snakemake/profiles/local/config.yaml (15 lines of code) (raw):
verbose: false
use-conda: true
resources: gpu=8
cores: all
cache: false
reason: true
config:
# install dependencies on a local machine
- deps=true
# root path to a folder with data, models and logs
- root=/data
- cuda=/usr/local/cuda
- cudnn=/cudnn
# how much memory Marian reserves on a GPU
- workspace=12000
# a number of GPUs you want to use
- numgpus=8
- mariancmake=""
# (optional) override available GPU ids, example gpus=0 2 5 6
- gpus=""