anthropics/knowledge-work-plugins
File Age & Freshness
File age measurements show the distribution of file ages (days since the first commit) and the file freshness (days since the latest commit).
File Change History Overall
File Age Distribution Overall
Days since first update
  • There are 5 files with 3,632 lines of code in files.
    • 0 files that are 366+ days old (0 lines of code)
    • 2 files that are 181-365 days old (549 lines of code)
    • 1 files that are 91-180 days old (99 lines of code)
    • 1 files that are 31-90 days old (2,689 lines of code)
    • 1 files that are 1-30 days old (295 lines of code)
0% | 15% | 2% | 74% | 8%
Legend:
366+
181-365
91-180
31-90
1-30

explore: grouped by folders | grouped by age
File Freshness Distribution Overall
Days since last update
  • There are 5 files with 3,632 lines of code in files.
    • 0 files have been last changed 366+ days ago (0 lines of code)
    • 2 files have been last changed 181-365 days ago (549 lines of code)
    • 1 files have been last changed 91-180 days ago (99 lines of code)
    • 1 files have been last changed 31-90 days ago (2,689 lines of code)
    • 1 files have been last changed 1-30 days ago (295 lines of code)
0% | 15% | 2% | 74% | 8%
Legend:
366+
181-365
91-180
31-90
1-30

explore: grouped by folders | grouped by freshness
File Change History per File Extension
md, json, py, txt, yml, yaml, html, js
File Age Distribution per Extension
Days since first update
366+
181-365
91-180
31-90
1-30
py0% | 100% | 0% | 0% | 0%
js0% | 0% | 100% | 0% | 0%
html0% | 0% | 0% | 90% | 9%
yaml0% | 0% | 0% | 0% | 0%
File Freshness Distribution per Extension
Days since last update
366+
181-365
91-180
31-90
1-30
py0% | 100% | 0% | 0% | 0%
js0% | 0% | 100% | 0% | 0%
html0% | 0% | 0% | 90% | 9%
yaml0% | 0% | 0% | 0% | 0%
File Change History per Logical Decomposition
primary
primary (file age distribution)
Days since first update
366+
181-365
91-180
31-90
1-30
bio-research0% | 100% | 0% | 0% | 0%
.github0% | 0% | 100% | 0% | 0%
productivity0% | 0% | 0% | 100% | 0%
small-business0% | 0% | 0% | 0% | 100%
data0% | 0% | 0% | 0% | 0%
primary (file freshness distribution)
Days since last update
366+
181-365
91-180
31-90
1-30
bio-research0% | 100% | 0% | 0% | 0%
.github0% | 0% | 100% | 0% | 0%
productivity0% | 0% | 0% | 100% | 0%
small-business0% | 0% | 0% | 0% | 100%
data0% | 0% | 0% | 0% | 0%
Oldest Files (Top 33)
File# lines# unitscreatedlast modified# changes
(days)		# contributorsfirst
contributor		latest
contributor
check_environment.py
in bio-research/skills/nextflow-development/scripts
 348 9 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
detect_data_type.py
in bio-research/skills/nextflow-development/scripts
 201 6 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
external-pr-scope.js
in .github/scripts
 99 7 2026-07-01 2026-07-01 1 1 bthompson@anthropic.com bthompson@anthropic.com
dashboard.html
in productivity/skills
 2689 - 2026-08-07 2026-08-07 1 1 jakemarsh@anthropic.com jakemarsh@anthropic.com
artifact-example.html
in small-business/shared/reference
 295 - 2026-09-15 2026-09-15 1 1 tobin.south@gmail.com tobin.south@gmail.com
validate_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 815 24
sra_geo_fetch.py
in bio-research/skills/nextflow-development/scripts
 511 11
ncbi_utils.py
in bio-research/skills/nextflow-development/scripts/utils
 509 16
convert_to_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 386 11
manage_genomes.py
in bio-research/skills/nextflow-development/scripts
 368 9
model_utils.py
in bio-research/skills/scvi-tools/scripts
 319 10
generate_samplesheet.py
in bio-research/skills/nextflow-development/scripts
 288 10
validate_adata.py
in bio-research/skills/scvi-tools/scripts
 253 7
export_parser.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 234 6
train_model.py
in bio-research/skills/scvi-tools/scripts
 233 7
sarek.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 209 -
validators.py
in bio-research/skills/nextflow-development/scripts/utils
 171 8
atacseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 167 -
sample_inference.py
in bio-research/skills/nextflow-development/scripts/utils
 161 7
qc_analysis.py
in bio-research/skills/single-cell-rna-qc/scripts
 155 -
qc_plotting.py
in bio-research/skills/single-cell-rna-qc/scripts
 153 3
flatten_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 153 7
integrate_datasets.py
in bio-research/skills/scvi-tools/scripts
 135 3
rnaseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 130 -
differential_expression.py
in bio-research/skills/scvi-tools/scripts
 129 3
transfer_labels.py
in bio-research/skills/scvi-tools/scripts
 125 3
cluster_embed.py
in bio-research/skills/scvi-tools/scripts
 111 3
genomes.yaml
in bio-research/skills/nextflow-development/scripts/config
 108 -
file_discovery.py
in bio-research/skills/nextflow-development/scripts/utils
 101 5
prepare_data.py
in bio-research/skills/scvi-tools/scripts
 87 2
qc_core.py
in bio-research/skills/single-cell-rna-qc/scripts
 80 6
package_data_skill.py
in data/skills/data-context-extractor/scripts
 68 3
__init__.py
in bio-research/skills/nextflow-development/scripts/utils
 47 -
Files Not Recently Changed (Top 33)
File# lines# unitscreatedlast modified# changes
(days)		# contributorsfirst
contributor		latest
contributor
detect_data_type.py
in bio-research/skills/nextflow-development/scripts
 201 6 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
check_environment.py
in bio-research/skills/nextflow-development/scripts
 348 9 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
external-pr-scope.js
in .github/scripts
 99 7 2026-07-01 2026-07-01 1 1 bthompson@anthropic.com bthompson@anthropic.com
dashboard.html
in productivity/skills
 2689 - 2026-08-07 2026-08-07 1 1 jakemarsh@anthropic.com jakemarsh@anthropic.com
artifact-example.html
in small-business/shared/reference
 295 - 2026-09-15 2026-09-15 1 1 tobin.south@gmail.com tobin.south@gmail.com
__init__.py
in bio-research/skills/nextflow-development/scripts/utils
 47 -
package_data_skill.py
in data/skills/data-context-extractor/scripts
 68 3
qc_core.py
in bio-research/skills/single-cell-rna-qc/scripts
 80 6
prepare_data.py
in bio-research/skills/scvi-tools/scripts
 87 2
file_discovery.py
in bio-research/skills/nextflow-development/scripts/utils
 101 5
genomes.yaml
in bio-research/skills/nextflow-development/scripts/config
 108 -
cluster_embed.py
in bio-research/skills/scvi-tools/scripts
 111 3
transfer_labels.py
in bio-research/skills/scvi-tools/scripts
 125 3
differential_expression.py
in bio-research/skills/scvi-tools/scripts
 129 3
rnaseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 130 -
integrate_datasets.py
in bio-research/skills/scvi-tools/scripts
 135 3
flatten_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 153 7
qc_plotting.py
in bio-research/skills/single-cell-rna-qc/scripts
 153 3
qc_analysis.py
in bio-research/skills/single-cell-rna-qc/scripts
 155 -
sample_inference.py
in bio-research/skills/nextflow-development/scripts/utils
 161 7
atacseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 167 -
validators.py
in bio-research/skills/nextflow-development/scripts/utils
 171 8
sarek.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 209 -
train_model.py
in bio-research/skills/scvi-tools/scripts
 233 7
export_parser.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 234 6
validate_adata.py
in bio-research/skills/scvi-tools/scripts
 253 7
generate_samplesheet.py
in bio-research/skills/nextflow-development/scripts
 288 10
model_utils.py
in bio-research/skills/scvi-tools/scripts
 319 10
manage_genomes.py
in bio-research/skills/nextflow-development/scripts
 368 9
convert_to_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 386 11
ncbi_utils.py
in bio-research/skills/nextflow-development/scripts/utils
 509 16
sra_geo_fetch.py
in bio-research/skills/nextflow-development/scripts
 511 11
validate_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 815 24
Most Recently Created Files (Top 33)
File# lines# unitscreatedlast modified# changes
(days)		# contributorsfirst
contributor		latest
contributor
validate_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 815 24
sra_geo_fetch.py
in bio-research/skills/nextflow-development/scripts
 511 11
ncbi_utils.py
in bio-research/skills/nextflow-development/scripts/utils
 509 16
convert_to_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 386 11
manage_genomes.py
in bio-research/skills/nextflow-development/scripts
 368 9
model_utils.py
in bio-research/skills/scvi-tools/scripts
 319 10
generate_samplesheet.py
in bio-research/skills/nextflow-development/scripts
 288 10
validate_adata.py
in bio-research/skills/scvi-tools/scripts
 253 7
export_parser.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 234 6
train_model.py
in bio-research/skills/scvi-tools/scripts
 233 7
sarek.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 209 -
validators.py
in bio-research/skills/nextflow-development/scripts/utils
 171 8
atacseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 167 -
sample_inference.py
in bio-research/skills/nextflow-development/scripts/utils
 161 7
qc_analysis.py
in bio-research/skills/single-cell-rna-qc/scripts
 155 -
qc_plotting.py
in bio-research/skills/single-cell-rna-qc/scripts
 153 3
flatten_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 153 7
integrate_datasets.py
in bio-research/skills/scvi-tools/scripts
 135 3
rnaseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 130 -
differential_expression.py
in bio-research/skills/scvi-tools/scripts
 129 3
transfer_labels.py
in bio-research/skills/scvi-tools/scripts
 125 3
cluster_embed.py
in bio-research/skills/scvi-tools/scripts
 111 3
genomes.yaml
in bio-research/skills/nextflow-development/scripts/config
 108 -
file_discovery.py
in bio-research/skills/nextflow-development/scripts/utils
 101 5
prepare_data.py
in bio-research/skills/scvi-tools/scripts
 87 2
qc_core.py
in bio-research/skills/single-cell-rna-qc/scripts
 80 6
package_data_skill.py
in data/skills/data-context-extractor/scripts
 68 3
__init__.py
in bio-research/skills/nextflow-development/scripts/utils
 47 -
artifact-example.html
in small-business/shared/reference
 295 - 2026-09-15 2026-09-15 1 1 tobin.south@gmail.com tobin.south@gmail.com
dashboard.html
in productivity/skills
 2689 - 2026-08-07 2026-08-07 1 1 jakemarsh@anthropic.com jakemarsh@anthropic.com
external-pr-scope.js
in .github/scripts
 99 7 2026-07-01 2026-07-01 1 1 bthompson@anthropic.com bthompson@anthropic.com
check_environment.py
in bio-research/skills/nextflow-development/scripts
 348 9 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
detect_data_type.py
in bio-research/skills/nextflow-development/scripts
 201 6 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
Most Recently Changed Files (Top 33)
File# lines# unitscreatedlast modified# changes
(days)		# contributorsfirst
contributor		latest
contributor
validate_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 815 24
sra_geo_fetch.py
in bio-research/skills/nextflow-development/scripts
 511 11
ncbi_utils.py
in bio-research/skills/nextflow-development/scripts/utils
 509 16
convert_to_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 386 11
manage_genomes.py
in bio-research/skills/nextflow-development/scripts
 368 9
model_utils.py
in bio-research/skills/scvi-tools/scripts
 319 10
generate_samplesheet.py
in bio-research/skills/nextflow-development/scripts
 288 10
validate_adata.py
in bio-research/skills/scvi-tools/scripts
 253 7
export_parser.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 234 6
train_model.py
in bio-research/skills/scvi-tools/scripts
 233 7
sarek.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 209 -
validators.py
in bio-research/skills/nextflow-development/scripts/utils
 171 8
atacseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 167 -
sample_inference.py
in bio-research/skills/nextflow-development/scripts/utils
 161 7
qc_analysis.py
in bio-research/skills/single-cell-rna-qc/scripts
 155 -
qc_plotting.py
in bio-research/skills/single-cell-rna-qc/scripts
 153 3
flatten_asm.py
in bio-research/skills/instrument-data-to-allotrope/scripts
 153 7
integrate_datasets.py
in bio-research/skills/scvi-tools/scripts
 135 3
rnaseq.yaml
in bio-research/skills/nextflow-development/scripts/config/pipelines
 130 -
differential_expression.py
in bio-research/skills/scvi-tools/scripts
 129 3
transfer_labels.py
in bio-research/skills/scvi-tools/scripts
 125 3
cluster_embed.py
in bio-research/skills/scvi-tools/scripts
 111 3
genomes.yaml
in bio-research/skills/nextflow-development/scripts/config
 108 -
file_discovery.py
in bio-research/skills/nextflow-development/scripts/utils
 101 5
prepare_data.py
in bio-research/skills/scvi-tools/scripts
 87 2
qc_core.py
in bio-research/skills/single-cell-rna-qc/scripts
 80 6
package_data_skill.py
in data/skills/data-context-extractor/scripts
 68 3
__init__.py
in bio-research/skills/nextflow-development/scripts/utils
 47 -
artifact-example.html
in small-business/shared/reference
 295 - 2026-09-15 2026-09-15 1 1 tobin.south@gmail.com tobin.south@gmail.com
dashboard.html
in productivity/skills
 2689 - 2026-08-07 2026-08-07 1 1 jakemarsh@anthropic.com jakemarsh@anthropic.com
external-pr-scope.js
in .github/scripts
 99 7 2026-07-01 2026-07-01 1 1 bthompson@anthropic.com bthompson@anthropic.com
check_environment.py
in bio-research/skills/nextflow-development/scripts
 348 9 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
detect_data_type.py
in bio-research/skills/nextflow-development/scripts
 201 6 2026-03-18 2026-03-26 2 2 167664334+haosenwang1018@us... bthompson@anthropic.com
Summary
  • Number of files: 33
  • Daily file updates (only one update per file and date counted): 1343
  • First update: 2026-01-30
  • Latest update: 2026-10-01
  • Days between first and latest update: 244 (34 weeks, estimated 170 working days)
  • Active days (at least one file change): 146
  • Files without commit history (ignored): 28 (6,206 lines of code)
  • Data: