aws-samples / bioimage-search
Duplication

Places in code with 6 or more lines that are exactly the same.

Intro
  • For duplication, we look at places in code where there are 6 or more lines of code that are exactly the same.
  • Before duplication is calculated, the code is cleaned to remove empty lines, comments, and frequently duplicated constructs such as imports.
  • You should aim at having as little as possible (<5%) of duplicated code as high-level of duplication can lead to maintenance difficulties, poor factoring, and logical contradictions.
Learn more...
Duplication Overall
  • 24% duplication:
    • 8,497 cleaned lines of cleaned code (without empty lines, comments, and frequently duplicated constructs such as imports)
    • 2,059 duplicated lines
  • 2,046 duplicates
system24% (2,059 lines)
Duplication per Extension
ts24% (1,198 lines)
py26% (841 lines)
java4% (20 lines)
Duplication per Component (primary)
cli/bioims/src54% (618 lines)
main/cdk25% (511 lines)
main/src/image-management29% (228 lines)
datasets/bbbc-021/scripts20% (167 lines)
main/src/search19% (100 lines)
main/src/training-configuration25% (76 lines)
main/src/label24% (66 lines)
main/src/message29% (47 lines)
main/src/process-plate38% (42 lines)
main/src/configuration24% (34 lines)
main/src/training-compute23% (31 lines)
main/src/train21% (27 lines)
main/src/embedding-management58% (23 lines)
main/src/search-service4% (20 lines)
main/src/common-node20% (20 lines)
main/src/tag10% (15 lines)
main/scripts68% (11 lines)
main/src/artifact6% (9 lines)
main/src/image-inspector8% (7 lines)
main/src/training-build7% (7 lines)
datasets/bbbc-021/cdk0% (0 lines)
main/src/image-artifact0% (0 lines)
main/src/common0% (0 lines)
main/src/plate-preprocessing0% (0 lines)
main/src/embedding-compute0% (0 lines)
main/src/image-preprocessing0% (0 lines)

Duplication Between Components (50+ lines)

G main/src/image-management main/src/image-management main/src/search main/src/search main/src/image-management--main/src/search 151 main/src/process-plate main/src/process-plate main/src/image-management--main/src/process-plate 56 main/src/training-configuration main/src/training-configuration main/src/search--main/src/training-configuration 74 main/src/configuration main/src/configuration main/src/message main/src/message main/src/configuration--main/src/message 57 main/src/process-plate--main/src/search 54 main/src/embedding-management main/src/embedding-management main/src/embedding-management--main/src/process-plate 52

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Show more details on duplication between components...
Longest Duplicates
The list of 20 longest duplicates.
See data for all 2,046 duplicates...
Size#FoldersFilesLinesCode
52 x 2 main/cdk
main/cdk
process-plate-stack.ts
process-plate-stack.ts
 531:599 (9%)
627:689 (9%)
 view
40 x 2 main/cdk
main/cdk
embedding-stack.ts
train-stack.ts
 168:219 (19%)
71:122 (18%)
 view
21 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
embedding-compute-helper.py
run-training-helper.py
 25:45 (67%)
28:48 (65%)
 view
20 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 417:437 (2%)
528:548 (2%)
 view
20 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
apply-tags.py
generate_train_filters.py
 7:37 (24%)
55:85 (28%)
 view
14 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 451:467 (1%)
562:578 (1%)
 view
13 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
generate_tags.py
generate_train_filters.py
 7:29 (20%)
55:77 (18%)
 view
13 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
apply-tags.py
generate_tags.py
 7:29 (15%)
7:29 (20%)
 view
13 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 309:321 (1%)
345:357 (1%)
 view
13 x 2 main/cdk
main/cdk
embedding-stack.ts
train-stack.ts
 238:253 (6%)
142:157 (6%)
 view
12 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
generate_tags.py
get-train-input-helper.py
 7:25 (19%)
7:25 (46%)
 view
12 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
embedding-compute-helper.py
embedding-upload-helper.py
 25:36 (38%)
25:36 (40%)
 view
12 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
generate_train_filters.py
get-train-input-helper.py
 55:73 (17%)
7:25 (46%)
 view
12 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
apply-tags.py
get-train-input-helper.py
 7:25 (14%)
7:25 (46%)
 view
12 x 2 datasets/bbbc-021/scripts
datasets/bbbc-021/scripts
embedding-upload-helper.py
run-training-helper.py
 25:36 (40%)
28:39 (37%)
 view
11 x 2 main/scripts
main/src/training-compute
fsxl-helper.py
training-compute.py
 7:19 (68%)
35:45 (8%)
 view
11 x 2 main/src/image-management
main/src/search
image-management.ts
search.ts
 728:739 (1%)
435:446 (2%)
 view
11 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 112:123 (1%)
728:739 (1%)
 view
11 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 112:123 (1%)
567:578 (1%)
 view
11 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 456:467 (1%)
728:739 (1%)
 view
Duplicated Units
The list of top 5 duplicated units.
See data for all 5 unit duplicates...
Size#FoldersFilesLinesCode
13 x 2 main/src/configuration
main/src/message
configuration.ts
message.ts
 47:60 
90:103 
 view
12 x 2 main/src/configuration
main/src/tag
configuration.ts
tag.ts
 62:74 
115:127 
 view
10 x 2 main/src/search
main/src/search
search.ts
search.ts
 86:99 
101:114 
 view
9 x 2 main/src/image-management
main/src/image-management
image-management.ts
image-management.ts
 88:97 
293:302 
 view
7 x 2 main/src/embedding-management
main/src/process-plate
embedding-management.ts
process-plate.ts
 8:16 
57:65 
 view