in mlebench/competitions/inaturalist-2019-fgvc6/grade.py [0:0]
def prepare_for_metric(submission: pd.DataFrame, answers: pd.DataFrame):
"""
`submission` and `answers` are pd.DataFrame with "id" and "predicted" columns
"""
if len(submission) != len(answers):
raise InvalidSubmissionError(
f"Submission length {len(submission)} != answers length {len(answers)}"
)
if "id" not in submission.columns or "predicted" not in submission.columns:
raise InvalidSubmissionError("Submission must have 'id' and 'predicted' columns")
assert "id" in answers.columns, "Answers must have 'id' column"
assert "predicted" in answers.columns, "Answers must have 'predicted' column"
# Sort submission and answers by "id"
submission = submission.sort_values("id")
answers = answers.sort_values("id")
if (submission["id"].values != answers["id"].values).any():
raise InvalidSubmissionError("Submission and answers have mismatched 'id' columns")
y_true = [int(y) for y in answers["predicted"]]
y_pred = [int(y) if isinstance(y, int) else int(y.split()[0]) for y in submission["predicted"]]
return y_true, y_pred