotnet/modules/DiffSharpModule/lstm.fs	68
src/dotnet/modules/DiffSharpModule/utils.fs	24
src/dotnet/runner/Benchmarks/BABenchmark.cs	26
src/dotnet/runner/Benchmarks/Benchmark.cs	98
src/dotnet/runner/Benchmarks/GMMBenchmark.cs	15
src/dotnet/runner/Benchmarks/HandBenchmark.cs	15
src/dotnet/runner/Benchmarks/LSTMBenchmark.cs	15
src/dotnet/runner/Data/BAData.cs	89
src/dotnet/runner/Data/DataLoader.cs	238
src/dotnet/runner/Data/GMMData.cs	32
src/dotnet/runner/Data/HandData.cs	35
src/dotnet/runner/Data/LSTMData.cs	22
src/dotnet/runner/ITest.cs	14
src/dotnet/runner/ModuleLoader.cs	67
src/dotnet/runner/Program.cs	65
src/dotnet/runner/SavingOutput.cs	80
src/dotnet/utils/JacobianComparisonLib/JacobianComparison.cs	298
src/julia/modules/Zygote/ZygoteBA.jl	123
src/julia/modules/Zygote/ZygoteGMM.jl	161
src/julia/modules/Zygote/ZygoteHAND.jl	186
src/julia/modules/Zygote/ZygoteLSTM.jl	88
src/julia/runner/Benchmark.jl	73
src/julia/runner/DataUtils.jl	92
src/julia/runner/Runner.jl	60
src/julia/runner/TestLoader.jl	34
src/julia/runner/load.jl	3
src/julia/shared/ADPerfTest.jl	25
src/julia/shared/BAData.jl	114
src/julia/shared/GMMData.jl	73
src/julia/shared/HandData.jl	90
src/julia/shared/LSTMData.jl	31
src/julia/shared/load.jl	3
src/python/modules/PyTorch/PyTorchBA.py	71
src/python/modules/PyTorch/PyTorchGMM.py	35
src/python/modules/PyTorch/PyTorchHand.py	93
src/python/modules/PyTorch/PyTorchLSTM.py	33
src/python/modules/PyTorch/__init__.py	1
src/python/modules/PyTorch/ba_objective.py	28
src/python/modules/PyTorch/gmm_objective.py	57
src/python/modules/PyTorch/hand_objective.py	172
src/python/modules/PyTorch/lstm_objective.py	34
src/python/modules/PyTorch/utils.py	53
src/python/modules/Tensorflow/TensorflowBA.py	84
src/python/modules/Tensorflow/TensorflowGMM.py	52
src/python/modules/Tensorflow/TensorflowHand.py	93
src/python/modules/Tensorflow/TensorflowLSTM.py	44
src/python/modules/Tensorflow/__init__.py	1
src/python/modules/Tensorflow/lstm_objective.py	44
src/python/modules/TensorflowCommon/__init__.py	1
src/python/modules/TensorflowCommon/ba_objective.py	32
src/python/modules/TensorflowCommon/gmm_objective.py	58
src/python/modules/TensorflowCommon/hand_objective.py	173
src/python/modules/TensorflowCommon/utils.py	19
src/python/modules/TensorflowGraph/TensorflowGraphBA.py	144
src/python/modules/TensorflowGraph/TensorflowGraphGMM.py	96
src/python/modules/TensorflowGraph/TensorflowGraphHand.py	114
src/python/modules/TensorflowGraph/TensorflowGraphLSTM.py	81
src/python/modules/TensorflowGraph/lstm_objective.py	51
src/python/modules/TorchScript/TorchScriptGMM.py	41
src/python/modules/TorchScript/__init__.py	1
src/python/modules/TorchScript/gmm_objective.py	79
src/python/modules/TorchScript/torch_multigammaln.py	13
src/python/modules/__init__.py	1
src/python/runner/Benchmark.py	60
src/python/runner/Filepaths.py	19
src/python/runner/ModuleLoader.py	17
src/python/runner/__init__.py	1
src/python/runner/main.py	60
src/python/shared/BAData.py	32
src/python/shared/BASparseMat.py	107
src/python/shared/GMMData.py	33
src/python/shared/HandData.py	59
src/python/shared/ITest.py	14
src/python/shared/LSTMData.py	28
src/python/shared/__init__.py	1
src/python/shared/defs.py	13
src/python/shared/input_utils.py	207
src/python/shared/output_utils.py	64
submodules/adimat-0.6.2-5288/ADiMat_startup.m	15
submodules/adimat-0.6.2-5288/adjointclasses/default/a_zeros.m	26
submodules/adimat-0.6.2-5288/adjointclasses/default/a_zeros1.m	21
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submodules/adimat-0.6.2-5288/vector_directderivs/getdd.m	23
submodules/adimat-0.6.2-5288/vector_directderivs/option.m	43
toolchain-gcc.cmake	18
toolchain.cmake	18
tools/ADOLC/main.cpp	733
tools/ADiMat/ADiMat_ba.m	64
tools/ADiMat/ADiMat_gmm.m	57
tools/ADiMat/ADiMat_hand_complicated.m	58
tools/ADiMat/ADiMat_hand_simple.m	59
tools/ADiMat/a_ba_compute_reproj_err.m	386
tools/ADiMat/a_ba_objective.m	668
tools/ADiMat/a_compute_w_err.m	56
tools/ADiMat/a_gmm_objective.m	586
tools/ADiMat/a_gmm_objective_vector_repmat.m	547
tools/ADiMat/adimat_compute_sparse_J.m	27
tools/ADiMat/adimat_run_ba.m	44
tools/ADiMat/adimat_run_gmm.m	32
tools/ADiMat/adimat_run_hand.m	26
tools/ADiMat/adimat_translate_if_new.m	27
tools/ADiMat/adimatba.mat	4
tools/ADiMat/d_ba_objective.m	192
tools/ADiMat/d_gmm_objective.m	191
tools/ADiMat/d_hand_objective.m	393
tools/ADiMat/d_hand_objective_complicated.m	413
tools/ADiMat/demo_adimat.m	139
tools/Adept/hand_vxl.h	191
tools/Adept/main.cpp	345
tools/Adept/utils_vxl.h	201
tools/Autograd/Autograd_ba.py	100
tools/Autograd/Autograd_gmm_full.py	31
tools/Autograd/Autograd_gmm_split.py	108
tools/Autograd/gmm_objective.py	63
tools/Ceres/ba.h	139
tools/Ceres/gmm.h	173
tools/Ceres/hand_eigen.h	169
tools/Ceres/hand_light_matrix.h	186
tools/Ceres/main.cpp	303
tools/Julia/ba_F.jl	164
tools/Julia/common.jl	104
tools/Julia/common_io.jl	19
tools/Julia/gmm_F.jl	60
tools/Julia/gmm_F_vector.jl	82
tools/Julia/gmm_R.jl	137
tools/Julia/hand_F.jl	220
tools/MuPad/MuPad_ba.m	32
tools/MuPad/MuPad_gmm.m	31
tools/MuPad/MuPad_hand.m	38
tools/MuPad/example_gmm_objective.m	133
tools/MuPad/example_gmm_objective_mex_d2_K3.cxx	177
tools/MuPad/example_gmm_objective_mex_d2_K5.cxx	259
tools/MuPad/mupad_ba_compute_reproj_err.m	37
tools/MuPad/mupad_ba_compute_reproj_err_mex.cxx	385
tools/MuPad/mupad_ba_compute_weight_err.m	26
tools/MuPad/mupad_ba_compute_weight_err_mex.cxx	42
tools/MuPad/mupad_ba_objective.m	33
tools/MuPad/mupad_gmm_objective.m	23
tools/MuPad/mupad_hand_objective.m	68
tools/Theano/Theano_ba.py	116
tools/Theano/Theano_experimenting.py	172
tools/Theano/Theano_gmm.py	146
tools/Theano/Theano_hand_complicated.py	213
tools/Theano/Theano_hand_simple.py	189
tools/Theano/Theano_hand_simple_Rop.py	192
tools/Theano/Theano_vector.py	144
tools/matlab-common/ba_compute_reproj_err.m	25
tools/matlab-common/ba_objective.m	44
tools/matlab-common/compute_w_err.m	5
tools/matlab-common/control_script_ba.m	193
tools/matlab-common/control_script_gmm.m	281
tools/matlab-common/control_script_hand.m	203
tools/matlab-common/create_nonzero_pattern_ba.m	26
tools/matlab-common/create_nonzero_pattern_hand.m	24
tools/matlab-common/determine_n_runs.m	14
tools/matlab-common/finite_diff_example.m	39
tools/matlab-common/generate_ba_instance_params.m	47
tools/matlab-common/generate_colors.m	17
tools/matlab-common/generate_random_ba_instance.m	58
tools/matlab-common/generate_symbols.m	17
tools/matlab-common/get_skinned_vertex_positions.m	29
tools/matlab-common/get_tools_ba.m	134
tools/matlab-common/get_tools_gmm.m	179
tools/matlab-common/get_tools_hand.m	110
tools/matlab-common/get_tools_hand_complicated.m	96
tools/matlab-common/gmm_objective.m	32
tools/matlab-common/gmm_objective_vector_repmat.m	30
tools/matlab-common/hand_objective.m	12
tools/matlab-common/hand_objective_complicated.m	17
tools/matlab-common/is_up_to_date.m	12
tools/matlab-common/load_J.m	9
tools/matlab-common/load_ba_instance.m	46
tools/matlab-common/load_gmm_instance.m	43
tools/matlab-common/load_hand_instance.m	50
tools/matlab-common/logsumexp.m	10
tools/matlab-common/logsumexp_repmat.m	11
tools/matlab-common/params_ba.mat	5
tools/matlab-common/params_gmm.mat	2
tools/matlab-common/params_hand.mat	1
tools/matlab-common/params_mupad.mat	5
tools/matlab-common/plot_log_runtimes.m	32
tools/matlab-common/read_times.m	45
tools/matlab-common/refresh_files.m	25
tools/matlab-common/save_ba_instance.m	57
tools/matlab-common/save_gmm_instance.m	66
tools/matlab-common/to_pose_params.m	30
tools/matlab-common/write_script.m	122
tools/python_common/ba_io.py	28
tools/python_common/gmm_io.py	32
tools/python_common/hand_io.py	81
tools/python_common/lstm_io.py	31
tools/python_common/utils.py	19
travis.yml	9
usr/awf/Julia/GMM.jl	94
usr/awf/Julia/IPynbToJl.jl	24
usr/awf/Julia/LowerTriangular.jl	22
usr/awf/Julia/MatVec.jl	6
usr/awf/Julia/awfrdiff.jl	317
usr/awf/Julia/gmm3.jl	168
usr/awf/Julia/logsumexp.jl	18