file 1	file 2	# same commits	# commits file 1	# commits file 2
api_flask_redis/api_core/animal_detection_api/api_frontend.py	api_flask_redis/api_core/animal_detection_api/api_backend.py	15	26	16
api_flask_redis/api_core/animal_detection_api/config.py	api_flask_redis/api_core/animal_detection_api/api_frontend.py	11	13	26
api_flask_redis/api_core/animal_detection_api/config.py	api_flask_redis/api_core/animal_detection_api/api_backend.py	10	13	16
api/batch_processing/api_core/server_api_config.py	api/batch_processing/api_core/server.py	10	10	13
api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	api/batch_processing/data_preparation/manage_api_submission.py	8	39	132
api/batch_processing/api_core/server_orchestration.py	api/batch_processing/api_core/server.py	8	8	13
api/batch_processing/api_core/server_orchestration.py	api/batch_processing/api_core/server_api_config.py	8	8	10
visualization/visualize_detector_output.py	detection/process_video.py	6	108	24
detection/video_utils.py	detection/process_video.py	5	15	24
api/batch_processing/data_preparation/manage_api_submission.py	detection/video_utils.py	5	132	15
classification/train_classifier.py	classification/run_classifier.py	5	19	10
visualization/visualize_incoming_annotations.py	visualization/visualization_utils.py	5	51	237
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/api_core/server.py	5	5	13
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/api_core/server_api_config.py	5	5	10
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/server.py	5	5	13
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/server_api_config.py	5	5	10
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server.py	5	6	13
research/umn-pr-analysis.py	detection/process_video.py	4	13	24
data_management/megadb/run_query.py	data_management/megadb/megadb_utils.py	4	5	28
detection/run_tf_detector.py	detection/run_tf_detector_batch.py	4	154	189
api/batch_processing/postprocessing/subset_json_detector_output.py	api/batch_processing/data_preparation/manage_api_submission.py	4	83	132
classification/crop_detections.py	classification/run_classifier.py	4	13	10
classification/crop_detections.py	classification/train_classifier.py	4	13	19
classification/aggregate_classifier_probs.py	classification/run_classifier.py	4	8	10
classification/aggregate_classifier_probs.py	classification/train_classifier.py	4	8	19
classification/aggregate_classifier_probs.py	classification/crop_detections.py	4	8	13
classification/analyze_failed_images.py	classification/run_classifier.py	4	11	10
classification/analyze_failed_images.py	classification/train_classifier.py	4	11	19
classification/analyze_failed_images.py	classification/crop_detections.py	4	11	13
classification/analyze_failed_images.py	classification/aggregate_classifier_probs.py	4	11	8
classification/cache_batchapi_outputs.py	classification/run_classifier.py	4	9	10
classification/cache_batchapi_outputs.py	classification/train_classifier.py	4	9	19
classification/cache_batchapi_outputs.py	classification/crop_detections.py	4	9	13
classification/cache_batchapi_outputs.py	classification/aggregate_classifier_probs.py	4	9	8
classification/cache_batchapi_outputs.py	classification/analyze_failed_images.py	4	9	11
classification/create_classification_dataset.py	classification/run_classifier.py	4	23	10
classification/create_classification_dataset.py	classification/train_classifier.py	4	23	19
classification/create_classification_dataset.py	classification/crop_detections.py	4	23	13
classification/create_classification_dataset.py	classification/aggregate_classifier_probs.py	4	23	8
classification/create_classification_dataset.py	classification/analyze_failed_images.py	4	23	11
classification/create_classification_dataset.py	classification/cache_batchapi_outputs.py	4	23	9
classification/csv_to_json.py	classification/run_classifier.py	4	7	10
classification/csv_to_json.py	classification/train_classifier.py	4	7	19
classification/csv_to_json.py	classification/crop_detections.py	4	7	13
classification/csv_to_json.py	classification/aggregate_classifier_probs.py	4	7	8
classification/csv_to_json.py	classification/analyze_failed_images.py	4	7	11
classification/csv_to_json.py	classification/cache_batchapi_outputs.py	4	7	9
classification/csv_to_json.py	classification/create_classification_dataset.py	4	7	23
classification/detect_and_crop.py	classification/run_classifier.py	4	17	10
classification/detect_and_crop.py	classification/train_classifier.py	4	17	19
classification/detect_and_crop.py	classification/crop_detections.py	4	17	13
classification/detect_and_crop.py	classification/aggregate_classifier_probs.py	4	17	8
classification/detect_and_crop.py	classification/analyze_failed_images.py	4	17	11
classification/detect_and_crop.py	classification/cache_batchapi_outputs.py	4	17	9
classification/detect_and_crop.py	classification/create_classification_dataset.py	4	17	23
classification/detect_and_crop.py	classification/csv_to_json.py	4	17	7
classification/evaluate_model.py	classification/run_classifier.py	4	18	10
classification/evaluate_model.py	classification/train_classifier.py	4	18	19
classification/evaluate_model.py	classification/crop_detections.py	4	18	13
classification/evaluate_model.py	classification/aggregate_classifier_probs.py	4	18	8
classification/evaluate_model.py	classification/analyze_failed_images.py	4	18	11
classification/evaluate_model.py	classification/cache_batchapi_outputs.py	4	18	9
classification/evaluate_model.py	classification/create_classification_dataset.py	4	18	23
classification/evaluate_model.py	classification/csv_to_json.py	4	18	7
classification/evaluate_model.py	classification/detect_and_crop.py	4	18	17
classification/identify_mislabeled_candidates.py	classification/run_classifier.py	4	10	10
classification/identify_mislabeled_candidates.py	classification/train_classifier.py	4	10	19
classification/identify_mislabeled_candidates.py	classification/crop_detections.py	4	10	13
classification/identify_mislabeled_candidates.py	classification/aggregate_classifier_probs.py	4	10	8
classification/identify_mislabeled_candidates.py	classification/analyze_failed_images.py	4	10	11
classification/identify_mislabeled_candidates.py	classification/cache_batchapi_outputs.py	4	10	9
classification/identify_mislabeled_candidates.py	classification/create_classification_dataset.py	4	10	23
classification/identify_mislabeled_candidates.py	classification/csv_to_json.py	4	10	7
classification/identify_mislabeled_candidates.py	classification/detect_and_crop.py	4	10	17
classification/identify_mislabeled_candidates.py	classification/evaluate_model.py	4	10	18
classification/json_validator.py	classification/run_classifier.py	4	17	10
classification/json_validator.py	classification/train_classifier.py	4	17	19
classification/json_validator.py	classification/crop_detections.py	4	17	13
classification/json_validator.py	classification/aggregate_classifier_probs.py	4	17	8
classification/json_validator.py	classification/analyze_failed_images.py	4	17	11
classification/json_validator.py	classification/cache_batchapi_outputs.py	4	17	9
classification/json_validator.py	classification/create_classification_dataset.py	4	17	23
classification/json_validator.py	classification/csv_to_json.py	4	17	7
classification/json_validator.py	classification/detect_and_crop.py	4	17	17
classification/json_validator.py	classification/evaluate_model.py	4	17	18
classification/json_validator.py	classification/identify_mislabeled_candidates.py	4	17	10
classification/map_classification_categories.py	classification/run_classifier.py	4	8	10
classification/map_classification_categories.py	classification/train_classifier.py	4	8	19
classification/map_classification_categories.py	classification/crop_detections.py	4	8	13
classification/map_classification_categories.py	classification/aggregate_classifier_probs.py	4	8	8
classification/map_classification_categories.py	classification/analyze_failed_images.py	4	8	11
classification/map_classification_categories.py	classification/cache_batchapi_outputs.py	4	8	9
classification/map_classification_categories.py	classification/create_classification_dataset.py	4	8	23
classification/map_classification_categories.py	classification/csv_to_json.py	4	8	7
classification/map_classification_categories.py	classification/detect_and_crop.py	4	8	17
classification/map_classification_categories.py	classification/evaluate_model.py	4	8	18
classification/map_classification_categories.py	classification/identify_mislabeled_candidates.py	4	8	10
classification/map_classification_categories.py	classification/json_validator.py	4	8	17
classification/merge_classification_detection_output.py	classification/run_classifier.py	4	17	10
classification/merge_classification_detection_output.py	classification/train_classifier.py	4	17	19
classification/merge_classification_detection_output.py	classification/crop_detections.py	4	17	13
classification/merge_classification_detection_output.py	classification/aggregate_classifier_probs.py	4	17	8
classification/merge_classification_detection_output.py	classification/analyze_failed_images.py	4	17	11
classification/merge_classification_detection_output.py	classification/cache_batchapi_outputs.py	4	17	9
classification/merge_classification_detection_output.py	classification/create_classification_dataset.py	4	17	23
classification/merge_classification_detection_output.py	classification/csv_to_json.py	4	17	7
classification/merge_classification_detection_output.py	classification/detect_and_crop.py	4	17	17
classification/merge_classification_detection_output.py	classification/evaluate_model.py	4	17	18
classification/merge_classification_detection_output.py	classification/identify_mislabeled_candidates.py	4	17	10
classification/merge_classification_detection_output.py	classification/json_validator.py	4	17	17
classification/merge_classification_detection_output.py	classification/map_classification_categories.py	4	17	8
classification/train_classifier_tf.py	classification/run_classifier.py	4	12	10
classification/train_classifier_tf.py	classification/train_classifier.py	4	12	19
classification/train_classifier_tf.py	classification/crop_detections.py	4	12	13
classification/train_classifier_tf.py	classification/aggregate_classifier_probs.py	4	12	8
classification/train_classifier_tf.py	classification/analyze_failed_images.py	4	12	11
classification/train_classifier_tf.py	classification/cache_batchapi_outputs.py	4	12	9
classification/train_classifier_tf.py	classification/create_classification_dataset.py	4	12	23
classification/train_classifier_tf.py	classification/csv_to_json.py	4	12	7
classification/train_classifier_tf.py	classification/detect_and_crop.py	4	12	17
classification/train_classifier_tf.py	classification/evaluate_model.py	4	12	18
classification/train_classifier_tf.py	classification/identify_mislabeled_candidates.py	4	12	10
classification/train_classifier_tf.py	classification/json_validator.py	4	12	17
classification/train_classifier_tf.py	classification/map_classification_categories.py	4	12	8
classification/train_classifier_tf.py	classification/merge_classification_detection_output.py	4	12	17
classification/train_utils.py	classification/run_classifier.py	4	16	10
classification/train_utils.py	classification/train_classifier.py	4	16	19
classification/train_utils.py	classification/crop_detections.py	4	16	13
classification/train_utils.py	classification/aggregate_classifier_probs.py	4	16	8
classification/train_utils.py	classification/analyze_failed_images.py	4	16	11
classification/train_utils.py	classification/cache_batchapi_outputs.py	4	16	9
classification/train_utils.py	classification/create_classification_dataset.py	4	16	23
classification/train_utils.py	classification/csv_to_json.py	4	16	7
classification/train_utils.py	classification/detect_and_crop.py	4	16	17
classification/train_utils.py	classification/evaluate_model.py	4	16	18
classification/train_utils.py	classification/identify_mislabeled_candidates.py	4	16	10
classification/train_utils.py	classification/json_validator.py	4	16	17
classification/train_utils.py	classification/map_classification_categories.py	4	16	8
classification/train_utils.py	classification/merge_classification_detection_output.py	4	16	17
classification/train_utils.py	classification/train_classifier_tf.py	4	16	12
api/batch_processing/api_core/server_app_config.py	api/batch_processing/api_core/server.py	4	4	13
api/batch_processing/api_core/server_app_config.py	api/batch_processing/api_core/server_api_config.py	4	4	10
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/api_core/server_orchestration.py	4	5	8
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/server_orchestration.py	4	5	8
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server_api_config.py	4	6	10
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server_job_status_table.py	4	6	5
detection/run_tf_detector_batch.py	detection/process_video.py	3	189	24
visualization/visualize_detector_output.py	detection/video_utils.py	3	108	15
visualization/visualization_utils.py	visualization/visualize_db.py	3	237	72
visualization/visualization_utils.py	visualization/visualize_detector_output.py	3	237	108
api/batch_processing/data_preparation/manage_api_submission.py	visualization/visualization_utils.py	3	132	237
data_management/importers/idaho-camera-traps.py	visualization/visualize_db.py	3	9	72
api/batch_processing/postprocessing/postprocess_batch_results.py	visualization/visualization_utils.py	3	178	237
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	3	62	39
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/postprocess_batch_results.py	3	62	178
data_management/importers/noaa_seals_2019.py	visualization/visualization_utils.py	3	3	237
api/batch_processing/api_core/server_app_config.py	api/batch_processing/api_core/server_orchestration.py	3	4	8
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/api_core/server_app_config.py	3	5	4
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/data_preparation/manage_api_submission.py	3	73	132
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server_orchestration.py	3	6	8
detection/run_tf_detector_batch.py	data_management/importers/missouri_to_json.py	2	189	37
detection/run_tf_detector_batch.py	api/batch_processing/data_preparation/manage_local_batch.py	2	189	5
data_management/megadb/megadb_utils.py	data_management/megadb/download_images.py	2	28	11
data_management/megadb/run_query.py	ct_utils.py	2	5	43
data_management/megadb/run_query.py	data_management/megadb/download_images.py	2	5	11
data_management/megadb/split_images.py	data_management/megadb/download_images.py	2	8	11
data_management/megadb/split_images.py	data_management/megadb/megadb_utils.py	2	8	28
data_management/megadb/split_images.py	data_management/megadb/run_query.py	2	8	5
data_management/tfrecords/utils/create_tfrecords.py	data_management/tfrecords/make_tfrecords_megadb.py	2	20	5
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	ct_utils.py	2	2	43
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/megadb/run_query.py	2	2	5
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	ct_utils.py	2	2	43
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/megadb/run_query.py	2	2	5
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	2	2	2
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	ct_utils.py	2	2	43
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/megadb/run_query.py	2	2	5
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	2	2	2
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	2	2	2
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	ct_utils.py	2	2	43
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/megadb/run_query.py	2	2	5
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	2	2	2
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	2	2	2
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	2	2	2
detection/detector_training/model_main_tf2.py	data_management/tfrecords/make_tfrecords_megadb.py	2	2	5
detection/detector_training/model_main_tf2.py	data_management/tfrecords/utils/create_tfrecords.py	2	2	20
visualization/visualize_db.py	ct_utils.py	2	72	43
visualization/visualize_db.py	data_management/megadb/run_query.py	2	72	5
visualization/visualize_db.py	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	2	72	2
visualization/visualize_db.py	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	2	72	2
visualization/visualize_db.py	detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	2	72	2
visualization/visualize_db.py	detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	2	72	2
visualization/visualization_utils.py	data_management/megadb/megadb_utils.py	2	237	28
visualization/visualization_utils.py	data_management/megadb/run_query.py	2	237	5
visualization/visualization_utils.py	detection/process_video.py	2	237	24
api/batch_processing/data_preparation/manage_api_submission.py	detection/run_tf_detector_batch.py	2	132	189
api/batch_processing/data_preparation/manage_api_submission.py	visualization/visualize_detector_output.py	2	132	108
classification/run_classifier.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	10	39
classification/run_classifier.py	visualization/visualization_utils.py	2	10	237
classification/train_classifier.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	19	39
classification/train_classifier.py	visualization/visualization_utils.py	2	19	237
environment-detector.yml	detection/run_tf_detector_batch.py	2	25	189
environment-detector.yml	detection/run_tf_detector.py	2	25	154
data_management/importers/snapshot_safari_importer.py	api/batch_processing/data_preparation/manage_api_submission.py	2	17	132
data_management/importers/snapshot_safari_importer.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	17	39
visualization/plot_utils.py	research/umn-pr-analysis.py	2	12	13
api/batch_processing/postprocessing/separate_detections_into_folders.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	31	39
api/batch_processing/postprocessing/repeat_detection_elimination/remove_repeat_detections.py	api/batch_processing/postprocessing/repeat_detection_elimination/find_repeat_detections.py	2	11	11
api/batch_processing/postprocessing/subset_json_detector_output.py	visualization/visualize_detector_output.py	2	83	108
api/batch_processing/postprocessing/subset_json_detector_output.py	visualization/visualization_utils.py	2	83	237
api/batch_processing/postprocessing/subset_json_detector_output.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	83	39
api/batch_processing/postprocessing/combine_api_outputs.py	api/batch_processing/data_preparation/manage_api_submission.py	2	27	132
data_management/importers/idaho-camera-traps.py	api/batch_processing/data_preparation/manage_api_submission.py	2	9	132
data_management/importers/idaho-camera-traps.py	visualization/visualization_utils.py	2	9	237
api/batch_processing/postprocessing/postprocess_batch_results.py	visualization/visualize_db.py	2	178	72
api/batch_processing/postprocessing/postprocess_batch_results.py	api/batch_processing/data_preparation/manage_api_submission.py	2	178	132
api/batch_processing/postprocessing/postprocess_batch_results.py	data_management/importers/idaho-camera-traps.py	2	178	9
api/batch_processing/postprocessing/postprocess_batch_results.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	2	178	39
api/batch_processing/postprocessing/postprocess_batch_results.py	api/batch_processing/postprocessing/combine_api_outputs.py	2	178	27
data_management/importers/channel_islands_to_cct.py	visualization/visualize_db.py	2	10	72
data_management/importers/idfg_iwildcam_lila_prep.py	visualization/visualize_db.py	2	3	72
data_management/importers/idfg_iwildcam_lila_prep.py	data_management/importers/channel_islands_to_cct.py	2	3	10
classification/crop_detections.py	visualization/visualization_utils.py	2	13	237
data_management/annotations/add_bounding_boxes_to_megadb.py	data_management/megadb/megadb_utils.py	2	13	28
data_management/annotations/add_bounding_boxes_to_megadb.py	data_management/megadb/run_query.py	2	13	5
data_management/annotations/add_bounding_boxes_to_megadb.py	visualization/visualization_utils.py	2	13	237
visualization/visualize_incoming_annotations.py	data_management/annotations/add_bounding_boxes_to_megadb.py	2	51	13
api/batch_processing/api_core/batch_service/score.py	visualization/visualization_utils.py	2	8	237
api/batch_processing/api_core/batch_service/score.py	api/batch_processing/api_core/server.py	2	8	13
api/batch_processing/api_core/batch_service/score.py	api/batch_processing/api_core/server_api_config.py	2	8	10
environment.yml	visualization/visualization_utils.py	2	43	237
environment.yml	visualization/visualize_incoming_annotations.py	2	43	51
api/batch_processing/postprocessing/convert_output_format.py	visualization/visualization_utils.py	2	54	237
api/batch_processing/postprocessing/convert_output_format.py	classification/run_classifier.py	2	54	10
api/batch_processing/postprocessing/convert_output_format.py	classification/train_classifier.py	2	54	19
api/batch_processing/postprocessing/convert_output_format.py	classification/crop_detections.py	2	54	13
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	2	62	31
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/combine_api_outputs.py	2	62	27
classification/aggregate_classifier_probs.py	visualization/visualization_utils.py	2	8	237
classification/aggregate_classifier_probs.py	api/batch_processing/postprocessing/convert_output_format.py	2	8	54
classification/analyze_failed_images.py	visualization/visualization_utils.py	2	11	237
classification/analyze_failed_images.py	api/batch_processing/postprocessing/convert_output_format.py	2	11	54
classification/cache_batchapi_outputs.py	visualization/visualization_utils.py	2	9	237
classification/cache_batchapi_outputs.py	api/batch_processing/postprocessing/convert_output_format.py	2	9	54
classification/create_classification_dataset.py	visualization/visualization_utils.py	2	23	237
classification/create_classification_dataset.py	api/batch_processing/postprocessing/convert_output_format.py	2	23	54
classification/csv_to_json.py	visualization/visualization_utils.py	2	7	237
classification/csv_to_json.py	api/batch_processing/postprocessing/convert_output_format.py	2	7	54
classification/detect_and_crop.py	visualization/visualization_utils.py	2	17	237
classification/detect_and_crop.py	api/batch_processing/postprocessing/convert_output_format.py	2	17	54
classification/evaluate_model.py	visualization/visualization_utils.py	2	18	237
classification/evaluate_model.py	api/batch_processing/postprocessing/convert_output_format.py	2	18	54
classification/identify_mislabeled_candidates.py	visualization/visualization_utils.py	2	10	237
classification/identify_mislabeled_candidates.py	api/batch_processing/postprocessing/convert_output_format.py	2	10	54
classification/json_validator.py	visualization/visualization_utils.py	2	17	237
classification/json_validator.py	api/batch_processing/postprocessing/convert_output_format.py	2	17	54
classification/map_classification_categories.py	visualization/visualization_utils.py	2	8	237
classification/map_classification_categories.py	api/batch_processing/postprocessing/convert_output_format.py	2	8	54
classification/merge_classification_detection_output.py	visualization/visualization_utils.py	2	17	237
classification/merge_classification_detection_output.py	api/batch_processing/postprocessing/convert_output_format.py	2	17	54
classification/train_classifier_tf.py	visualization/visualization_utils.py	2	12	237
classification/train_classifier_tf.py	api/batch_processing/postprocessing/convert_output_format.py	2	12	54
classification/train_utils.py	visualization/visualization_utils.py	2	16	237
classification/train_utils.py	api/batch_processing/postprocessing/convert_output_format.py	2	16	54
data_management/importers/noaa_seals_2019.py	classification/run_classifier.py	2	3	10
data_management/importers/noaa_seals_2019.py	classification/train_classifier.py	2	3	19
data_management/importers/noaa_seals_2019.py	classification/crop_detections.py	2	3	13
data_management/importers/noaa_seals_2019.py	api/batch_processing/postprocessing/convert_output_format.py	2	3	54
data_management/importers/noaa_seals_2019.py	classification/aggregate_classifier_probs.py	2	3	8
data_management/importers/noaa_seals_2019.py	classification/analyze_failed_images.py	2	3	11
data_management/importers/noaa_seals_2019.py	classification/cache_batchapi_outputs.py	2	3	9
data_management/importers/noaa_seals_2019.py	classification/create_classification_dataset.py	2	3	23
data_management/importers/noaa_seals_2019.py	classification/csv_to_json.py	2	3	7
data_management/importers/noaa_seals_2019.py	classification/detect_and_crop.py	2	3	17
data_management/importers/noaa_seals_2019.py	classification/evaluate_model.py	2	3	18
data_management/importers/noaa_seals_2019.py	classification/identify_mislabeled_candidates.py	2	3	10
data_management/importers/noaa_seals_2019.py	classification/json_validator.py	2	3	17
data_management/importers/noaa_seals_2019.py	classification/map_classification_categories.py	2	3	8
data_management/importers/noaa_seals_2019.py	classification/merge_classification_detection_output.py	2	3	17
data_management/importers/noaa_seals_2019.py	classification/train_classifier_tf.py	2	3	12
data_management/importers/noaa_seals_2019.py	classification/train_utils.py	2	3	16
api/batch_processing/api_core/server_app_config.py	api/batch_processing/api_core/batch_service/score.py	2	4	8
api/batch_processing/api_core_support/aggregate_results_manually.py	visualization/visualize_detector_output.py	2	34	108
api/batch_processing/api_core_support/aggregate_results_manually.py	visualization/visualization_utils.py	2	34	237
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/data_preparation/manage_api_submission.py	2	34	132
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/postprocessing/subset_json_detector_output.py	2	34	83
api/synchronous/example/locustfile.py	visualization/visualize_detector_output.py	2	7	108
api/synchronous/example/locustfile.py	visualization/visualization_utils.py	2	7	237
api/synchronous/example/locustfile.py	api/batch_processing/data_preparation/manage_api_submission.py	2	7	132
api/synchronous/example/locustfile.py	api/batch_processing/postprocessing/subset_json_detector_output.py	2	7	83
api/synchronous/example/locustfile.py	api/batch_processing/api_core_support/aggregate_results_manually.py	2	7	34
data_management/cct_json_utils.py	visualization/visualization_utils.py	2	68	237
data_management/cct_json_utils.py	visualization/visualize_incoming_annotations.py	2	68	51
taxonomy_mapping/process_species_by_dataset.py	visualization/visualize_detector_output.py	2	18	108
taxonomy_mapping/process_species_by_dataset.py	visualization/visualization_utils.py	2	18	237
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/data_preparation/manage_api_submission.py	2	18	132
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/postprocessing/subset_json_detector_output.py	2	18	83
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core_support/aggregate_results_manually.py	2	18	34
taxonomy_mapping/process_species_by_dataset.py	api/synchronous/example/locustfile.py	2	18	7
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/postprocessing/combine_api_outputs.py	2	73	27
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/postprocessing/postprocess_batch_results.py	2	73	178
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/postprocessing/load_api_results.py	2	73	62
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/batch_service/score.py	2	5	8
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/server_app_config.py	2	5	4
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/server_batch_job_manager.py	2	5	5
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/batch_service/score.py	2	6	8
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server_app_config.py	2	6	4
api/batch_processing/api_core/server_utils.py	api/batch_processing/api_core/server_batch_job_manager.py	2	6	5
classification/prepare_classification_script.py	api/batch_processing/data_preparation/manage_local_batch.py	1	1	5
classification/prepare_classification_script_mc.py	api/batch_processing/data_preparation/manage_local_batch.py	1	1	5
classification/prepare_classification_script_mc.py	classification/prepare_classification_script.py	1	1	1
detection/video_utils.py	api/batch_processing/data_preparation/manage_local_batch.py	1	15	5
detection/video_utils.py	detection/run_tf_detector_batch.py	1	15	189
data_management/lila/download_lila_subset.py	data_management/lila/create_lila_test_set.py	1	1	1
data_management/lila/generate_lila_sas_urls.py	data_management/lila/create_lila_test_set.py	1	1	1
data_management/lila/generate_lila_sas_urls.py	data_management/lila/download_lila_subset.py	1	1	1
data_management/lila/get_lila_category_counts.py	data_management/lila/create_lila_test_set.py	1	1	1
data_management/lila/get_lila_category_counts.py	data_management/lila/download_lila_subset.py	1	1	1
data_management/lila/get_lila_category_counts.py	data_management/lila/generate_lila_sas_urls.py	1	1	1
data_management/lila/get_lila_category_list.py	data_management/lila/create_lila_test_set.py	1	1	1
data_management/lila/get_lila_category_list.py	data_management/lila/download_lila_subset.py	1	1	1
data_management/lila/get_lila_category_list.py	data_management/lila/generate_lila_sas_urls.py	1	1	1
data_management/lila/get_lila_category_list.py	data_management/lila/get_lila_category_counts.py	1	1	1
research/umn-pr-analysis.py	data_management/importers/umn_to_json.py	1	13	1
research/umn-pr-analysis.py	detection/video_utils.py	1	13	15
research/umn-pr-analysis.py	detection/run_tf_detector_batch.py	1	13	189
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.Designer.cs	1	23	20
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Properties/AssemblyInfo.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.Designer.cs	1	17	20
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Properties/AssemblyInfo.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.cs	1	17	23
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/SubsetJsonDetectorOutput.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.Designer.cs	1	27	20
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/SubsetJsonDetectorOutput.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Form.cs	1	27	23
api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/SubsetJsonDetectorOutput.cs	api/batch_processing/postprocessing/CameraTrapJsonFileProcessingApp/Properties/AssemblyInfo.cs	1	27	17
visualization/visualize_detector_output.py	research/umn-pr-analysis.py	1	108	13
visualization/visualize_detector_output.py	detection/run_tf_detector_batch.py	1	108	189
data_management/megadb/download_images.py	ct_utils.py	1	11	43
data_management/megadb/megadb_utils.py	ct_utils.py	1	28	43
data_management/megadb/split_images.py	ct_utils.py	1	8	43
data_management/tfrecords/make_tfrecords_megadb.py	ct_utils.py	1	5	43
data_management/tfrecords/make_tfrecords_megadb.py	data_management/megadb/download_images.py	1	5	11
data_management/tfrecords/make_tfrecords_megadb.py	data_management/megadb/megadb_utils.py	1	5	28
data_management/tfrecords/make_tfrecords_megadb.py	data_management/megadb/run_query.py	1	5	5
data_management/tfrecords/make_tfrecords_megadb.py	data_management/megadb/split_images.py	1	5	8
data_management/tfrecords/utils/create_tfrecords.py	ct_utils.py	1	20	43
data_management/tfrecords/utils/create_tfrecords.py	data_management/megadb/download_images.py	1	20	11
data_management/tfrecords/utils/create_tfrecords.py	data_management/megadb/megadb_utils.py	1	20	28
data_management/tfrecords/utils/create_tfrecords.py	data_management/megadb/run_query.py	1	20	5
data_management/tfrecords/utils/create_tfrecords.py	data_management/megadb/split_images.py	1	20	8
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/megadb/download_images.py	1	2	11
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/megadb/megadb_utils.py	1	2	28
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/megadb/split_images.py	1	2	8
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/tfrecords/make_tfrecords_megadb.py	1	2	5
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	data_management/tfrecords/utils/create_tfrecords.py	1	2	20
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/megadb/download_images.py	1	2	11
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/megadb/megadb_utils.py	1	2	28
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/megadb/split_images.py	1	2	8
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/tfrecords/make_tfrecords_megadb.py	1	2	5
detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	data_management/tfrecords/utils/create_tfrecords.py	1	2	20
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/megadb/download_images.py	1	2	11
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/megadb/megadb_utils.py	1	2	28
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/megadb/split_images.py	1	2	8
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/tfrecords/make_tfrecords_megadb.py	1	2	5
detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	data_management/tfrecords/utils/create_tfrecords.py	1	2	20
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/megadb/download_images.py	1	2	11
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/megadb/megadb_utils.py	1	2	28
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/megadb/split_images.py	1	2	8
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/tfrecords/make_tfrecords_megadb.py	1	2	5
detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	data_management/tfrecords/utils/create_tfrecords.py	1	2	20
detection/detector_training/model_main_tf2.py	ct_utils.py	1	2	43
detection/detector_training/model_main_tf2.py	data_management/megadb/download_images.py	1	2	11
detection/detector_training/model_main_tf2.py	data_management/megadb/megadb_utils.py	1	2	28
detection/detector_training/model_main_tf2.py	data_management/megadb/run_query.py	1	2	5
detection/detector_training/model_main_tf2.py	data_management/megadb/split_images.py	1	2	8
detection/detector_training/model_main_tf2.py	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_coco_inat.yml	1	2	2
detection/detector_training/model_main_tf2.py	detection/detector_training/experiments/megadetector_v5_yolo/data_camtrap_images_only.yml	1	2	2
detection/detector_training/model_main_tf2.py	detection/detector_training/experiments/megadetector_v5_yolo/hyp_mosaic.yml	1	2	2
detection/detector_training/model_main_tf2.py	detection/detector_training/experiments/megadetector_v5_yolo/hyp_no_mosaic.yml	1	2	2
visualization/visualize_db.py	data_management/megadb/download_images.py	1	72	11
visualization/visualize_db.py	data_management/megadb/megadb_utils.py	1	72	28
visualization/visualize_db.py	data_management/megadb/split_images.py	1	72	8
visualization/visualize_db.py	data_management/tfrecords/make_tfrecords_megadb.py	1	72	5
visualization/visualize_db.py	data_management/tfrecords/utils/create_tfrecords.py	1	72	20
visualization/visualize_db.py	detection/detector_training/model_main_tf2.py	1	72	2
data_management/databases/add_width_and_height_to_database.py	visualization/visualize_db.py	1	8	72
data_management/get_image_sizes.py	visualization/visualize_db.py	1	1	72
data_management/get_image_sizes.py	data_management/databases/add_width_and_height_to_database.py	1	1	8
visualization/visualization_utils.py	data_management/databases/add_width_and_height_to_database.py	1	237	8
visualization/visualization_utils.py	data_management/get_image_sizes.py	1	237	1
visualization/visualization_utils.py	detection/run_tf_detector_batch.py	1	237	189
visualization/visualization_utils.py	detection/video_utils.py	1	237	15
api/batch_processing/data_preparation/manage_api_submission.py	research/umn-pr-analysis.py	1	132	13
api/batch_processing/data_preparation/manage_api_submission.py	visualization/visualize_db.py	1	132	72
api/batch_processing/data_preparation/manage_api_submission.py	detection/process_video.py	1	132	24
api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	research/umn-pr-analysis.py	1	39	13
api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	visualization/visualization_utils.py	1	39	237
classification/run_classifier.py	api/batch_processing/data_preparation/manage_api_submission.py	1	10	132
classification/train_classifier.py	api/batch_processing/data_preparation/manage_api_submission.py	1	19	132
environment-classifier-training.yml	api/batch_processing/data_preparation/manage_api_submission.py	1	1	132
environment-classifier-training.yml	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	1	39
environment-classifier-training.yml	classification/run_classifier.py	1	1	10
environment-classifier-training.yml	classification/train_classifier.py	1	1	19
environment-classifier.yml	api/batch_processing/data_preparation/manage_api_submission.py	1	17	132
environment-classifier.yml	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	17	39
environment-classifier.yml	classification/run_classifier.py	1	17	10
environment-classifier.yml	classification/train_classifier.py	1	17	19
environment-classifier.yml	environment-classifier-training.yml	1	17	1
sandbox/video_json_to_csv.py	detection/process_video.py	1	3	24
sandbox/video_json_to_csv.py	detection/video_utils.py	1	3	15
sandbox/video_json_to_csv.py	research/umn-pr-analysis.py	1	3	13
detection/run_tf_detector.py	api/batch_processing/data_preparation/manage_api_submission.py	1	154	132
environment-detector.yml	api/batch_processing/data_preparation/manage_api_submission.py	1	25	132
api_flask_redis/api_core/animal_detection_api/api_backend.py	detection/process_video.py	1	16	24
api_flask_redis/api_core/animal_detection_api/api_backend.py	detection/video_utils.py	1	16	15
api_flask_redis/api_core/animal_detection_api/api_backend.py	visualization/visualize_detector_output.py	1	16	108
api_flask_redis/api_core/animal_detection_api/api_frontend.py	detection/process_video.py	1	26	24
api_flask_redis/api_core/animal_detection_api/api_frontend.py	detection/video_utils.py	1	26	15
api_flask_redis/api_core/animal_detection_api/api_frontend.py	visualization/visualize_detector_output.py	1	26	108
api_flask_redis/api_core/animal_detection_api/config.py	detection/process_video.py	1	13	24
api_flask_redis/api_core/animal_detection_api/config.py	detection/video_utils.py	1	13	15
api_flask_redis/api_core/animal_detection_api/config.py	visualization/visualize_detector_output.py	1	13	108
data_management/importers/snapshot_safari_importer.py	research/umn-pr-analysis.py	1	17	13
data_management/md_to_coco_starter_code.py	research/umn-pr-analysis.py	1	2	13
data_management/md_to_coco_starter_code.py	api/batch_processing/data_preparation/manage_api_submission.py	1	2	132
data_management/md_to_coco_starter_code.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	2	39
data_management/md_to_coco_starter_code.py	data_management/importers/snapshot_safari_importer.py	1	2	17
visualization/plot_utils.py	api/batch_processing/data_preparation/manage_api_submission.py	1	12	132
visualization/plot_utils.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	12	39
visualization/plot_utils.py	data_management/importers/snapshot_safari_importer.py	1	12	17
visualization/plot_utils.py	data_management/md_to_coco_starter_code.py	1	12	2
api/batch_processing/postprocessing/separate_detections_into_folders.py	visualization/visualization_utils.py	1	31	237
api/batch_processing/postprocessing/separate_detections_into_folders.py	classification/run_classifier.py	1	31	10
api/batch_processing/postprocessing/separate_detections_into_folders.py	classification/train_classifier.py	1	31	19
api/batch_processing/postprocessing/separate_detections_into_folders.py	detection/video_utils.py	1	31	15
api/batch_processing/postprocessing/separate_detections_into_folders.py	api/batch_processing/data_preparation/manage_api_submission.py	1	31	132
api/batch_processing/postprocessing/top_folders_to_bottom.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	1	31
api/batch_processing/postprocessing/repeat_detection_elimination/find_repeat_detections.py	api/batch_processing/data_preparation/manage_api_submission.py	1	11	132
api/batch_processing/postprocessing/repeat_detection_elimination/find_repeat_detections.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	11	39
api/batch_processing/postprocessing/repeat_detection_elimination/remove_repeat_detections.py	api/batch_processing/data_preparation/manage_api_submission.py	1	11	132
api/batch_processing/postprocessing/repeat_detection_elimination/remove_repeat_detections.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	11	39
api/batch_processing/postprocessing/subset_json_detector_output.py	detection/process_video.py	1	83	24
api/batch_processing/postprocessing/subset_json_detector_output.py	detection/run_tf_detector_batch.py	1	83	189
api/batch_processing/postprocessing/combine_api_outputs.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	27	39
api/batch_processing/postprocessing/combine_api_outputs.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	27	83
data_management/read_exif.py	api/batch_processing/data_preparation/manage_api_submission.py	1	1	132
data_management/remove_exif.py	api/batch_processing/data_preparation/manage_api_submission.py	1	1	132
data_management/remove_exif.py	data_management/read_exif.py	1	1	1
api/batch_processing/api_core/server.py	detection/process_video.py	1	13	24
api/batch_processing/api_core/server.py	detection/run_tf_detector_batch.py	1	13	189
api/batch_processing/api_core/server.py	visualization/visualize_detector_output.py	1	13	108
api/batch_processing/api_core/server.py	visualization/visualization_utils.py	1	13	237
api/batch_processing/api_core/server.py	api/batch_processing/data_preparation/manage_api_submission.py	1	13	132
api/batch_processing/api_core/server.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	13	83
api/batch_processing/api_core/server_api_config.py	detection/process_video.py	1	10	24
api/batch_processing/api_core/server_api_config.py	detection/run_tf_detector_batch.py	1	10	189
api/batch_processing/api_core/server_api_config.py	visualization/visualize_detector_output.py	1	10	108
api/batch_processing/api_core/server_api_config.py	visualization/visualization_utils.py	1	10	237
api/batch_processing/api_core/server_api_config.py	api/batch_processing/data_preparation/manage_api_submission.py	1	10	132
api/batch_processing/api_core/server_api_config.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	10	83
api/batch_processing/api_core/server_orchestration.py	detection/process_video.py	1	8	24
api/batch_processing/api_core/server_orchestration.py	detection/run_tf_detector_batch.py	1	8	189
api/batch_processing/api_core/server_orchestration.py	visualization/visualize_detector_output.py	1	8	108
api/batch_processing/api_core/server_orchestration.py	visualization/visualization_utils.py	1	8	237
api/batch_processing/api_core/server_orchestration.py	api/batch_processing/data_preparation/manage_api_submission.py	1	8	132
api/batch_processing/api_core/server_orchestration.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	8	83
api/batch_processing/postprocessing/postprocess_batch_results.py	classification/run_classifier.py	1	178	10
api/batch_processing/postprocessing/postprocess_batch_results.py	classification/train_classifier.py	1	178	19
api/batch_processing/postprocessing/postprocess_batch_results.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	178	31
api/batch_processing/postprocessing/postprocess_batch_results.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	178	83
data_management/importers/channel_islands_to_cct.py	visualization/visualization_utils.py	1	10	237
data_management/importers/channel_islands_to_cct.py	api/batch_processing/data_preparation/manage_api_submission.py	1	10	132
data_management/importers/channel_islands_to_cct.py	data_management/importers/idaho-camera-traps.py	1	10	9
data_management/importers/channel_islands_to_cct.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	10	178
data_management/importers/idfg_iwildcam_lila_prep.py	visualization/visualization_utils.py	1	3	237
data_management/importers/idfg_iwildcam_lila_prep.py	api/batch_processing/data_preparation/manage_api_submission.py	1	3	132
data_management/importers/idfg_iwildcam_lila_prep.py	data_management/importers/idaho-camera-traps.py	1	3	9
data_management/importers/idfg_iwildcam_lila_prep.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	3	178
classification/crop_detections.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	13	39
classification/crop_detections.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	13	31
classification/crop_detections.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	13	178
api/batch_processing/postprocessing/categorize_detections_by_size.py	api/batch_processing/data_preparation/manage_api_submission.py	1	2	132
visualization/visualize_incoming_annotations.py	data_management/megadb/megadb_utils.py	1	51	28
visualization/visualize_incoming_annotations.py	data_management/megadb/run_query.py	1	51	5
visualization/visualize_incoming_annotations.py	detection/process_video.py	1	51	24
visualization/visualize_incoming_annotations.py	detection/run_tf_detector_batch.py	1	51	189
visualization/visualize_incoming_annotations.py	visualization/visualize_detector_output.py	1	51	108
visualization/visualize_incoming_annotations.py	api/batch_processing/data_preparation/manage_api_submission.py	1	51	132
visualization/visualize_incoming_annotations.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	51	83
visualization/visualize_incoming_annotations.py	api/batch_processing/api_core/server.py	1	51	13
visualization/visualize_incoming_annotations.py	api/batch_processing/api_core/server_api_config.py	1	51	10
visualization/visualize_incoming_annotations.py	api/batch_processing/api_core/server_orchestration.py	1	51	8
data_management/databases/sanity_check_json_db.py	visualization/visualize_db.py	1	81	72
api/batch_processing/api_core/batch_service/score.py	visualization/visualize_incoming_annotations.py	1	8	51
api/batch_processing/api_core/batch_service/score.py	api/batch_processing/api_core/server_orchestration.py	1	8	8
environment.yml	api/batch_processing/api_core/batch_service/score.py	1	43	8
api/batch_processing/postprocessing/convert_output_format.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	54	39
api/batch_processing/postprocessing/convert_output_format.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	54	31
api/batch_processing/postprocessing/convert_output_format.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	54	178
api/batch_processing/postprocessing/load_api_results.py	visualization/visualization_utils.py	1	62	237
api/batch_processing/postprocessing/load_api_results.py	classification/run_classifier.py	1	62	10
api/batch_processing/postprocessing/load_api_results.py	classification/train_classifier.py	1	62	19
api/batch_processing/postprocessing/load_api_results.py	classification/crop_detections.py	1	62	13
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/convert_output_format.py	1	62	54
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/data_preparation/manage_api_submission.py	1	62	132
api/batch_processing/postprocessing/load_api_results.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	62	83
classification/aggregate_classifier_probs.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	8	39
classification/aggregate_classifier_probs.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	8	31
classification/aggregate_classifier_probs.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	8	178
classification/aggregate_classifier_probs.py	api/batch_processing/postprocessing/load_api_results.py	1	8	62
classification/analyze_failed_images.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	11	39
classification/analyze_failed_images.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	11	31
classification/analyze_failed_images.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	11	178
classification/analyze_failed_images.py	api/batch_processing/postprocessing/load_api_results.py	1	11	62
classification/cache_batchapi_outputs.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	9	39
classification/cache_batchapi_outputs.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	9	31
classification/cache_batchapi_outputs.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	9	178
classification/cache_batchapi_outputs.py	api/batch_processing/postprocessing/load_api_results.py	1	9	62
classification/create_classification_dataset.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	23	39
classification/create_classification_dataset.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	23	31
classification/create_classification_dataset.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	23	178
classification/create_classification_dataset.py	api/batch_processing/postprocessing/load_api_results.py	1	23	62
classification/csv_to_json.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	7	39
classification/csv_to_json.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	7	31
classification/csv_to_json.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	7	178
classification/csv_to_json.py	api/batch_processing/postprocessing/load_api_results.py	1	7	62
classification/detect_and_crop.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	17	39
classification/detect_and_crop.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	17	31
classification/detect_and_crop.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	17	178
classification/detect_and_crop.py	api/batch_processing/postprocessing/load_api_results.py	1	17	62
classification/evaluate_model.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	18	39
classification/evaluate_model.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	18	31
classification/evaluate_model.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	18	178
classification/evaluate_model.py	api/batch_processing/postprocessing/load_api_results.py	1	18	62
classification/identify_mislabeled_candidates.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	10	39
classification/identify_mislabeled_candidates.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	10	31
classification/identify_mislabeled_candidates.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	10	178
classification/identify_mislabeled_candidates.py	api/batch_processing/postprocessing/load_api_results.py	1	10	62
classification/json_validator.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	17	39
classification/json_validator.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	17	31
classification/json_validator.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	17	178
classification/json_validator.py	api/batch_processing/postprocessing/load_api_results.py	1	17	62
classification/map_classification_categories.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	8	39
classification/map_classification_categories.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	8	31
classification/map_classification_categories.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	8	178
classification/map_classification_categories.py	api/batch_processing/postprocessing/load_api_results.py	1	8	62
classification/merge_classification_detection_output.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	17	39
classification/merge_classification_detection_output.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	17	31
classification/merge_classification_detection_output.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	17	178
classification/merge_classification_detection_output.py	api/batch_processing/postprocessing/load_api_results.py	1	17	62
classification/train_classifier_tf.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	12	39
classification/train_classifier_tf.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	12	31
classification/train_classifier_tf.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	12	178
classification/train_classifier_tf.py	api/batch_processing/postprocessing/load_api_results.py	1	12	62
classification/train_utils.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	16	39
classification/train_utils.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	16	31
classification/train_utils.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	16	178
classification/train_utils.py	api/batch_processing/postprocessing/load_api_results.py	1	16	62
data_management/importers/noaa_seals_2019.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	3	39
data_management/importers/noaa_seals_2019.py	api/batch_processing/postprocessing/separate_detections_into_folders.py	1	3	31
data_management/importers/noaa_seals_2019.py	api/batch_processing/postprocessing/postprocess_batch_results.py	1	3	178
data_management/importers/noaa_seals_2019.py	api/batch_processing/postprocessing/load_api_results.py	1	3	62
api/batch_processing/api_core/server_app_config.py	detection/process_video.py	1	4	24
api/batch_processing/api_core/server_app_config.py	detection/run_tf_detector_batch.py	1	4	189
api/batch_processing/api_core/server_app_config.py	visualization/visualize_detector_output.py	1	4	108
api/batch_processing/api_core/server_app_config.py	visualization/visualization_utils.py	1	4	237
api/batch_processing/api_core/server_app_config.py	api/batch_processing/data_preparation/manage_api_submission.py	1	4	132
api/batch_processing/api_core/server_app_config.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	4	83
api/batch_processing/api_core/server_app_config.py	visualization/visualize_incoming_annotations.py	1	4	51
api/batch_processing/api_core/server_batch_job_manager.py	detection/process_video.py	1	5	24
api/batch_processing/api_core/server_batch_job_manager.py	detection/run_tf_detector_batch.py	1	5	189
api/batch_processing/api_core/server_batch_job_manager.py	visualization/visualize_detector_output.py	1	5	108
api/batch_processing/api_core/server_batch_job_manager.py	visualization/visualization_utils.py	1	5	237
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/data_preparation/manage_api_submission.py	1	5	132
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	5	83
api/batch_processing/api_core/server_batch_job_manager.py	visualization/visualize_incoming_annotations.py	1	5	51
api/batch_processing/api_core/server_batch_job_manager.py	api/batch_processing/api_core/batch_service/score.py	1	5	8
api/batch_processing/api_core_support/aggregate_results_manually.py	detection/process_video.py	1	34	24
api/batch_processing/api_core_support/aggregate_results_manually.py	detection/run_tf_detector_batch.py	1	34	189
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/api_core/server.py	1	34	13
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/api_core/server_api_config.py	1	34	10
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/api_core/server_orchestration.py	1	34	8
api/batch_processing/api_core_support/aggregate_results_manually.py	visualization/visualize_incoming_annotations.py	1	34	51
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/api_core/server_app_config.py	1	34	4
api/batch_processing/api_core_support/aggregate_results_manually.py	api/batch_processing/api_core/server_batch_job_manager.py	1	34	5
api/synchronous/example/locustfile.py	detection/process_video.py	1	7	24
api/synchronous/example/locustfile.py	detection/run_tf_detector_batch.py	1	7	189
api/synchronous/example/locustfile.py	api/batch_processing/api_core/server.py	1	7	13
api/synchronous/example/locustfile.py	api/batch_processing/api_core/server_api_config.py	1	7	10
api/synchronous/example/locustfile.py	api/batch_processing/api_core/server_orchestration.py	1	7	8
api/synchronous/example/locustfile.py	visualization/visualize_incoming_annotations.py	1	7	51
api/synchronous/example/locustfile.py	api/batch_processing/api_core/server_app_config.py	1	7	4
api/synchronous/example/locustfile.py	api/batch_processing/api_core/server_batch_job_manager.py	1	7	5
data_management/cct_json_utils.py	detection/process_video.py	1	68	24
data_management/cct_json_utils.py	detection/run_tf_detector_batch.py	1	68	189
data_management/cct_json_utils.py	visualization/visualize_detector_output.py	1	68	108
data_management/cct_json_utils.py	api/batch_processing/data_preparation/manage_api_submission.py	1	68	132
data_management/cct_json_utils.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	68	83
data_management/cct_json_utils.py	api/batch_processing/api_core/server.py	1	68	13
data_management/cct_json_utils.py	api/batch_processing/api_core/server_api_config.py	1	68	10
data_management/cct_json_utils.py	api/batch_processing/api_core/server_orchestration.py	1	68	8
data_management/cct_json_utils.py	api/batch_processing/api_core/server_app_config.py	1	68	4
data_management/cct_json_utils.py	api/batch_processing/api_core/server_batch_job_manager.py	1	68	5
data_management/cct_json_utils.py	api/batch_processing/api_core_support/aggregate_results_manually.py	1	68	34
data_management/cct_json_utils.py	api/synchronous/example/locustfile.py	1	68	7
taxonomy_mapping/process_species_by_dataset.py	detection/process_video.py	1	18	24
taxonomy_mapping/process_species_by_dataset.py	detection/run_tf_detector_batch.py	1	18	189
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core/server.py	1	18	13
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core/server_api_config.py	1	18	10
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core/server_orchestration.py	1	18	8
taxonomy_mapping/process_species_by_dataset.py	visualization/visualize_incoming_annotations.py	1	18	51
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core/server_app_config.py	1	18	4
taxonomy_mapping/process_species_by_dataset.py	api/batch_processing/api_core/server_batch_job_manager.py	1	18	5
taxonomy_mapping/process_species_by_dataset.py	data_management/cct_json_utils.py	1	18	68
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py	1	73	39
api/batch_processing/data_preparation/prepare_api_submission.py	api/batch_processing/postprocessing/subset_json_detector_output.py	1	73	83
api/batch_processing/api_core/environment-batch-api.yml	api/batch_processing/api_core/server.py	1	1	13
api/batch_processing/api_core/environment-batch-api.yml	api/batch_processing/api_core/server_api_config.py	1	1	10
api/batch_processing/api_core/environment-batch-api.yml	api/batch_processing/api_core/server_orchestration.py	1	1	8
api/batch_processing/api_core/server_job_status_table.py	api/batch_processing/api_core/environment-batch-api.yml	1	5	1
api/batch_processing/api_support/summarize_daily_activity.py	api/batch_processing/api_core/server.py	1	1	13
api/batch_processing/api_support/summarize_daily_activity.py	api/batch_processing/api_core/server_api_config.py	1	1	10
api/batch_processing/api_support/summarize_daily_activity.py	api/batch_processing/api_core/server_orchestration.py	1	1	8
api/batch_processing/api_support/summarize_daily_activity.py	api/batch_processing/api_core/environment-batch-api.yml	1	1	1
api/batch_processing/api_support/summarize_daily_activity.py	api/batch_processing/api_core/server_job_status_table.py	1	1	5